| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS029H06 | Sequence | 613 | 001903 (6) | ref|XP_006353432.1| | 7e-38 | PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum] | |||||
| JMFS148H05 | Sequence | 626 | 001903 (6) | ref|XP_006353433.1| | 6e-52 | PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum] | |||||
| JMSF002B16 | Sequence | 278 | 001903 (6) | 770 | 014087 (4) | ref|XP_004240914.1| | 253 | PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum] | |||
| JMSF020B09 | Sequence | 637 | 001903 (6) | ref|XP_009799471.1| | 185 | PREDICTED: uncharacterized protein LOC104245548 [Nicotiana sylvestris] | 755 | 014087 (4) | ref|XP_006353432.1| | 6e-102 | PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum] |
| JMSF043J10 | Sequence | 715 | 001903 (6) | ref|XP_006353433.1| | 7e-52 | PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum] | 735 | 014087 (4) | ref|XP_004240914.1| | 228 | PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum] |
| JMSF047N07 | Sequence | 654 | 001903 (6) | ref|XP_006353433.1| | 3e-52 | PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum] | 719 | 014087 (4) | ref|XP_006353432.1| | 1e-92 | PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS148H05+ CGACCTCAATGCCCTAACCTCTTCTTCTCCCAGTCC
JMSF047N07+ CTCCAAGGGACTTCAACATCGACTTCAATGCCCTAACCTCTTCTTCTCCCAGTCC
JMSF043J10+ GTCC
____________________________________________________________
consensus CTCCAAGGGACTTCAACATCGACTTCAATGCCCTAACCTCTTCTTCTCCCAGTCC
. : . : . : . : . : . :
JMFS148H05+ AAGGCCTACNCCGCCGCCGCCGCCTTCATTCACCTCCCATTTCTCAATCATCTCAGCCAA
JMSF047N07+ AAGGCCTACCCCGCCGCCGCCGCCTTCATTCACCTCCCATTTCTCAATCATCTCAGCCAA
JMSF020B09+ TCTCAGCCAA
JMSF043J10+ AAGGCCTACCCCGCCGCCGCCGCCTTCATTCACCTCCCATTTCTCAATCATCTCAGCCAA
____________________________________________________________
consensus AAGGCCTACCCCGCCGCCGCCGCCTTCATTCACCTCCCATTTCTCAATCATCTCAGCCAA
. : . : . : . : . : . :
JMFS148H05+ AGCATAGAGCGCGCTCTTGAGCGAACTCCGAGCTGAGTCAAACTCGCCGCCGAATTCCCC
JMSF047N07+ AGCATAGAGCGCGCTCTTGAGCGAACTCCGAGCTGAGTCAAACTCGCCGCCGAATTCCCC
JMSF020B09+ AGCATAGAGCGCGCTCTTGAGCGAACTCCGAGCTGAGTCAAACTCGCCGCCGAATTCCCC
JMSF043J10+ AGCATAGAGCGCGCTCTTGAGCGAACTCCGAGCTGAGTCAAACTCGCCGCCGAATTCCCC
JMFS029H06+ CCGCCGAATTCCCN
____________________________________________________________
consensus AGCATAGAGCGCGCTCTTGAGCGAACTCCGAGCTGAGTCAAACTCGCCGCCGAATTCCCC
. : . : . : . : . : . :
JMFS148H05+ CAATACATGCTCCTGGCCAGCAGCCACCAAACACTTAAGCAAAAACACTTCATATTTATC
JMSF047N07+ CAATACATGCTCCTGGCCAGCAGCCACCAAACACTTAAGCAAAAACACTTCATATTTATC
JMSF020B09+ CAATACATGCTCCTGGCCAGCAGCCACCAAACACTTAAGCAAAAACACTTCATATTTATC
JMSF043J10+ CAATACATGCTCCTGGCCAGCAGCCACCAAACACTTAAGCAAAAACACTTCATATTTATC
JMFS029H06+ CAATACATGCTCCTGGCCAGCAGCCACCAAACACTTAAGCAAAAACACTTCATATTTATC
____________________________________________________________
consensus CAATACATGCTCCTGGCCAGCAGCCACCAAACACTTAAGCAAAAACACTTCATATTTATC
. : . : . : . : . : . :
JMFS148H05+ CAAATTCAACACCCCTAGAAACCTGGAGAAGCCACTATGCCGGGAGTAGAAAAACGACTT
JMSF047N07+ CAAATTCAACACCCCTAGAAACCTGGAGAAGCCACTATGCCGGGAGTAGAAAAACGACTT
JMSF020B09+ CAAATTCAACACCCCTAGAAACCTGGAGAAGCCACTATGCCGGGAGTAGAAAAACGACTT
JMSF043J10+ CAAATTCAACACCCCTAGAAACCTGGAGAAGCCACTATGCCGGGAGTAGAAAAACGACTT
JMFS029H06+ CAAATTCAACACCCCTAGAAACCTGGAGAAGCCACTATGCCGGGAGTAGAAAAACGACTT
____________________________________________________________
consensus CAAATTCAACACCCCTAGAAACCTGGAGAAGCCACTATGCCGGGAGTAGAAAAACGACTT
. : . : . : . : . : . :
JMFS148H05+ CACACGAGAATCGGAGTCCACTACTCTAATCCTCCCATCCAAACTCGCACAATCAGAAAT
JMSF047N07+ CACACGAGAATCGGAGTCCACTACTCTAATCCTCCCATCCAAACTCGCACAATCAGAAAT
JMSF020B09+ CACACGAGAATCGGAGTCCACTACTCTAATCCTCCCATCCAAACTCGCACAATCAGAAAT
JMSF043J10+ CACACGAGAATCGGAGTCCACTACTCTAATCCTCCCATCCAAACTCGCACAATCAGAAAT
JMFS029H06+ CACACGAGAATCGGAGTCCACTACTCTAATCCTCCCATCCAAACTCGCACAATCAGAAAT
____________________________________________________________
consensus CACACGAGAATCGGAGTCCACTACTCTAATCCTCCCATCCAAACTCGCACAATCAGAAAT
