Contig 001884:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008G02Sequence624001884 (2)ref|XP_010325533.1|6e-70PREDICTED: uncharacterized protein LOC101254928 isoform X2 [Solanum lycopersicu
JMFS053G01Sequence618001884 (2)ref|XP_009617662.1|264PREDICTED: uncharacterized protein LOC104109962 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+                       GCAAATGACCGGTGTTCTGACTCTCGAGAACCGAATACTCCGCTACAA
                      ____________________________________________________________
consensus                         GCAAATGACCGGTGTTCTGACTCTCGAGAACCGAATACTCCGCTACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           GAGGAAGATAATTGGTTATCGAGAGTGGAGCCCGAATCACGAGGGTCCAGTCTTGAATGG
                      ____________________________________________________________
consensus             GAGGAAGATAATTGGTTATCGAGAGTGGAGCCCGAATCACGAGGGTCCAGTCTTGAATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           GATCTGAATGAACGTCCTTTGCAATCTCGGTGGCTTGAATACTCAAACAGAACCACCTGC
                      ____________________________________________________________
consensus             GATCTGAATGAACGTCCTTTGCAATCTCGGTGGCTTGAATACTCAAACAGAACCACCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           CACGTGAACTGCTCGATGTTCCACTAACCAACGAGCAGTACAAGAGTTCCTCGGACTCTT
                      ____________________________________________________________
consensus             CACGTGAACTGCTCGATGTTCCACTAACCAACGAGCAGTACAAGAGTTCCTCGGACTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           GGAGACTCGAGACACATATCCCCGAGTTTTCTGGTCGCAAACCAACATCATGTGAGTTGC
                      ____________________________________________________________
consensus             GGAGACTCGAGACACATATCCCCGAGTTTTCTGGTCGCAAACCAACATCATGTGAGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           GTGTTTTGTCAATAACAGAACTCCATGAATATTCTTCTGCTTCATCCAGATTTGACGGTC
                      ____________________________________________________________
consensus             GTGTTTTGTCAATAACAGAACTCCATGAATATTCTTCTGCTTCATCCAGATTTGACGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           TAAATTGCAATAAATAGCGTCCAGACTGAGTAACTGCAGAGAGAGGAAGAGGAGTAACTT
                      ____________________________________________________________
consensus             TAAATTGCAATAAATAGCGTCCAGACTGAGTAACTGCAGAGAGAGGAAGAGGAGTAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           CACCGGGCCTTAGAGGCCCAACACAAAACTGCGGTTTATGATCTCCCAAACCACATCTTC
                      ____________________________________________________________
consensus             CACCGGGCCTTAGAGGCCCAACACAAAACTGCGGTTTATGATCTCCCAAACCACATCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           TATGACGAACCCACCTCCTCTGTCGTGCATAGTTCACAGACTCGACTGGATTACAAGATT
JMFS008G02+                                               CAGACTCGACTGGATTACAAGATT
                      ____________________________________________________________
consensus             TATGACGAACCCACCTCCTCTGTCGTGCATAGTTCACAGACTCGACTGGATTACAAGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           CCGGCCACTTCAGACTTTCAACGTTCGGAGCATAAGCCCATCCGTCAGTAATTTTAACAC
JMFS008G02+           CCGGCCACTTCAGACTTTCAACGTTCGGAGCATAAGCCCATCCGTCAGTAATTTTAACAC
                      ____________________________________________________________
consensus             CCGGCCACTTCAGACTTTCAACGTTCGGAGCATAAGCCCATCCGTCAGTAATTTTAACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053G01+           AACT                                                        
JMFS008G02+           AACTGTTATCAACATGCCATTCATCAACCCATTCCCACCCTGATGGCAACCCAACTCCAG
                      ____________________________________________________________
consensus             AACTGTTATCAACATGCCATTCATCAACCCATTCCCACCCTGATGGCAACCCAACTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           AAGCCATCTCATTGAAATCCGATCCAACCCAGCCAGCAGTAGGTGTATATTTCTGAGTTT
                      ____________________________________________________________
consensus             AAGCCATCTCATTGAAATCCGATCCAACCCAGCCAGCAGTAGGTGTATATTTCTGAGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           CAAACAACTCGCAAGGAACGAATTCATAGCCATTATCGTTTTCTTCCTTCCTTTCATTAT
                      ____________________________________________________________
consensus             CAAACAACTCGCAAGGAACGAATTCATAGCCATTATCGTTTTCTTCCTTCCTTTCATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           CCGGAGCCATTGTTTCATCTGAAGTTCTCAGTTTCAACAGCAGATGCATTGTAAATTCAG
                      ____________________________________________________________
consensus             CCGGAGCCATTGTTTCATCTGAAGTTCTCAGTTTCAACAGCAGATGCATTGTAAATTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           TATCATTACGGACTGAAACCAGGGATCTTATATTCACGTATCGGTTATTTTCCATTATGG
                      ____________________________________________________________
consensus             TATCATTACGGACTGAAACCAGGGATCTTATATTCACGTATCGGTTATTTTCCATTATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           TTACTTCACTGGCAACAACGTTGTTGCCTAACCGCCAACAGGCAGCAGGTGCAGCGTAGT
                      ____________________________________________________________
consensus             TTACTTCACTGGCAACAACGTTGTTGCCTAACCGCCAACAGGCAGCAGGTGCAGCGTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           TTAGCTTCACTGTAGTCCACGGCCCTTCCCTCGTGGGACTAATCTGAATAACGCCCACTT
                      ____________________________________________________________
consensus             TTAGCTTCACTGTAGTCCACGGCCCTTCCCTCGTGGGACTAATCTGAATAACGCCCACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           TTTTCCCCTTGTCAGATGATCTCTTGCTGATTTCCGTATCCATTCGAGGGGACAAGTAAC
                      ____________________________________________________________
consensus             TTTTCCCCTTGTCAGATGATCTCTTGCTGATTTCCGTATCCATTCGAGGGGACAAGTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008G02+           ACCCACACTTTATTCTCCCGGCTGATTTCATTACTCTTTCTTCTCCAGATGCCATCGCGG
                      ____________________________________________________________
consensus             ACCCACACTTTATTCTCCCGGCTGATTTCATTACTCTTTCTTCTCCAGATGCCATCGCGG