| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF043P24 | Sequence | 640 | 001858 (11) | emb|CDP06904.1| | 6e-50 | unnamed protein product [Coffea canephora] | 556 | 001858 (11) | emb|CDP06904.1| | 4e-50 | unnamed protein product [Coffea canephora] |
| JMFN005F24 | Sequence | 627 | 001858 (11) | emb|CDP06904.1| | 5e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFN006J13 | Sequence | 623 | 001858 (11) | emb|CDP06904.1| | 5e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFN014M10 | Sequence | 617 | 001858 (11) | emb|CDP06904.1| | 2e-49 | unnamed protein product [Coffea canephora] | |||||
| JMFN014P22 | Sequence | 628 | 001858 (11) | emb|CDP06904.1| | 6e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFN017G11 | Sequence | 613 | 001858 (11) | emb|CDP06904.1| | 5e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFN031G05 | Sequence | 607 | 001858 (11) | emb|CDP06904.1| | 2e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFN037A10 | Sequence | 643 | 001858 (11) | emb|CDP06904.1| | 8e-50 | unnamed protein product [Coffea canephora] | |||||
| JMFN037D13 | Sequence | 629 | 001858 (11) | emb|CDP06904.1| | 1e-47 | unnamed protein product [Coffea canephora] | |||||
| JMFN038O23 | Sequence | 630 | 001858 (11) | emb|CDP06904.1| | 2e-49 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF043P24- GCCTCTGCCAGAGTG
JMFN031G05+ ATCAGCATGCCTCTGCCAGAGTG
JMFN037A10+ G
____________________________________________________________
consensus ATCAGCATGCCTCTGCCAGAGTG
. : . : . : . : . : . :
rJMFF043P24- CAAAATATCATTGAATTATGGAAGAGAAATTCTACATCCATGAGGAAAACGATACGGGAC
JMFN031G05+ CAAAATATCATTGAATTATGGAAGAGAAATTCTACATCCATGAGGAAAACGATACGGGAC
JMFN037A10+ CAAAATATCATTGAATTATGGAAGAGAAATTCTACATCCATGAGGAAAACGATACGGGAC
JMFN014P22+ CATCCATGAGGAAAACGATACGGGAC
____________________________________________________________
consensus CAAAATATCATTGAATTATGGAAGAGAAATTCTACATCCATGAGGAAAACGATACGGGAC
. : . : . : . : . : . :
rJMFF043P24- CATTGTTTTCATGATTCAAGGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN031G05+ CATTGTTTTCATGATTCAAGGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN037A10+ CATTGTTTTCATGATTCAAGGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN014P22+ CATTGTNTTCATGATTCAAGGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN017G11+ TTTCATGATTCAAGGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN014M10+ CATGATTCAAGGTTTANTTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN005F24+ GGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN037D13+ TTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFF043P24+ TTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN006J13+ TTCAAAGTCCATGCTCCTATCAACAAAACACT
JMFN038O23+ CAAAGTCCATGCTCCTATCAACAAAACACT
____________________________________________________________
consensus CATTGTTTTCATGATTCAAGGTTTTATTTTCAAAGTCCATGCTCCTATCAACAAAACACT
. : . : . : . : . : . :
rJMFF043P24- ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN031G05+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN037A10+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN014P22+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN017G11+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN014M10+ ATACTTCAGTCCTGTACTTCTTTCTTCTGGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN005F24+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN037D13+ ATACTTCAGTCCTGTACTTCTTTCTTCTGTCCCTTGNACATCAGATACCAGCCCAGAGCA
JMFF043P24+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN006J13+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
JMFN038O23+ ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTGNACATCAGATACCAGCCCAGAGCA
____________________________________________________________
consensus ATACTTCAGTCCTGTACTTCTTTCTTCTTGTCCTTTGACATCAGATACCAGCCCAGAGCA
. : . : . : . : . : . :
rJMFF043P24- CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN031G05+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN037A10+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN014P22+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN017G11+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN014M10+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN005F24+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN037D13+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFF043P24+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN006J13+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
JMFN038O23+ CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
____________________________________________________________
consensus CCAACACCAGTTACAATTCCAGCCAAAACACCATAGTTGCGGTAATTGTCATTCGACACC
. : . : . : . : . : . :
rJMFF043P24- CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN031G05+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN037A10+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN014P22+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN017G11+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN014M10+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN005F24+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN037D13+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFF043P24+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN006J13+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
JMFN038O23+ CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
____________________________________________________________
consensus CCGGGTGTTGAGGAGGAGGCTTGAGCACCTGCTTTAGCATCCGCTACAGACCCTGAATCC
. : . : . : . : . : . :
