Contig 001868:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008N01Sequence490001868 (2)
JMFN043L03Sequence530001868 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN008N01+ AGGAAGTTGCTGGACTGCTGCCTGCCGGAGTTCTTCATAGAAGTTGCCGG
JMFN043L03+ AGGAAGTTGCTGGACTGCTGCCTGCCGGAGTTCTTCATAGAAGTTGCCGG
                      ____________________________________________________________
consensus AGGAAGTTGCTGGACTGCTGCCTGCCGGAGTTCTTCATAGAAGTTGCCGG
 
. : . : . : . : . : . :
JMFN008N01+ CCGTAAATCGGCGCTGCTGGAAGTTGATGTCCAACCGCTAACGCTACCGCCTTGCCAATC
JMFN043L03+ CCGTAAATCGGCGCTGCTGGAAGTTGATGTCCAACCGCTAACGCTACCGCCTTGCCAATC
                      ____________________________________________________________
consensus CCGTAAATCGGCGCTGCTGGAAGTTGATGTCCAACCGCTAACGCTACCGCCTTGCCAATC
 
. : . : . : . : . : . :
JMFN008N01+ CGCCGACGATTCTATCCGCCACCGCTGGAGCTTTTCACCGGACGTTTTTTTTG--TTTTT
JMFN043L03+ CGCCGACGATTCTATCCGCCACCGCTGGAGCTTTTCACCGGACGTTTTTTTTGTTTTTTT
                      ____________________________________________________________
consensus CGCCGACGATTCTATCCGCCACCGCTGGAGCTTTTCACCGGACGTTTTTTTTGTTTTTTT
 
. : . : . : . : . : . :
JMFN008N01+ TTTTTTTGCTAAAGTCGTCGGAGACCGCTGCTCAGCTTCTCGCCGGAGAATGTCGCTGTA
JMFN043L03+ TTTTTTTGCTAAAGTCGTCGGAGACCGCTGCTCAGCTTCTCGCCGGAGAATGTCGCTGTA
                      ____________________________________________________________
consensus TTTTTTTGCTAAAGTCGTCGGAGACCGCTGCTCAGCTTCTCGCCGGAGAATGTCGCTGTA
 
. : . : . : . : . : . :
JMFN008N01+ GGATTGTATCGCGGAGGCTCCGTTTCTGTTTGATGCAGGTCGCCGGAGGAAGACAGGAGC
JMFN043L03+ GGATTGTATCGCGGAGGCTCCGTTTCTGTTTGATGCAGGTCGCCGGAGGAAGACAGGAGC
                      ____________________________________________________________
consensus GGATTGTATCGCGGAGGCTCCGTTTCTGTTTGATGCAGGTCGCCGGAGGAAGACAGGAGC
 
. : . : . : . : . : . :
JMFN008N01+ CTGTTATTGCCTGCTTGGGACTTCGCCGCGGTTTTGGCCGAAGTCCATCACAAAAGCCGC
JMFN043L03+ CTGTTATTGCCTGCTTGGGACTTCGCCGCGGTTTTGGCCGAAGTCCATCACAAAAGCCGC
                      ____________________________________________________________
consensus CTGTTATTGCCTGCTTGGGACTTCGCCGCGGTTTTGGCCGAAGTCCATCACAAAAGCCGC
 
. : . : . : . : . : . :
JMFN008N01+ TG--TTTTTTTTTTTTTTTTTCATGCTACTGGAAACTGACGCTGCGAGACCGGGAGCCAC
JMFN043L03+ TGXXXXXXXXXXXXXXXXXXXCATGCTACTGGAAACTGACGCTGCGAGACCGGGAGCCAC
                      ____________________________________________________________
consensus TGNNTTTTTTTTTTTTTTTTTCATGCTACTGGAAACTGACGCTGCGAGACCGGGAGCCAC
 
. : . : . : . : . : . :
JMFN008N01+ GGATGTTGGTTTCTGCTGCCGCCGTAAGTGGATCTTCGCATCAGTCGTTGCCGGCGAGAG
JMFN043L03+ GGATGTTGGTTTCTGCTGCCGCCGTAAGTGGATCTTCGCATCAGTCGTTGCCGGCGAGAG
                      ____________________________________________________________
consensus GGATGTTGGTTTCTGCTGCCGCCGTAAGTGGATCTTCGCATCAGTCGTTGCCGGCGAGAG
 
. : . : . : . : . : . :
JMFN008N01+ AGGAAAGGGCGAGAGCGAAATAAG
JMFN043L03+ AGGAAAGGGCGAGAGCGAAATAAGAAAAAAAAAGAAAACAGAAACCTATAGAACGAAGAT
                      ____________________________________________________________
consensus AGGAAAGGGCGAGAGCGAAATAAGAAAAAAAAAGAAAACAGAAACCTATAGAACGAAGAT