Contig 001866:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN043E07Sequence642001866 (4)emb|CDO99510.1|1e-49unnamed protein product [Coffea canephora]
JMSF003J20Sequence744001866 (4)emb|CDO99510.1|2e-58unnamed protein product [Coffea canephora]
JMSF028A02Sequence687012177 (2)ref|XP_009788086.1|5e-95PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein 746001866 (4)emb|CDO99510.1|9e-77unnamed protein product [Coffea canephora]
JMSF048E14Sequence711012177 (2)ref|XP_009788086.1|3e-96PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein 764001866 (4)emb|CDO99510.1|4e-82unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF048E14+                                  GCAAAGCATAATCTGAGTGGAAACAGTATCAAAGGA
                      ____________________________________________________________
consensus                                     GCAAAGCATAATCTGAGTGGAAACAGTATCAAAGGA
 
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rJMSF048E14+          CCTATTCCCTCAGCACTTGGACTGGTGACTGCCCTAGAAATGCTGGATCTTTCGTACAAT
rJMSF028A02+              TTCCNTCAGCACTTGGACTGGTGACTGCCCTAGAAATGCTGGATCTTTCGTACAAT
rJMSF003J20+              TTCCCTCAGCACTTGGACTGGTGACTGCCCTAGAAATGCTGGATCTTTCGTACAAT
                      ____________________________________________________________
consensus             CCTATTCCCTCAGCACTTGGACTGGTGACTGCCCTAGAAATGCTGGATCTTTCGTACAAT
 
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rJMSF048E14+          TCTTTCAATGGATCTATTCCTGAAAGCCTCGGACAAT-TGACCTCATTACGAATATTAAA
rJMSF028A02+          TCTTTCAATGGATCTATTCCTGAAAGCNTCGGACAAT-TGACCTCATTACGAATATTAAA
rJMSF003J20+          TCTTTCAATGGATCTATTCCTGAAAGCCTNGGACAATNGGACCTCATTACGAATATTAAA
                      ____________________________________________________________
consensus             TCTTTCAATGGATCTATTCCTGAAAGCCTCGGACAAT-TGACCTCATTACGAATATTAAA
 
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rJMSF048E14+          TCTCAATGGAAACTCCCTCTCTGGAAGAGTTCCTGTTGCGTTGGGCGGAAGACTCTTGCA
rJMSF028A02+          TCTCAATGGAAACTCCCTCTCTGGAAGAGTTCCTGTTGCGTTGGGCGGAAGACTCTTGCA
rJMSF003J20+          TCTCAATGGAAACTCCCTNTCTGGAAGAGTTCCTGTTGCGTTGGGCGGAAGACTCTTGCA
JMFN043E07-                              TCTGGAAGAGTTCCTGTTGCGTTGGGCGGAAGACTCTTGCA
                      ____________________________________________________________
consensus             TCTCAATGGAAACTCCCTCTCTGGAAGAGTTCCTGTTGCGTTGGGCGGAAGACTCTTGCA
 
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rJMSF048E14+          TAGAGCTAGTTTCAACTTTACTGATAATGCAGGCCTCTGCGGAATTCCTGGATTGAGAAC
rJMSF028A02+          TAGAGCTAGTTTCAACTTTACTGATAATGCAGGCCTCTGCGGAATTCCTGGATTGAGAAC
rJMSF003J20+          TAGAGCTAGTTTCAACTTTACTGATAATGCAGGCCTCTGCGGAATTCCTGGATTGAGAAC
JMFN043E07-           TAGAGCTAGTTTCAACTTTACTGATAATGCAGGCCTCTGCGGAATTCCTGGATTGAGAAC
                      ____________________________________________________________
consensus             TAGAGCTAGTTTCAACTTTACTGATAATGCAGGCCTCTGCGGAATTCCTGGATTGAGAAC
 
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rJMSF048E14+          ATGTGGGCCTCACCTTTCTGTTGGAGCCAAAGTCGCTGTTGGATTTGGAGCTCTCGTGGC
rJMSF028A02+          ATGTGGGCCTCACCTTTCTGTTGGAGCCAAAGTCGCTGTTGGATTTGGAGCTCTCGTGGC
rJMSF003J20+          ATGTGGGCCTCACCTTTCTGTTGGAGCCAAAGTCGCTGTTGGATTTGGAGCTCTCGTGGC
JMFN043E07-           ATGTGGGCCTCACCTTTCTGTTGGAGCCAAAGTCGCTGTTGGATTTGGAGCTCTCGTGGC
                      ____________________________________________________________
consensus             ATGTGGGCCTCACCTTTCTGTTGGAGCCAAAGTCGCTGTTGGATTTGGAGCTCTCGTGGC
 
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rJMSF048E14+          ACTTTTGCTAATCGCAACATGCTTGACATGTTGGTGGAAAAGAAGGCAAAACATTCTTCG
rJMSF028A02+          ACTTTTGCTAATCGCAACATGCTTGACATGTTGGTGGAAAAGAAGGCAAAACATTCTTCG
rJMSF003J20+          ACTTTTGCTAATCGCAACATGCTTGACATGTTGGTGGAAAAGAAGGCAAAACATTCTTCG
JMFN043E07-           ACTTTTGCTAATCGCAACATGCTTGACATGTTGGTGGAAAAGAAGGCAAAACATTCTTCG
                      ____________________________________________________________
consensus             ACTTTTGCTAATCGCAACATGCTTGACATGTTGGTGGAAAAGAAGGCAAAACATTCTTCG
 
