Contig 001885:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF021B15+                                                                    ATC
                      ____________________________________________________________
consensus                                                                      ATC
 
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JMSF021B15+           CCGGCGCAATAATTTCTGCACCAAAGCTGAAGACCCGAGGGCTGTTTGAATCACTTTATT
JMFS008H02+                                                                     TT
                      ____________________________________________________________
consensus             CCGGCGCAATAATTTCTGCACCAAAGCTGAAGACCCGAGGGCTGTTTGAATCACTTTATT
 
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JMSF021B15+           CGAACCCACTTCACGTAGCCGACTAAGTGTGCCATCCTGACCCAGTTCATCCACCACAAA
JMFS008H02+           CGAACCCACTTCACGTAGCCGACTAAGTGTGCCATCCTGACCCAGTTCATCCACCACAAA
                      ____________________________________________________________
consensus             CGAACCCACTTCACGTAGCCGACTAAGTGTGCCATCCTGACCCAGTTCATCCACCACAAA
 
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JMSF021B15+           CTCCGATCCATTATCCAAATTCCTAATTTTCCAAGAATAGTTTTCCACCTCAGCATCATC
JMFS008H02+           CTCCGATCCATTATCCAAATTCCTAATTTTCCAAGAATAGTTTTCCACCTCAGCATCATC
                      ____________________________________________________________
consensus             CTCCGATCCATTATCCAAATTCCTAATTTTCCAAGAATAGTTTTCCACCTCAGCATCATC
 
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JMSF021B15+           TTGAGCCAGTTCAGAAGCTTCATTTGACCGGGGAGATTGAGAAAACCGACCAGAAAAGAA
JMFS008H02+           TTGAGCCAGTTCAGAAGCTTCATTTGACCGGGGAGATTGAGAAAACCGACCAGAAAAGAA
                      ____________________________________________________________
consensus             TTGAGCCAGTTCAGAAGCTTCATTTGACCGGGGAGATTGAGAAAACCGACCAGAAAAGAA
 
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JMSF021B15+           ATTGTCTTCGGAATCCGAGTTTGCCAGTACAGTTTCACCATTATCCCTAGTTCTATCATC
JMFS008H02+           ATTGTCTTCGGAATCCGAGTTTGCCAGTACAGTTTCACCATTATCCCTAGTTCTATCATC
                      ____________________________________________________________
consensus             ATTGTCTTCGGAATCCGAGTTTGCCAGTACAGTTTCACCATTATCCCTAGTTCTATCATC
 
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JMSF021B15+           CATCTTGATTTCATCAGAACATGCATCATTGAATTCATCGTTATTTGTAGTGCTCAAATC
JMFS008H02+           CATCTTGATTTCATCAGAACATGCATCATTGAATTCATCGTTATTTGTAGTGCTCAAATC
                      ____________________________________________________________
consensus             CATCTTGATTTCATCAGAACATGCATCATTGAATTCATCGTTATTTGTAGTGCTCAAATC
 
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JMSF021B15+           AGAACTCAACCCCATCCAATTCAAAAGTCTACTTCTACGTTCATCAACACTTTCTGGGTT
JMFS008H02+           AGAACTCAACCCCATCCAATTCAAAAGTCTACTTCTACGTTCATCAACACTTTCTGGGTT
                      ____________________________________________________________
consensus             AGAACTCAACCCCATCCAATTCAAAAGTCTACTTCTACGTTCATCAACACTTTCTGGGTT
 
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JMSF021B15+           CTTAGTCCAAATTTCATACCCTAAAACATCATTGGCATTCCTGGGACTAAAATTTGACTC
JMFS008H02+           CTTAGTCCAAATTTCATACCCTAAAACATCATTGGCATTCCTGGGACTAAAATTTGACTC
                      ____________________________________________________________
consensus             CTTAGTCCAAATTTCATACCCTAAAACATCATTGGCATTCCTGGGACTAAAATTTGACTC
 
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JMSF021B15+           ATAACAAGCTGAAACCGAATCAGAACTGATCTCTTCTTCTTCATGGCTATCAAAGAAGTC
JMFS008H02+           ATAACAAGCTGAAACCGAATCAGAACTGATCTCTTCTTCTTCATGGCTATCAAAGAAGTC
                      ____________________________________________________________
consensus             ATAACAAGCTGAAACCGAATCAGAACTGATCTCTTCTTCTTCATGGCTATCAAAGAAGTC
 
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JMSF021B15+           ATCTCCATCTATTGGACTACAACTTCCCATCATTCCCTAAACCAATCAAACCAAATTCCT
JMFS008H02+           ATCTCCATCTATTGGACTACAACTTCCCATCATTCCCTAAACCAATCAAACCAAATTCCT
                      ____________________________________________________________
consensus             ATCTCCATCTATTGGACTACAACTTCCCATCATTCCCTAAACCAATCAAACCAAATTCCT
 
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JMSF021B15+           CGGATTCCCCGAATTGTGTTAGAAACCTCCAGAAATC                       
JMFS008H02+           CGGATTCCCCGAATTGTGTTAGAAACCTCCAGAAATCAGCTCGTCTGAAGCTGATCTTTA
                      ____________________________________________________________
consensus             CGGATTCCCCGAATTGTGTTAGAAACCTCCAGAAATCAGCTCGTCTGAAGCTGATCTTTA