Contig 001891:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D18Sequence567001891 (4)ref|XP_009786094.1|6e-57PREDICTED: conserved oligomeric Golgi complex subunit 1 [Nicotiana sylvestris]590019086gb|EYU18079.1|1e-12hypothetical protein MIMGU_mgv1a000581mg [Erythranthe guttata]
JMFS015B09Sequence543001891 (4)ref|XP_009594362.1|2e-67PREDICTED: conserved oligomeric Golgi complex subunit 1 [Nicotiana tomentosifor
JMFS096G09Sequence599001891 (4)ref|XP_009594362.1|2e-73PREDICTED: conserved oligomeric Golgi complex subunit 1 [Nicotiana tomentosifor
JMFS150D11Sequence627001891 (4)ref|XP_009594362.1|1e-86PREDICTED: conserved oligomeric Golgi complex subunit 1 [Nicotiana tomentosifor

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS150D11+ CTATCACGACTCCGTTGCGAGATCTGAG
                      ____________________________________________________________
consensus CTATCACGACTCCGTTGCGAGATCTGAG
 
. : . : . : . : . : . :
JMFS150D11+ CCTGAAAGTCTCCACCATCTGCCATTGGTGCTGCAGCAGAGGGAAATTCGAGAGCACATT
JMFS096G09+ CATT
                      ____________________________________________________________
consensus CCTGAAAGTCTCCACCATCTGCCATTGGTGCTGCAGCAGAGGGAAATTCGAGAGCACATT
 
. : . : . : . : . : . :
JMFS150D11+ CTTGCTCTCCGTGTTGCTGATCACGCTGCGGTGGACGAGCTTCGCACGAATGTACCGAGC
JMFF013D18+ TTGCTGATCACGCTGCGGTGGACGAGCTTCGCACGAATGTACCGAGC
JMFS096G09+ CTTGCTCTCCGTGTTGCTGATCACGCTGCGGTGGACGAGCTTCGCACGAATGTACCGAGC
JMFS015B09+ GAGC
                      ____________________________________________________________
consensus CTTGCTCTCCGTGTTGCTGATCACGCTGCGGTGGACGAGCTTCGCACGAATGTACCGAGC
 
. : . : . : . : . : . :
JMFS150D11+ AGATGACTCGAGAAACATGGATTCATCGAGGCAGCCCCAGATATTCTCCGGCGTGTCCAC
JMFF013D18+ AGATGACTCGAGAAACATGGATTCATCGAGGCAGCCCCAGATATTCTCCGGCGTGTCCAC
JMFS096G09+ AGATGACTCGAGAAACATGGATTCATCGAGGCAGCCCCAGATATTCTCCGGCGTGTCCAC
JMFS015B09+ AGATGACTCGAGAAACATGGATTCATCGAGGCAGCCCCAGATATTCTCCGGCGTGTCCAC
                      ____________________________________________________________
consensus AGATGACTCGAGAAACATGGATTCATCGAGGCAGCCCCAGATATTCTCCGGCGTGTCCAC
 
. : . : . : . : . : . :
JMFS150D11+ CAGGTACTTGACTCGACACGCAATGCCGTACATTCGAGACTTTGCATGGTCAATTGACTT
JMFF013D18+ CAGGTACTTGACTCGACACGCAATGCCGTACATTCGAGACTTTGCATGGTCAATTGACTT
JMFS096G09+ CAGGTACTTGACTCGACACGCAATGCCGTACATTCGAGACTTTGCATGGTCAATTGACTT
JMFS015B09+ CAGGTACTTGACTCGACACGCAATGCCGTACATTCGAGACTTTGCATGGTCAATTGACTT
                      ____________________________________________________________
consensus CAGGTACTTGACTCGACACGCAATGCCGTACATTCGAGACTTTGCATGGTCAATTGACTT
 
. : . : . : . : . : . :
JMFS150D11+ GGGGGAATCGGAGGCCGTGGCAGAGGAGAGGGAGTGAAGAATGCCGCGGTGGATGGCGGA
JMFF013D18+ GGGGGAATCGGAGGCCGTGGCAGAGGAGAGGGAGTGAAGAATGCCGCGGTGGATGGCGGA
JMFS096G09+ GGGGGAATCGGAGGCCGTGGCAGAGGAGAGGGAGTGAAGAATGCCGCGGTGGATGGCGGA
JMFS015B09+ GGGGGAATTGGAGGCCGTGGCAGAGGAGAGGGAGTGAAGAATGCCGCGGTGGATGGCGGA
                      ____________________________________________________________
consensus GGGGGAATCGGAGGCCGTGGCAGAGGAGAGGGAGTGAAGAATGCCGCGGTGGATGGCGGA
 
