Contig 001909:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS040B11+                          TGTATGATAGTCCCATCAAATACTCAGGAGCATAACGATCGAGCA
JMFS040B12+                                               ACTCAGGAGCATAACGATCGAGCA
                      ____________________________________________________________
consensus                            TGTATGATAGTCCCATCAAATACTCAGGAGCATAACGATCGAGCA
 
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JMFS040B11+           CCGAGATATCAATATCGAGCAACTTGGTATCGAAAGGACTTATATTCACGTCACACTGGC
JMFS040B12+           CCGAGATATCAATATCGAGCAACTTGGTATCGAAAGGACTTATATTCACGTCACACTGGC
                      ____________________________________________________________
consensus             CCGAGATATCAATATCGAGCAACTTGGTATCGAAAGGACTTATATTCACGTCACACTGGC
 
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JMFS040B11+           TAGGGGTATCATACAATCCCATCGAAAACAAAACATCCCTCGGAATGTATGAACTGTGAA
JMFS040B12+           TAGGGGTATCATACAATCCCATCGAAAACAAAACATCCCTCGGAATGTATGAACTGTGAA
                      ____________________________________________________________
consensus             TAGGGGTATCATACAATCCCATCGAAAACAAAACATCCCTCGGAATGTATGAACTGTGAA
 
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JMFS040B11+           CTTTAAGGAACTCCTCTCGCCTACGAATTTCCGCTTCCCTCTTGGTCGCGAGCCGTTCAG
JMFS040B12+           CTTTAAGGAACTCCTCTCGCCTACGAATTTCCGCTTCCCTCTTGGTCGCGAGCCGTTCAG
                      ____________________________________________________________
consensus             CTTTAAGGAACTCCTCTCGCCTACGAATTTCCGCTTCCCTCTTGGTCGCGAGCCGTTCAG
 
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JMFS040B11+           CCAATTGTCCCGCCATCCCCATATAGAGCTTCATCGAAGCTTTCCTTCTTACAACCTCCG
JMFS040B12+           CCAATTGTCCCGCCATCCCCATATAGAGCTTCATCGAAGCTTTCCTTCTTACAACCTCCG
                      ____________________________________________________________
consensus             CCAATTGTCCCGCCATCCCCATATAGAGCTTCATCGAAGCTTTCCTTCTTACAACCTCCG
 
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JMFS040B11+           CAAGGCACGCTCTATATGCAGGACCGATTCCACGAACCACTCTAAGGTGTTCAAAAAGAT
JMFS040B12+           CAAGGCACGCTCTATATGCAGGACCGATTCCACGAACCACTCTAAGGTGTTCAAAAAGAT
                      ____________________________________________________________
consensus             CAAGGCACGCTCTATATGCAGGACCGATTCCACGAACCACTCTAAGGTGTTCAAAAAGAT
 
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JMFS040B11+           CACTCTGACGCTTCAAAGCCTCCTGGAAGACGGAGAATTTGCACCGTATATCCTTGATCA
JMFS040B12+           CACTCTGACGCTTCAAAGCCTCCTGGAAGACGGAGAATTTGCACCGTATATCCTTGATCA
                      ____________________________________________________________
consensus             CACTCTGACGCTTCAAAGCCTCCTGGAAGACGGAGAATTTGCACCGTATATCCTTGATCA
 
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JMFS040B11+           TATACTGGATATATGCTATCTTTTGCATATAATTATGCACAAATAGGTTCGTTTCGTTCT
JMFS040B12+           TATACTGGATATATGCTATCTTTTGCATATAATTATGCACAAATAGGTTCGTTTCGTTCT
                      ____________________________________________________________
consensus             TATACTGGATATATGCTATCTTTTGCATATAATTATGCACAAATAGGTTCGTTTCGTTCT
 
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JMFS040B11+           TTTTATCCTTGCAGAAATCAAGCAAACCCGTGATTCTTCGATCACAATCCTGCATCTTGC
JMFS040B12+           TTTTATCCTTGCAGAAATCAAGCAAACCCGTGATTCTTCGATCACAATCCTGCATCTTGC
                      ____________________________________________________________
consensus             TTTTATCCTTGCAGAAATCAAGCAAACCCGTGATTCTTCGATCACAATCCTGCATCTTGC
 
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JMFS040B11+           GGAGATAAATTTTCTCGTGGCTTTCGTACATGGGACCCAAGGCAGAAACCGCATCATGAG
JMFS040B12+           GGAGATAAATTTTCTCGTGGCTTTCGTACATGGGACCCAAGGCAGAAACCGCATCATGAG
                      ____________________________________________________________
consensus             GGAGATAAATTTTCTCGTGGCTTTCGTACATGGGACCCAAGGCAGAAACCGCATCATGAG
 
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JMFS040B11+           GACGAAGAGAGGATGACGACTGGCCAGTGAGGCAATCATCCACGAGCCTTTT        
JMFS040B12+           GACGAAGAGAGGATGACGACTGGCCAGTGAGGCAATCATCCACGAGCCTTTTTACCATAT
                      ____________________________________________________________
consensus             GACGAAGAGAGGATGACGACTGGCCAGTGAGGCAATCATCCACGAGCCTTTTTACCATAT