Contig 001890:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS013H09Sequence579001890 (4)ref|XP_009602491.1|3e-22PREDICTED: serine/threonine-protein kinase pakF {ECO:0000250|UniProtKB:Q869N2}-l
JMFS014G08Sequence561001890 (4)ref|XP_009602491.1|2e-30PREDICTED: serine/threonine-protein kinase pakF {ECO:0000250|UniProtKB:Q869N2}-l
JMFS053A12Sequence515001890 (4)ref|XP_009602491.1|6e-13PREDICTED: serine/threonine-protein kinase pakF {ECO:0000250|UniProtKB:Q869N2}-l
JMFS151A08Sequence579001890 (4)ref|XP_009602491.1|8e-32PREDICTED: serine/threonine-protein kinase pakF {ECO:0000250|UniProtKB:Q869N2}-l

Alignment

This contig is upended


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JMFS151A08+            CGACACCACAGCTTTCGCCGCCGTCATCGCCTCTATACACGTCTTTACTACTACTCTCC
JMFS014G08+                               GCCGTCATCGCCTCTATACACGTCTTTACTACTACTCTCC
                      ____________________________________________________________
consensus              CGACACCACAGCTTTCGCCGCCGTCATCGCCTCTATACACGTCTTTACTACTACTCTCC
 
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JMFS151A08+           CTCTGCAGCGGAGAAGAATGTCGAAATGAGGCAGAACCCCTTTTCCACACAGCCATAGCG
JMFS014G08+           CTCTGCAGCGGAGAAGAATGTCGAAATGAGGCAGAACCCCTTTTCCACACAGCCATAGCG
JMFS053A12+                                         GCAGAACCCCTTTTCCACACAGCCATAGCG
JMFS013H09+                                CGAAATGAGGCAGAACCCCTTTTCCACACAGCCATAGCG
                      ____________________________________________________________
consensus             CTCTGCAGCGGAGAAGAATGTCGAAATGAGGCAGAACCCCTTTTCCACACAGCCATAGCG
 
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JMFS151A08+           CCACCCTCAAATCCACCATGCCTTCCGCCGCCACCAAGCTTCAACCGCCGCGGCCGTTGC
JMFS014G08+           CCACCCTCAAATCCACCATGCCTTCCGCCGCCACCAAGCTTCAACCGCCGCGGCCGTTGC
JMFS053A12+           CCACCCTCAAATCCACCATGCCTTCCGCCGTCANCAAGTTTCAACCGCCGCGGCCGTTGN
JMFS013H09+           CCACCCTCAAATCCACCATGCCTTCCGCCGCCACCAAGCTTCAACCGCCGCGGCCGTTGC
                      ____________________________________________________________
consensus             CCACCCTCAAATCCACCATGCCTTCCGCCGCCACCAAGCTTCAACCGCCGCGGCCGTTGC
 
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JMFS151A08+           GGGGAGATAGAGTGTGACCTTTGTCTCTCTGATCTGTAATCGTTCGAAACCATGAGCTTC
JMFS014G08+           GGGGAGATAGAGTGTGACCTTTGTCTCTCTGATCTGTAATCGTTCGAAACCATGAGCTTC
JMFS053A12+           GGGGAGATAGAGTGTGACCTTTGTCTCTCTGATCTGTAATCGTTCGAAACCATGAGCTTC
JMFS013H09+           GGGGAGATAGAGTGTGACCTTTGTCTCTCTGATCTGTAATCGTTCGAAACCATGAGCTTC
                      ____________________________________________________________
consensus             GGGGAGATAGAGTGTGACCTTTGTCTCTCTGATCTGTAATCGTTCGAAACCATGAGCTTC
 
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JMFS151A08+           GACATCTCCTCTTTCAAGCGCGCATGCCCTGCCTCCAGCTCCTGGATCTTCTTTAGCAGC
JMFS014G08+           GACATCTCCTCTTTCAAGCGCGCATGCCCTGCCTCCAGCTCCTGGATCTTCTTTAGCAGC
JMFS053A12+           GACATCTCCTCTTTCAAGCGCGCATGCCCTGCCTCCAGCTCCNGGATCTTCTTTAGCAGC
JMFS013H09+           GACATCTCCTCTTTCAAGCGCGCATGCCCTGCCTCCAGCTCCTGGATCTTCTTTAGCAGC
                      ____________________________________________________________
consensus             GACATCTCCTCTTTCAAGCGCGCATGCCCTGCCTCCAGCTCCTGGATCTTCTTTAGCAGC
 