. : . : . : . : . : . :
JMFS150D11+ GATGTTTGCGGAAATGGACTCGCACGAGGCCTTCATCAA-CACTATCGAGTCGGCGGAAT
JMFF013D18+ GATGTTTGCGGAAATGGACTCGCACGAGGCCTTCATCAACCACTATCGAGTCGGCGGAAT
JMFS096G09+ GATGTTTGCGGAAATGGACTCGCACGAGGCCTTCATCAA-CACTATCGAGTCGGCGGAAT
JMFS015B09+ GATGTTTGCGGAAATGGACTCGCACGAGGCCTTCATCAA-CACTATCGAGTCGGCGGAAT
                      ____________________________________________________________
consensus GATGTTTGCGGAAATGGACTCGCACGAGGCCTTCATCAA-CACTATCGAGTCGGCGGAAT
 
. : . : . : . : . : . :
JMFS150D11+ CGATGAGATCGCGGTAGCGGTTGCCGACCAGCTGCCGGAGCTCTTCGCTCTTGTCCTGGA
JMFF013D18+ CGATGAGATCGCGGTAGCGGTTGCCGACCAGCTGCCGGAGCTCTTCGCTCTTGTCCTGGA
JMFS096G09+ CGATGAGATCGCGGTAGCGGTTGCCGACCAGCTGCCGGAGCTCTTCGCTCTTGTCCTGGA
JMFS015B09+ CGATGAGATCGCGGTAGCGGTTGCCGACCAGCTGCCGGAGCTCTTCGCTCTTGTCCTGGA
                      ____________________________________________________________
consensus CGATGAGATCGCGGTAGCGGTTGCCGACCAGCTGCCGGAGCTCTTCGCTCTTGTCCTGGA
 
. : . : . : . : . : . :
JMFS150D11+ TCTGCCTCCTCGTGGCGATCTCCACATTCCGGATTTCGGCAATAGGCTTCGTGCGAAAGA
JMFF013D18+ TCTGCCTCCTCGTGGCGATCTCCACATTCCGGATTTCGGCAATAGGCTTCGTGCGAAAGA
JMFS096G09+ TCTGCCTCCTCGTGGCGATCTCCACATTCCGGATTTCGGCAATAGGCTTCGTGCGAAAGA
JMFS015B09+ TCTGCCTCCTCGTGGCGATCTCCACATTCCGGATTTCGGCAATAGGCTTCGTGCGAAAGA
                      ____________________________________________________________
consensus TCTGCCTCCTCGTGGCGATCTCCACATTCCGGATTTCGGCAATAGGCTTCGTGCGAAAGA
 
. : . : . : . : . : . :
JMFS150D11+ GCAATTCCGCGTCTTGCTGGTGGCTTCTCAATCCGCCTCCGGCACCACCGGACGACGATG
JMFF013D18+ GCAATTCCGCGTCTTGCTGGTGGCTTCTCAATCCGCCTCCGGCACCACCGGACGACGATG
JMFS096G09+ GCAATTCCGCGTCTTGCTGGTGGCTTCTCAATCCGCCTCCGGCACCACCGGACGACGATG
JMFS015B09+ GCAATTCCGCGTCTTGCTGGTGGCTTCTCAATCCGCCTCCGGCACCACCGGACGACGATG
                      ____________________________________________________________
consensus GCAATTCCGCGTCTTGCTGGTGGCTTCTCAATCCGCCTCCGGCACCACCGGACGACGATG
 
. : . : . : . : . : . :
JMFS150D11+ GCGGTGGCGCCGATCCTACACTCATAATTGCTACAGTAGTGTTCAATGTAATTAAGCAGA
JMFF013D18+ GTGGTGGCGCCGATCCTACACTCATAATTGCTACAGTAGTGTTCAATGTAATTAAGCAGA
JMFS096G09+ GCGGTGGCGCCGATCCTACACTCATAATTGCTACAGTAGTGTTCAATGTAATTAAGCAGA
JMFS015B09+ GCGGTGGCGCCGATCCTACACTCATAATTGCTACAGTAGTGTTCAATGTAATTAAGCAGA
                      ____________________________________________________________
consensus GCGGTGGCGCCGATCCTACACTCATAATTGCTACAGTAGTGTTCAATGTAATTAAGCAGA
 
. : . : . : . : . : . :
JMFF013D18+ GAAGTATCAGTCGCTACTCCCCTCTGATGCAGAAGAATCT
JMFS096G09+ GAAGTATCAGTCGCTACTCCCCTCTGATGCAGAAGAATCTGCTCTTGAATTAACAA
JMFS015B09+ GAAGTATCAGTCGCTACTCCCCTCTGATGCAGAAGAATCTGCTCTTGAATTAACAAGGGA
                      ____________________________________________________________
consensus GAAGTATCAGTCGCTACTCCCCTCTGATGCAGAAGAATCTGCTCTTGAATTAACAAGGGA