| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014I19 | Sequence | 442 | 001874 (6) | ref|XP_009596562.1| | 3e-19 | PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Nicotiana toment | 412 | 001874 (6) | ref|XP_009596562.1| | 2e-19 | PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Nicotiana toment |
| JMFS001F07 | Sequence | 547 | 001874 (6) | ref|XP_004492183.1| | 1e-19 | PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Cicer arietinum] | |||||
| JMSF010D06 | Sequence | 309 | 001874 (6) | ref|XP_009596562.1| | 9e-20 | PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Nicotiana toment | 287 | 012536 (2) | |||
| JMSF045B08 | Sequence | 492 | 001874 (6) | ref|XP_009596562.1| | 7e-19 | PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Nicotiana toment | 449 | 001874 (6) | ref|XP_009596562.1| | 5e-19 | PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Nicotiana toment |
This contig is upended
. : . : . : . : . : . :
JMSF045B08+ TTTTTTTTTTGGCTCCGAAATTGTTTAAA
JMFS001F07+ GTTTAAA
____________________________________________________________
consensus TTTTTTTTTTGGCTCCGAAATTGTTTAAA
. : . : . : . : . : . :
JMSF045B08+ CATGATGTTCCATATTCAACATATATTATAAAACAGTGCAGACTGCAGACTAATCCCAAT
rJMSF045B08- ACATATATTATAAAACAGTGCAGACTGCAGACTAATCCCAAT
JMFF014I19+ TAATCCCAAT
JMFS001F07+ CATGATGTTCCATATTCAACATATATTATAAAACAGTGCAGACTGCAGACTAATCCCAAT
____________________________________________________________
consensus CATGATGTTCCATATTCAACATATATTATAAAACAGTGCAGACTGCAGACTAATCCCAAT
. : . : . : . : . : . :
JMSF045B08+ AAAGTTTCATTAGGTCACCACTTTCCATAAATACAGGCCAACTTGGCATCTTTTTTAGAA
rJMSF045B08- AAAGTTTCATTAGGTCACCACTTTCCATAAATACAGGCCAACTTGGCATCTTTTTTAGAA
JMFF014I19+ AAAGTTTCATTAGGTCACCACTTTCCATAAATACAGGCCAACTTGGCATCTTTTTTAGAA
rJMFF014I19- AGGTCACCACTTTCCATAAATACAGGCCAACTTGGCATCTTTTTTAGAA
JMFS001F07+ AAAGTTTCATTAGGTCACCACTTTCCATAAATACAGGCCAACTTGGCATCTTTTTTAGAA
____________________________________________________________
consensus AAAGTTTCATTAGGTCACCACTTTCCATAAATACAGGCCAACTTGGCATCTTTTTTAGAA
. : . : . : . : . : . :
JMSF045B08+ TCAATAGGAACATGGAGATTGGAAATGAGAGAGTAATGAAGTTGAAAGGAACCTTAGAAG
rJMSF045B08- TCAATAGGAACATGGAGATTGGAAATGAGAGAGTAATGAAGTTGAAAGGAACCTTAGAAG
JMFF014I19+ TCAATAGGAACATGGAGATTGGAAATGAGAGAGTAATGAAGTTGAAAGGAACCTTAGAAG
rJMFF014I19- TCAATAGGAACATGGAGATTGGAAATGAGAGAGTAATGAAGTTGAAAGGAACCTTAGAAG
JMSF010D06+ AGAAG
JMFS001F07+ TCAATAGGAACATGGAGATTGGAAATGAGAGAGTAATGAAGTTGAAAGGAACCTTAGAAG
____________________________________________________________
consensus TCAATAGGAACATGGAGATTGGAAATGAGAGAGTAATGAAGTTGAAAGGAACCTTAGAAG
. : . : . : . : . : . :
JMSF045B08+ AAAAGTTTGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
rJMSF045B08- AAAAGTTTGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
JMFF014I19+ AAAAGTTTGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
rJMFF014I19- AAAAGTTTGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
JMSF010D06+ AAAAGTTNGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
JMFS001F07+ AAAAGTTTGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
____________________________________________________________
consensus AAAAGTTTGTTTGTGTTTTATCTTTCCATGTGAACATTTCCCCAATCCAAACTCCAAGCT
. : . : . : . : . : . :
JMSF045B08+ ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
rJMSF045B08- ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
JMFF014I19+ ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
rJMFF014I19- ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
JMSF010D06+ ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
JMFS001F07+ ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
____________________________________________________________
consensus ATCAAAGGGCCTATAATTCGAGCTTGAGCTCCTCCTTTTGATCGGAGAAGTAGTGCAGGA
. : . : . : . : . : . :
JMSF045B08+ TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
rJMSF045B08- TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
JMFF014I19+ TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
rJMFF014I19- TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
JMSF010D06+ TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
JMFS001F07+ TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
____________________________________________________________
consensus TGTATGGTGCGACCCGAATAGCGACAACCCAAGCCCCGAACATACCCACGTGAGCCTTCA
. : . : . : . : . : . :
JMSF045B08+ GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
rJMSF045B08- GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
JMFF014I19+ GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
rJMFF014I19- GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
JMSF010D06+ GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
JMFS001F07+ GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
____________________________________________________________
consensus GCTGCTTCAAAGATGCAGCTTTGTTAGGTTTTCTCATGAACATCCCCGGAAACATTGTTT
. : . : . : . : . : . :
JMSF045B08+ CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTT
rJMSF045B08- CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTT
JMFF014I19+ CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTTGCCGAATCAATTCCGCGAG
rJMFF014I19- CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTTGCCGAATCAATTCCGCGAG
JMSF010D06+ CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTTGCCGAATCAATTCCGCGAG
JMFS001F07+ CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTTGCCGAATCAATTCCGCGAG
____________________________________________________________
consensus CAGCCTCTTCTTCTTCTTCTTCCCTTGTTCGATCTCCTTTTGCCGAATCAATTCCGCGAG
. : . : . : . : . : . :
JMFF014I19+ CAC
rJMFF014I19- CAC
JMSF010D06+ CAC
JMFS001F07+ CACAACAATTTGCAGTAAAAGCTAAAACCCTAAAACCCAAGCCTCCGTCGACAGTAAGGA
____________________________________________________________
consensus CACAACAATTTGCAGTAAAAGCTAAAACCCTAAAACCCAAGCCTCCGTCGACAGTAAGGA