Contig 001886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS010A03Sequence631001886 (3)ref|XP_009600555.1|4e-27PREDICTED: uncharacterized protein LOC104095991 isoform X1 [Nicotiana tomentosi
JMFS094F03Sequence608001886 (3)ref|XP_009600555.1|2e-31PREDICTED: uncharacterized protein LOC104095991 isoform X1 [Nicotiana tomentosi
JMSF035C09Sequence644001886 (3)ref|XP_009600555.1|2e-34PREDICTED: uncharacterized protein LOC104095991 isoform X1 [Nicotiana tomentosi751016148ref|XP_009769977.1|7e-56PREDICTED: uncharacterized protein LOC104220744 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF035C09+                                  TCTGCACACCGTTATCAGAATTTGCACGCAATGCATG
                      ____________________________________________________________
consensus                                    TCTGCACACCGTTATCAGAATTTGCACGCAATGCATG
 
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JMSF035C09+           CGAAGAGCTGTCAGAGGATCCATTTCTGGAAATTCTTGAAGCTCTTTCTAGTTTTTCGTC
JMFS094F03+                                                         TCTAGTTTTTCGTC
JMFS010A03+                                       GAAATTCTTGAAGCTCTTTCTAGTTTTTCGTC
                      ____________________________________________________________
consensus             CGAAGAGCTGTCAGAGGATCCATTTCTGGAAATTCTTGAAGCTCTTTCTAGTTTTTCGTC
 
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JMSF035C09+           TTCTACAGTTTGTGGATCTCCTTGAGATGATACTGAATCGTTAACTGTCTCAGGATCAGA
JMFS094F03+           TTCTACAGTNTGTGGATCTCCTTGAGATGATACTGAATCGTTAACTGTCTCAGGATCAGA
JMFS010A03+           TTCTACAGTTTGTGGATCTCCTTGAGATGATACTGAATCGTTAACTGTCTCAGGATCAGA
                      ____________________________________________________________
consensus             TTCTACAGTTTGTGGATCTCCTTGAGATGATACTGAATCGTTAACTGTCTCAGGATCAGA
 
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JMSF035C09+           TTCCTCTTCCACTTCCTCCTTTGAATCATTTCCCTGTTCACGTGAATAACCCTCTAGTTT
JMFS094F03+           TTCCTCTTCCACTTCCTCCTTTGAATCATTTCCCTGTTCACGTGAATAACCCTCTAGTTT
JMFS010A03+           TTCCTCTTCCACTTCCTCCTTTGAATCATTTCCCTGTTCACGTGAATAACCCTCTAGTTT
                      ____________________________________________________________
consensus             TTCCTCTTCCACTTCCTCCTTTGAATCATTTCCCTGTTCACGTGAATAACCCTCTAGTTT
 
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JMSF035C09+           ATTCTTACTCTCCTTCTCAACCATTTTAACTGTTTTTGAATCTTGAATTGTATCACCAGA
JMFS094F03+           ATTCTTACTCTCCTTCTCAACCATTTTAACTGTTTTTGAATCTTGAATTGTATCACCAGA
JMFS010A03+           ATTCTTACTCTCCTTCTCAACCATTTTAACTGTTTTTGAATCTTGAATTGTATCACCAGA
                      ____________________________________________________________
consensus             ATTCTTACTCTCCTTCTCAACCATTTTAACTGTTTTTGAATCTTGAATTGTATCACCAGA
 
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JMSF035C09+           TCTATTGGCATCATCCACATAGTGTATAACCATATTTTCATAAACTTCAGGGGGTTCAGG
JMFS094F03+           TCTATTGGCATCATCCACATAGTGTATAACCATATTTTCATAAACTTCAGGGGGTTCAGG
JMFS010A03+           TCTATTGGCATCATCCACATAGTGTATAACCATATTTTCATAAACTTCAGGGGGTTCAGG
                      ____________________________________________________________
consensus             TCTATTGGCATCATCCACATAGTGTATAACCATATTTTCATAAACTTCAGGGGGTTCAGG
 
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JMSF035C09+           GCCCGTGTTTGGATCACTTACTAAAGTACGGGAGTTTGTAGGAGATGTGGCTTTAATATC
JMFS094F03+           GCCCGTGTTTGGATCACTTACTAAAGTACGGGAGTTTGTAGGAGATGTGGCTTTAATATC
JMFS010A03+           GCCCGTGTTTGGATCACTTACT-AAGTACGGGAGTTTGTAGGAGATGTGGCTTTAATATC
                      ____________________________________________________________
consensus             GCCCGTGTTTGGATCACTTACTAAAGTACGGGAGTTTGTAGGAGATGTGGCTTTAATATC
 
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JMSF035C09+           TGTTTCTTTCCCTTTCAAGATTCTGCCACCATTCTTCTCTTGTGGTTTCTGACCTTTTTT
JMFS094F03+           TGTTTCTTTCCCTTTCAAGATTCTGCCACCATTCTTCTCTTGTGGTTTCTGACCTTTTTT
JMFS010A03+           TGTTTCTTTCCCTTTCAAGATTCTGCCACCATTCTTCTCTTGTGGTTTCTGACCTTTTTT
                      ____________________________________________________________
consensus             TGTTTCTTTCCCTTTCAAGATTCTGCCACCATTCTTCTCTTGTGGTTTCTGACCTTTTTT
 
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JMSF035C09+           ATCAGGCTTTGAAGCACGCTTTATTTGATTAGTCTTTTGAACTTGCTTCCGTTCAGTTTC
JMFS094F03+           ATCAGGCTTTGAAGCACGCTTTATTTGATTAGTCTTTTGAACTTGCTTCCGTTCAGTTTC
JMFS010A03+           ATCAGGCTTTGAAGCACGCTTTATTTGATTAGTCTTTTGAACTTGCTTCCGTTCAGTTTC
                      ____________________________________________________________
consensus             ATCAGGCTTTGAAGCACGCTTTATTTGATTAGTCTTTTGAACTTGCTTCCGTTCAGTTTC
 
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JMSF035C09+           CCTCATGCTGAAAATATTTCACCTTATAAA                              
JMFS094F03+           CCTCATGCTGAAAATATTTCACCTTATAAAAGAGCAATCCTGCTTTTCCCTAGACGCAAA
JMFS010A03+           CCTCATGCTGAAAATATTTCACCTTATAAAAGAGCAATCCTGCTTTTCCCTAGACGCAAA
                      ____________________________________________________________
consensus             CCTCATGCTGAAAATATTTCACCTTATAAAAGAGCAATCCTGCTTTTCCCTAGACGCAAA
 
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JMFS094F03+           CTTCGAAAGAGATCCGACTTCAAAACGCCGCCATTTCTTCTCGTACAAAAAACGTTTCCT
JMFS010A03+           CTTCGAAAGAGATCCGACTTCAAAACGCCGCCATTTCTTCTCGTACAAAAAACGTTTCCT
                      ____________________________________________________________
consensus             CTTCGAAAGAGATCCGACTTCAAAACGCCGCCATTTCTTCTCGTACAAAAAACGTTTCCT
 
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JMFS094F03+           CTCTCTCTCTCTATCTATCTCTCTCTCTCTCTCTCCTCAATAAACAAATATGTA      
JMFS010A03+           CTCTCTCTCTCTATCTATCTCTCTCTCTCTCTCTCCTCAATAAACAAATATGTAGTTGAG
                      ____________________________________________________________
consensus             CTCTCTCTCTCTATCTATCTCTCTCTCTCTCTCTCCTCAATAAACAAATATGTAGTTGAG