rJMFF043P24- CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN031G05+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN037A10+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN014P22+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN017G11+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN014M10+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN005F24+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN037D13+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFF043P24+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN006J13+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
JMFN038O23+ CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
____________________________________________________________
consensus CCAGAGTTGGCAGCAGCTGGTTTTTCTGGATTGGGACCCTTTCGGGCAAGCTTCTCCAAT
. : . : . : . : . : . :
rJMFF043P24- TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN031G05+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN037A10+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN014P22+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN017G11+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN014M10+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN005F24+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN037D13+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFF043P24+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN006J13+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
JMFN038O23+ TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
____________________________________________________________
consensus TTCTCCTGCTCAGTTTTCTTGATATAGACATTTTCTGCAGCTTTTTCCTCCTCACTGAGC
. : . : . : . : . : . :
rJMFF043P24- ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCANAGCATTTCTTGCTGCCATG
JMFN031G05+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN037A10+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN014P22+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN017G11+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN014M10+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN005F24+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN037D13+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFF043P24+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN006J13+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
JMFN038O23+ ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
____________________________________________________________
consensus ACCTTGCCACTACTTGAGAACCTACGAGATACATACCTCAAAGCATTTCTTGCTGCCATG
. : . : . : . : . : . :
rJMFF043P24- AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN031G05+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN037A10+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN014P22+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN017G11+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN014M10+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN005F24+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN037D13+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFF043P24+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN006J13+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
JMFN038O23+ AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
____________________________________________________________
consensus AAGAAGTTTCTTCAAACAAATTCCCGGAGAGGCGGATAGCCGGAGACTGGCTTATGAACC
. : . : . : . : . : . :
rJMFF043P24- C
JMFN031G05+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGA
JMFN037A10+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN014P22+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN017G11+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN014M10+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN005F24+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN037D13+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFF043P24+ CACGAGGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN006J13+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
JMFN038O23+ CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
____________________________________________________________
consensus CACGAAGAGTCGGAGAGGCGAAGCTGGAGACGGAGTGGCTAAGAGGGTCAGAGGGTAAGA
. : . : . : . : . : . :
JMFN037A10+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCG
JMFN014P22+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFN017G11+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFN014M10+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFN005F24+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFN037D13+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFF043P24+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFN006J13+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
JMFN038O23+ AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
____________________________________________________________
consensus AGCGGAGAGGCGGAGACGGAGAAAGACTCTGGCGATGGGCCGATGGTGTCTGGGCGTCTG
. : . : . : . : . : . :
JMFN014P22+ GC
JMFN017G11+ GCAATCTAGGTGAGAGACA
JMFN014M10+ GCAATCTAGGTGAGAGACAGAGAGGC
JMFN005F24+ GCAATCTAGGTGAGAGACAGAGAGGCGAGAGCGTTTGAGGTGAGGA
JMFN037D13+ GCAATCTAGGTGAGAGACAGAGAGGCGAGAGCGTTTGAGGTGAGGA
JMFF043P24+ GCAATCTAGGTGAGAGACAGAGAGGCGAGAGCGTNTGAGGTGAGGA
JMFN006J13+ GCAATCTAGGTGAGAGACAGAGAGGCGAGAGCGTTTGAGGTGAGGA
JMFN038O23+ GCAATCTAGGTGAGAGACAGAGAGGCGAGAGCGTTTGAGGTGAGGAGTGAGAGGTGTCAG
____________________________________________________________
consensus GCAATCTAGGTGAGAGACAGAGAGGCGAGAGCGTTTGAGGTGAGGAGTGAGAGGTGTCAG