Contig 001888:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS010G05+                                                        GACTTTACTGGGCAG
                      ____________________________________________________________
consensus                                                          GACTTTACTGGGCAG
 
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JMFS005C05+                                      GTCGGTGTCGGGTTCGAGCTGAAGCCGGACGAT
JMFS010G05+           CCATTCTCCGGTGCTCCGGCTACTCAAGTCGGTGTCGGGTTCGAGCTGAAGCCGGACGAT
                      ____________________________________________________________
consensus             CCATTCTCCGGTGCTCCGGCTACTCAAGTCGGTGTCGGGTTCGAGCTGAAGCCGGACGAT
 
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JMFS005C05+           TGTGTTGTCATCAGGCTGGAGCTTGTCGAAGCTCGGGGCTAAGACGTTGTGGACCCACTC
JMFS010G05+           TGTGTTGTCATCAGGCTGGAGCTTGTCGAAGCTCGGGGCTAAGACGTTGTGGACCCACTC
                      ____________________________________________________________
consensus             TGTGTTGTCATCAGGCTGGAGCTTGTCGAAGCTCGGGGCTAAGACGTTGTGGACCCACTC
 
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JMFS005C05+           GTCGAGGCTCGTTTGGCNCCGCCACAGCCCCGCTAGGATCCTGTCTACTACCTCTTCTTC
JMFS010G05+           GTCGAGGCTCGTTTGGCCCCGCCACAGCCCCGCTAGGATCCTGTCTACTACCTCTTCTTC
                      ____________________________________________________________
consensus             GTCGAGGCTCGTTTGGCCCCGCCACAGCCCCGCTAGGATCCTGTCTACTACCTCTTCTTC
 
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JMFS005C05+           CACTTGTATCACAACCTTGTCTTCGACGACTAAGGACGAGATCGTCTTCTTGATTTTACG
JMFS010G05+           CACTTGTATCACAACCTTGTCTTCGACGACTAAGGACGAGATCGTCTTCTTGATTTTACG
                      ____________________________________________________________
consensus             CACTTGTATCACAACCTTGTCTTCGACGACTAAGGACGAGATCGTCTTCTTGATTTTACG
 
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JMFS005C05+           ACGAAGCAAGGCGAAGTCGATGGGCTTGAACACGATGAGGTCGTCTGCAGCATTTACGAG
JMFS010G05+           ACGAAGCAAGGCGAAGTCGATGGGCTTGAACACGATGAGGTCGTCTGCAGCATTTACGAG
                      ____________________________________________________________
consensus             ACGAAGCAAGGCGAAGTCGATGGGCTTGAACACGATGAGGTCGTCTGCAGCATTTACGAG
 
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JMFS005C05+           CTCGTGGGGGACGGATGTGATTGAGAATTGCATGTTTTCTAGCCCGAGCTCCTCTTCGTG
JMFS010G05+           CTCGTGGGGGACGGATGTGATTGAGAATTGCATGTTTTCTAGCCCGAGCTCCTCTTCGTG
                      ____________________________________________________________
consensus             CTCGTGGGGGACGGATGTGATTGAGAATTGCATGTTTTCTAGCCCGAGCTCCTCTTCGTG
 
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JMFS005C05+           CTCGATAGTGAGATCACTCGAGTTGTGTGACCCGTCGGCTCGATCATCGGCAGTGTCGGC
JMFS010G05+           CTCGATAGTGAGATCACTCGAGTTGTGTGACCCGTCGGCTCGATCATCGGCAGTGTCGGC
                      ____________________________________________________________
consensus             CTCGATAGTGAGATCACTCGAGTTGTGTGACCCGTCGGCTCGATCATCGGCAGTGTCGGC
 
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JMFS005C05+           CGCTTCGTTGAGGTCAAAACCGAGCCCCGAACCTAGCTCTTTCCTCAGTTTTGTTGGCCT
JMFS010G05+           CGCTTCGTTGAGGTCAAAACCGAGCCCCGAACCTAGCTCTTTCCTCAGTTTTGTTGGCCT
                      ____________________________________________________________
consensus             CGCTTCGTTGAGGTCAAAACCGAGCCCCGAACCTAGCTCTTTCCTCAGTTTTGTTGGCCT
 
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JMFS005C05+           GTCTTCGTCGTACAACCAGCTCGCCCCACGCTTTGTGCCCTTTTGGCCTATTGCTAGTCT
JMFS010G05+           GTCTTCGTCGTACAACCAGCTCGCCCCACGCTTTGTGCCCTTTTGGCCTATTGCTAGTCT
                      ____________________________________________________________
consensus             GTCTTCGTCGTACAACCAGCTCGCCCCACGCTTTGTGCCCTTTTGGCCTATTGCTAGTCT
 
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JMFS005C05+           TAGCTGCCAATTGTTACTAGAGAGAGATGCCATCTTCTTGTCATCCATCGAGTTCTCGTT
JMFS010G05+           TAGCTGCCAATTGTTACTAGAGAGAGATGCCATCTTCTTGTCATCCATCGAGTTCTCGTT
                      ____________________________________________________________
consensus             TAGCTGCCAATTGTTACTAGAGAGAGATGCCATCTTCTTGTCATCCATCGAGTTCTCGTT