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rJMSF048E14+          GGCTCAAAGAATTGCAGCACGAGAAGCTCCTTACGCAAAGGCAAGAACCCATTTCTCTCG
rJMSF028A02+          GGCTCAAAGAATTGCAGCACGAGAAGCTCCTTACGCAAAGGCAAGAACCCATTTCTCTCG
rJMSF003J20+          GGCTCAAAGAATTGCAGCACGAGAAGCTCCTTNCGCAAAGGCAAGAACCCATTTCTCTCG
JMFN043E07-           GGCTCAAAGAATTGCAGCACGAGAAGCTCCTTACGCAAAGGCAAGAACCCATTTCTCTCG
                      ____________________________________________________________
consensus             GGCTCAAAGAATTGCAGCACGAGAAGCTCCTTACGCAAAGGCAAGAACCCATTTCTCTCG
 
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rJMSF048E14+          CGATGTGCAAATGGCAAGACATCATGGTCAAGAAAACAGTAAAAACACTCGAACAGCTGC
rJMSF028A02+          CGATGTGCAAATGGCAAGACATCATGGTCAAGAAAACAGTAAAAACACTCGAACAGCTGC
rJMSF003J20+          CGATGTGCAAATGGCAAGACATCATGGTCAAGAAAACAGTAAAAACACTCGAACAGCTGC
JMFN043E07-           CGATGTGCAAATGGCAAGACATCATGGTCAAGAAAACAGTAAAAACACTCGAACAGCTGC
                      ____________________________________________________________
consensus             CGATGTGCAAATGGCAAGACATCATGGTCAAGAAAACAGTAAAAACACTCGAACAGCTGC
 
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rJMSF048E14+          AGAAAATGGACCTCCTCTGCTAACCTGATCAAATTAGTTGTGAAATCCCAGATGCAGTGC
rJMSF028A02+          AGAAAATGGACCTCCTCTGCTAACCTGATCAAATTAGTTGTGAAATCCCAGATGCAGTGC
rJMSF003J20+          AGAAAATGGACCTCCTCTGCTAACCTGATCAAATTAGTTGTGAAATCCCAGATGCAGTGC
JMFN043E07-           AGAAAATGGACCTCCTCTGCTAACCTGATCAAATTAGTTGTGAAATCCCAGATGCAGTGC
                      ____________________________________________________________
consensus             AGAAAATGGACCTCCTCTGCTAACCTGATCAAATTAGTTGTGAAATCCCAGATGCAGTGC
 
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rJMSF048E14+          ACAGAAGATGCCCATTTTTGTCAACGGACGATTTGTATATTTGGAAAATATGCAATTAAT
rJMSF028A02+          ACAGAAGATGCCCATTTTTGTCAACGGACGATTTGTATATTTGGAAAATATGCAATTAAT
rJMSF003J20+          ACAGAAGATGCCCATTTTTGTCAACGGACGATTTGTATATTTGGAAAATATGCAATTAAT
JMFN043E07-           ACAGAAGATGCCCATTTTTGTCAACGGACGATTTGTATATTTGGAAAATATGCAATTAAT
                      ____________________________________________________________
consensus             ACAGAAGATGCCCATTTTTGTCAACGGACGATTTGTATATTTGGAAAATATGCAATTAAT
 
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rJMSF048E14+          TAAATTCAGTGATATGAAGAACACTGCACACTTCCACAGGTTAAAATATTTAATACGATG
rJMSF028A02+          TAAATTCAGTGATATGAAGAACACTGCACACTTCCACAGGTTAAAATATTTAATACGATG
rJMSF003J20+          TAAATTCAGTGATATGAAGAACACTGCACACTTCCACAGGTTAAAATATTTAATACGATG
JMFN043E07-           TAAATTCAGTGATATGAAGAACACTGCACACTTCCACAGGTTAAAATATTTAATACGATG
                      ____________________________________________________________
consensus             TAAATTCAGTGATATGAAGAACACTGCACACTTCCACAGGTTAAAATATTTAATACGATG
 
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rJMSF048E14+          CGACCTCCTGCCTCGTTGCATTTGACACTGCAAGAAATGTTGTATATTACCACTGTTGCA
rJMSF028A02+          CGACCTCCTGCCTCGTTGCATTTGACACTGCAAGAAATGTTGTATATTACCACTGTTGCA
rJMSF003J20+          CGACCTCCTGCCTCGTTGCATTTGACACTGCAAGAAATGTTGTATATTACCACTGTTGCA
JMFN043E07-           CGACCTCCTGCCTCGTTGCATTTGACACTGCAAGAAATGTTGTATATTACCACTGTTGCA
                      ____________________________________________________________
consensus             CGACCTCCTGCCTCGTTGCATTTGACACTGCAAGAAATGTTGTATATTACCACTGTTGCA
 
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rJMSF048E14+          T                                                           
rJMSF028A02+          TTGGAAGAATGTAACCAACCAA                                      
rJMSF003J20+          -TGGAAGAATGTAACCAACCAA                                      
JMFN043E07-           TTGGAAGAATGTAACCAACCAAGCTTTAATTTATTTTATTTATGATAGAAAATTAAACCC
                      ____________________________________________________________
consensus             TTGGAAGAATGTAACCAACCAAGCTTTAATTTATTTTATTTATGATAGAAAATTAAACCC