. : . : . : . : . : . :
JMFS148H05+ CCTCGACCTCAGAGCCTTCAGCCTACCAATTTCCTTGTGGAAGTCGAAGTCCGGCGCCGG
JMSF047N07+ CCTCGACCTCAGAGCCTTCAGCCTACCAATTTCCTTGTGGAAGTCGAAGTCCGGCGCCGG
JMSF020B09+ CCTCGACCTCAGAGCCTTCAGCCTACCAATTTCCTTGTGGAAGTCGAAGTCCGGCGCCGG
JMSF043J10+ CCTCGACCTCAGAGCCTTCAGCCTACCAATTTCCTTGTGGAAGTCGAAGTCCGGCGCCGG
JMFS029H06+ CCTCGACCTCAGAGCCTTCAGCCTACCAATTTCCTTGTGGAAGTCGAAGTCCGGCGCCGG
____________________________________________________________
consensus CCTCGACCTCAGAGCCTTCAGCCTACCAATTTCCTTGTGGAAGTCGAAGTCCGGCGCCGG
. : . : . : . : . : . :
JMFS148H05+ AGGAACGTACTCTACAGGCGCGGTGGACACCCGCGAAACACCAATCGACGGCCGCGGCGA
JMSF047N07+ AGGAACGTACTCTACAGGCGCGGTGGACACCCGCGAAACACCAATCGACGGCCGCGGCGA
JMSF020B09+ AGGAACGTACTCTACAGGCGCGGTGGACACCCGCGAAACACCAATCGACGGCCGCGGCGA
JMSF043J10+ AGGAACGTACTCTACAGGCGCGGTGGACACCCGCGAAACACCAATCGACGGCCGCGGCGA
JMFS029H06+ AGGAACGTACTCTACAGGCGCGGTGGACACCCGCGAAACACCAATCGACGGCCGCGGCGA
____________________________________________________________
consensus AGGAACGTACTCTACAGGCGCGGTGGACACCCGCGAAACACCAATCGACGGCCGCGGCGA
. : . : . : . : . : . :
JMFS148H05+ CGAGAAGAGCGCCGAGGAAACGGAGCTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
JMSF047N07+ CGAGAAGAGCGCCGAGGAAACGGAGCTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
JMSF020B09+ CGAGAAGAGCGCCGAGGAAACGGAGNTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
JMSF043J10+ CGAGAAGAGCGCCGAGGAAACGGAGCTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
JMSF002B16+ GAGGAAACGGAGNTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
JMFS029H06+ CGAGAAGAGCGCCGAGGAAACGGAGCTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
____________________________________________________________
consensus CGAGAAGAGCGCCGAGGAAACGGAGCTAAGCCGCCTCGCTGCACAATTGAAGTGGCCGAA
. : . : . : . : . : . :
JMFS148H05+ GGAGGTGAACACG-AAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
JMSF047N07+ GGAGGTGAACACGAAAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
JMSF020B09+ GGAGGTGAACACG-AAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
JMSF043J10+ GGAGGTGAACACG-AAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
JMSF002B16+ GGAGGTGAACACG-AAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
JMFS029H06+ GGAGGTGAACACG-AAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
____________________________________________________________
consensus GGAGGTGAACACG-AAAGGGGAATTCAGAATCGAAGACTTGGAAGTGGAGCTGAAGAGAA
. : . : . : . : . : . :
JMFS148H05+ TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGA
JMSF047N07+ TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGAGAACACT
JMSF020B09+ TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGAGAACACTGT
JMSF043J10+ TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGAGAACACTGT
JMSF002B16+ TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGAGAACACTGT
JMFS029H06+ TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGAGAACACTGT
____________________________________________________________
consensus TGCTGGTTTGCTGAAGCACTGGAAGCGCAGGCGCCATGAAAGAGAATGAGAGAACACTGT
. : . : . : . : . : . :
JMSF020B09+ GTTTTTAGAAGCATTAACAATGGCGGATAATAAAGACTTAATAAAGCGGAGATGCTTGAA
JMSF043J10+ GTTTTTAGAAGCATTAACAATGGCGGATAATAAAGACTTAATAAAGCGGAGATGCTTGAA
JMSF002B16+ GTTTTTAGAAGCATTAACAATGGCGGATAATAAAGACTTAATAAAGCGGAGATGCTTGAA
JMFS029H06+ GTTTTTAGAAGCATTAACAATGGCGGATAATAAAGACTTAATAAAGCGGAGATGCTTGAA
____________________________________________________________
consensus GTTTTTAGAAGCATTAACAATGGCGGATAATAAAGACTTAATAAAGCGGAGATGCTTGAA
. : . : . : . : . : . :
JMSF020B09+ GCATATACGGATATACCGAGTACTTC
JMSF043J10+ GCATATACGGATATACCGAGTACTTCTTCTTGGCAGACAGGGAAGAAGTGC
JMSF002B16+ GCATATACGGATATACCGAGTACTTCTTCTTGGCAGACAGGGAAGAAGTGC
JMFS029H06+ GCATATACGGATATACCGAGTACTTCTTCTTGGCAGACAGGGAAGAAGTGCGAGTATTTA
____________________________________________________________
consensus GCATATACGGATATACCGAGTACTTCTTCTTGGCAGACAGGGAAGAAGTGCGAGTATTTA