Contig 001868:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN008N01+                     AGGAAGTTGCTGGACTGCTGCCTGCCGGAGTTCTTCATAGAAGTTGCCGG
JMFN043L03+                     AGGAAGTTGCTGGACTGCTGCCTGCCGGAGTTCTTCATAGAAGTTGCCGG
                      ____________________________________________________________
consensus                       AGGAAGTTGCTGGACTGCTGCCTGCCGGAGTTCTTCATAGAAGTTGCCGG
 
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JMFN008N01+           CCGTAAATCGGCGCTGCTGGAAGTTGATGTCCAACCGCTAACGCTACCGCCTTGCCAATC
JMFN043L03+           CCGTAAATCGGCGCTGCTGGAAGTTGATGTCCAACCGCTAACGCTACCGCCTTGCCAATC
                      ____________________________________________________________
consensus             CCGTAAATCGGCGCTGCTGGAAGTTGATGTCCAACCGCTAACGCTACCGCCTTGCCAATC
 
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JMFN008N01+           CGCCGACGATTCTATCCGCCACCGCTGGAGCTTTTCACCGGACGTTTTTTTTG--TTTTT
JMFN043L03+           CGCCGACGATTCTATCCGCCACCGCTGGAGCTTTTCACCGGACGTTTTTTTTGTTTTTTT
                      ____________________________________________________________
consensus             CGCCGACGATTCTATCCGCCACCGCTGGAGCTTTTCACCGGACGTTTTTTTTGTTTTTTT
 
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JMFN008N01+           TTTTTTTGCTAAAGTCGTCGGAGACCGCTGCTCAGCTTCTCGCCGGAGAATGTCGCTGTA
JMFN043L03+           TTTTTTTGCTAAAGTCGTCGGAGACCGCTGCTCAGCTTCTCGCCGGAGAATGTCGCTGTA
                      ____________________________________________________________
consensus             TTTTTTTGCTAAAGTCGTCGGAGACCGCTGCTCAGCTTCTCGCCGGAGAATGTCGCTGTA
 
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JMFN008N01+           GGATTGTATCGCGGAGGCTCCGTTTCTGTTTGATGCAGGTCGCCGGAGGAAGACAGGAGC
JMFN043L03+           GGATTGTATCGCGGAGGCTCCGTTTCTGTTTGATGCAGGTCGCCGGAGGAAGACAGGAGC
                      ____________________________________________________________
consensus             GGATTGTATCGCGGAGGCTCCGTTTCTGTTTGATGCAGGTCGCCGGAGGAAGACAGGAGC
 
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JMFN008N01+           CTGTTATTGCCTGCTTGGGACTTCGCCGCGGTTTTGGCCGAAGTCCATCACAAAAGCCGC
JMFN043L03+           CTGTTATTGCCTGCTTGGGACTTCGCCGCGGTTTTGGCCGAAGTCCATCACAAAAGCCGC
                      ____________________________________________________________
consensus             CTGTTATTGCCTGCTTGGGACTTCGCCGCGGTTTTGGCCGAAGTCCATCACAAAAGCCGC
 
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JMFN008N01+           TG--TTTTTTTTTTTTTTTTTCATGCTACTGGAAACTGACGCTGCGAGACCGGGAGCCAC
JMFN043L03+           TGXXXXXXXXXXXXXXXXXXXCATGCTACTGGAAACTGACGCTGCGAGACCGGGAGCCAC
                      ____________________________________________________________
consensus             TGNNTTTTTTTTTTTTTTTTTCATGCTACTGGAAACTGACGCTGCGAGACCGGGAGCCAC
 
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JMFN008N01+           GGATGTTGGTTTCTGCTGCCGCCGTAAGTGGATCTTCGCATCAGTCGTTGCCGGCGAGAG
JMFN043L03+           GGATGTTGGTTTCTGCTGCCGCCGTAAGTGGATCTTCGCATCAGTCGTTGCCGGCGAGAG
                      ____________________________________________________________
consensus             GGATGTTGGTTTCTGCTGCCGCCGTAAGTGGATCTTCGCATCAGTCGTTGCCGGCGAGAG
 
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JMFN008N01+           AGGAAAGGGCGAGAGCGAAATAAG                                    
JMFN043L03+           AGGAAAGGGCGAGAGCGAAATAAGAAAAAAAAAGAAAACAGAAACCTATAGAACGAAGAT
                      ____________________________________________________________
consensus             AGGAAAGGGCGAGAGCGAAATAAGAAAAAAAAAGAAAACAGAAACCTATAGAACGAAGAT