Contig 001889:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS011E05Sequence634001889 (2)gb|AAC84137.1|4e-71pyrroline-5-carboxylate synthetase [Cichorium intybus]
JMFS088G08Sequence627001889 (2)ref|XP_010324853.1|8e-98PREDICTED: delta-1-pyrroline-5-carboxylate synthase isoform X1 [Solanum lycoper

Alignment

This contig is upended


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JMFS088G08+                                           ATATGGAGCTCTCCGTGTACTAATAGCA
                      ____________________________________________________________
consensus                                             ATATGGAGCTCTCCGTGTACTAATAGCA
 
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JMFS088G08+           TCATTTTCATTAAATATAGGTATAACTTTCAGAGACAGCAATTGATTAACTGCCTCATTA
                      ____________________________________________________________
consensus             TCATTTTCATTAAATATAGGTATAACTTTCAGAGACAGCAATTGATTAACTGCCTCATTA
 
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JMFS088G08+           AGCTGACTCCTAAAGTCTGGGTCTCTGAAGTCATTATCCGTCACAAGAAGTTGAGCTGAT
JMFS011E05+                                     GAAGTCATTATCCGTCACAAGAAGTTGAGCTGAT
                      ____________________________________________________________
consensus             AGCTGACTCCTAAAGTCTGGGTCTCTGAAGTCATTATCCGTCACAAGAAGTTGAGCTGAT
 
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JMFS088G08+           GTAACATCCAGCTGACTGAACAAGGAATCATACAAAGCCATTAGGCCATTTTGCCCAACA
JMFS011E05+           GTAACATCCAGCTGACTGAACAAGGAATCATACAAAGCCATTAGGCCATTTTGCCCAACA
                      ____________________________________________________________
consensus             GTAACATCCAGCTGACTGAACAAGGAATCATACAAAGCCATTAGGCCATTTTGCCCAACA
 
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JMFS088G08+           GCTGCACAAGCCTTGCCATCAAGCTCACGTTGTGGCTTTTGAAGATCCGCAAAACTGCTG
JMFS011E05+           GCTGCACAAGCCTTGCCATCAAGCTCACGTTGTGGCTTTTGAAGATCCGCAAAACTGCTG
                      ____________________________________________________________
consensus             GCTGCACAAGCCTTGCCATCAAGCTCACGTTGTGGCTTTTGAAGATCCGCAAAACTGCTG
 
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JMFS088G08+           TGAATCAATCTCCTATATCTAAGCCTTTGTCGGCCAGCACCTACAGCACCTGAGGTAACT
JMFS011E05+           TGAATCAATCTCCTATATCTAAGCCTTTGTCGGCCAGCACCTACAGCACCTGAGGTAACT
                      ____________________________________________________________
consensus             TGAATCAATCTCCTATATCTAAGCCTTTGTCGGCCAGCACCTACAGCACCTGAGGTAACT
 
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JMFS088G08+           AAAATAACCTCATAACCCTGGGAATTGAGCTCCTGGATCTGCTCGCAGAGTGCTCCCATC
JMFS011E05+           AAAATAACCTCATAACCCTGGGAATTGAGCTCCTGGATCTGCTCGCAGAGTGCTCCCATC
                      ____________________________________________________________
consensus             AAAATAACCTCATAACCCTGGGAATTGAGCTCCTGGATCTGCTCGCAGAGTGCTCCCATC
 
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JMFS088G08+           CTTCCGAGTGCCAGTCTCCCATCCGATCTAGTGACAACTGCCGTTCCAACCTTGACGACG
JMFS011E05+           CTTCCGAGTGCCAGTCTCCCATCCGATCTAGTGACAACTGCCGTTCCAACCTTGACGACG
                      ____________________________________________________________
consensus             CTTCCGAGTGCCAGTCTCCCATCCGATCTAGTGACAACTGCCGTTCCAACCTTGACGACG
 
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JMFS088G08+           ATACGTTTAACATCCTTGACGAATGCTCGAGTTGAGTCGACGGAATCCATTGTAGAGCGA
JMFS011E05+           ATACGTTTAACATCCTTGACGAATGCTCGAGTTGAGTCGACGGAATCCATTGTAGAGCGA
                      ____________________________________________________________
consensus             ATACGTTTAACATCCTTGACGAATGCTCGAGTTGAGTCGACGGAATCCATTGTAGAGCGA
 
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JMFS088G08+           GAGCAGAGGCAAAAGCCGACGAGGCGACGGCTTGTAAAATGCGGAGACTCGGAAATGACC
JMFS011E05+           GAGCAGAGGCAAAAGCCGACGAGGCGACGGCTTGTAAAATGCGGAGACTCGGAAATGACC
                      ____________________________________________________________
consensus             GAGCAGAGGCAAAAGCCGACGAGGCGACGGCTTGTAAAATGCGGAGACTCGGAAATGACC
 
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JMFS088G08+           GGCGAATATCAAGGCGTAGGGTTTTGGGAAGCAGAGTGATATGAGAGAGAGAGAGAGAG 
JMFS011E05+           GGCGAATATCAAGGCGTAGGGTTTTGGGAAGCAGAGTGATATGAGAGAGAGAGAGAGAGG
                      ____________________________________________________________
consensus             GGCGAATATCAAGGCGTAGGGTTTTGGGAAGCAGAGTGATATGAGAGAGAGAGAGAGAGG
 
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JMFS011E05+           ATGATGGAAAGGATAGAAAAGTGATAGGGATACAGTTACGGGTATTATATCTGTGAGCTC
                      ____________________________________________________________
consensus             ATGATGGAAAGGATAGAAAAGTGATAGGGATACAGTTACGGGTATTATATCTGTGAGCTC
 
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JMFS011E05+           CGCCACTCTCGCGAAACCGCCAGGCGAGGAGGAGCGGCGGCCAAGCTTTAGTCAACACTT
                      ____________________________________________________________
consensus             CGCCACTCTCGCGAAACCGCCAGGCGAGGAGGAGCGGCGGCCAAGCTTTAGTCAACACTT