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JMFS151A08+           TCCTCCGCTGGCGGTACCTGTGACGGCGGCTCAGCTGATGCTGTTGTATTTTCCATTGCA
JMFS014G08+           TCCTCCGCTGGCGGTACCTGTGACGGCGGCTCAGCTGATGCTGTTGTATTTTCCATTGCA
JMFS053A12+           TCTTCCGCTGGCGGTACCTGTGACGGCGGCTCAGCTGATGCTGTTGTATTTTCCANTGCA
JMFS013H09+           TCCTCCGCTGGCGGTACCTGTGACGGCGGCTCAGCTGATGCTGTTGTATTTTCCATTGCA
                      ____________________________________________________________
consensus             TCCTCCGCTGGCGGTACCTGTGACGGCGGCTCAGCTGATGCTGTTGTATTTTCCATTGCA
 
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JMFS151A08+           ATTCGACTTTAAAAAAAAAAAAAAAATCAAAATTCCACCGAGCTAATATTCTCTATATCC
JMFS014G08+           ATTCGACTTTAAAAAAAAAAAAAAAATCAAAATTCCACCGAGCTAATATTCTCTATATCC
JMFS053A12+           ATTCGACTTT-AAAAAAAAAAAAAAATCAAAATTCCACCGAGCTAATATTCTCTATATCC
JMFS013H09+           ATTCGACTTTAAAAAAAAAAAAAAAATCAAAATTCCACCGAGCTAATATTCTCTATATCC
                      ____________________________________________________________
consensus             ATTCGACTTTAAAAAAAAAAAAAAAATCAAAATTCCACCGAGCTAATATTCTCTATATCC
 
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JMFS151A08+           AAGTTGACTCTCTTCTCTCGCCCCCTCGCTACACATATTTATGGAAGAATTGATTGAATG
JMFS014G08+           AAGTTGACTCTCTTCTCTCGCCCCCTCGCTACACATATTTATGGAAGAATTGATTGAATG
JMFS053A12+           AAGTTGACTCTCTTCTCTCGCCCCCTCGCTACACATATTTATGGAAGAATTGATTGAATG
JMFS013H09+           AAGTTGACTCTCTTCTCTCGCCCCCTCGCTACACATATTTATGGAAGAATTGATTGAATG
                      ____________________________________________________________
consensus             AAGTTGACTCTCTTCTCTCGCCCCCTCGCTACACATATTTATGGAAGAATTGATTGAATG
 
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JMFS151A08+           GATCTACAGCTACAATCGCTTGTGGCCTTGATTACCTATGAACAAAATTGTAGCTAAAAT
JMFS014G08+           GATCTACAGCTACAATCGCTTGTGGCCTTGATTACCTATGAACAAAATTGTAGCTAAAAT
JMFS053A12+           GATCTACAGCTACAATCGCTTGTGGCCTTGATTACCTATGAACAAAATTGTAGCTAAAAT
JMFS013H09+           GATCTACAGCTACAATCGCTTGTGGCCTTGATTACCTATGAACAAAATTGTAGCTAAAAT
                      ____________________________________________________________
consensus             GATCTACAGCTACAATCGCTTGTGGCCTTGATTACCTATGAACAAAATTGTAGCTAAAAT
 
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JMFS151A08+           GAAGAAACTGTGAGCTGAGGAAGCCGCCTTTTTGCGATTT                    
JMFS014G08+           GAAGAAACTGTGAGCTGAGGAAGCCGCCTTTTTGCGATTT                    
JMFS053A12+           GAAGAAACTGTGAGCTGAGGAAGCCGCCCTTTTGCGATTT                    
JMFS013H09+           GAAGAAACTGTGAGCTGAGGAAGCCGCCTTTTTGCGATTTXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus             GAAGAAACTGTGAGCTGAGGAAGCCGCCTTTTTGCGATTTNNNNNNNNNNNNNNNNNNNN
 
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JMFS013H09+           XXXXXXXXXXXXXXXXXXXXXXACTCGTCGTTATTCTCTGTACGCTGTAGCTTATTGCGC
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNACTCGTCGTTATTCTCTGTACGCTGTAGCTTATTGCGC