Contig 001852:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C10Sequence550020583emb|CAN68972.1|1e-32hypothetical protein VITISV_043156 [Vitis vinifera]731001852 (2)ref|XP_009620263.1|1e-57PREDICTED: uncharacterized protein slp1-like [Nicotiana tomentosiformis] ref|XP_
JMFN037G20Sequence615001852 (2)ref|XP_009620263.1|1e-49PREDICTED: uncharacterized protein slp1-like [Nicotiana tomentosiformis] ref|XP_

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF015C10- GTGTCAAGTTGATGTATGAGATGTATAAATTAC
                      ____________________________________________________________
consensus GTGTCAAGTTGATGTATGAGATGTATAAATTAC
 
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rJMFF015C10- AAGGAAAGGATGATAATGGTTATGCTACAATTGAGTAGCAGGAAAAACCAGGAAAAGGAA
                      ____________________________________________________________
consensus AAGGAAAGGATGATAATGGTTATGCTACAATTGAGTAGCAGGAAAAACCAGGAAAAGGAA
 
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rJMFF015C10- AAGCGGCCCTTGGCAGAAAAATTCCCAGAACTATAAATACTCAGGAAAACCAACAGCCTT
                      ____________________________________________________________
consensus AAGCGGCCCTTGGCAGAAAAATTCCCAGAACTATAAATACTCAGGAAAACCAACAGCCTT
 
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rJMFF015C10- AGAAATGCTAAGATCCCAAATATTAAACATGCCACAAATATAACTATTGATCCTTTATTC
                      ____________________________________________________________
consensus AGAAATGCTAAGATCCCAAATATTAAACATGCCACAAATATAACTATTGATCCTTTATTC
 
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rJMFF015C10- TCCATGAATACCTGGTTCTGCCAAACTTCTTCCATCTTCATTCTGAGATTAGCATTGTCC
JMFN037G20+ GAGATTAGCATTGTCC
                      ____________________________________________________________
consensus TCCATGAATACCTGGTTCTGCCAAACTTCTTCCATCTTCATTCTGAGATTAGCATTGTCC
 
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rJMFF015C10- CTGATTAAATGCTCAAGCTCCATGGAAACAAGGGATTTCCAAGAGACAAGATTATTGACT
JMFN037G20+ GTGATTAAATGCTCAAGCTCCATGGAAACAAGGGATTTCCAAGAGACAAGATTATTGACT
                      ____________________________________________________________
consensus GTGATTAAATGCTCAAGCTCCATGGAAACAAGGGATTTCCAAGAGACAAGATTATTGACT
 
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rJMFF015C10- TCCTTATTTATTGTCTCCTTGCTCTCAAGTAAACCCCTCATCTCTAACAAGAACTTGTCC
JMFN037G20+ TCCTTATTTATTGTCTCCTTGCTCTCAAGTAAACCCCTCATCTCTAACAAGAACTTGTCC
                      ____________________________________________________________
consensus TCCTTATTTATTGTCTCCTTGCTCTCAAGTAAACCCCTCATCTCTAACAAGAACTTGTCC
 
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rJMFF015C10- ATAAGGAAATTTCCCTCTTCCAAGTCTTTGTCAATTTCTTTGAAAGCCTTCCCATACCTA
JMFN037G20+ ATAAGGAAATTTCCCTCTT-CAAGTCTTTGTCAATTTCTTTGAAAGCCTTCCCATACCTA
                      ____________________________________________________________
consensus ATAAGGAAATTTCCCTCTTCCAAGTCTTTGTCAATTTCTTTGAAAGCCTTCCCATACCTA
 
. : . : . : . : . : . :
rJMFF015C10- GAATTCAACTCCTCTAGATACCTCTCCAGAAATGACAGATTTATATCTAGGGACTTAATC
JMFN037G20+ GAATTCAACTCCTCTAGATACCTCTCCAGAAATGACAGATTTATATCTAGGGACTTAATC
                      ____________________________________________________________
consensus GAATTCAACTCCTCTAGATACCTCTCCAGAAATGACAGATTTATATCTAGGGACTTAATC
 
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rJMFF015C10- TTTTTCATCAGAATCTTGTAAACACTGTCACCAGGCATCCTGTTCACATGTAAACTGCGA
JMFN037G20+ TTTTTCATCAGAATCTTGTAAACACTGTCACCAGGCATCCTGTTCACATGTAAACTGCGA
                      ____________________________________________________________
consensus TTTTTCATCAGAATCTTGTAAACACTGTCACCAGGCATCCTGTTCACATGTAAACTGCGA
 
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rJMFF015C10- ATTTCCCCGGGTGGGTCAGACACTGCAACTGTTGTCACTGGTTTAGCAACTGCATCAGAA
JMFN037G20+ ATTTCCCCGGGTGGGTCAGACACTGCAACTGTTGTCACTGGTTTAGCAACTGCATCAGAA
                      ____________________________________________________________
consensus ATTTCCCCGGGTGGGTCAGACACTGCAACTGTTGTCACTGGTTTAGCAACTGCATCAGAA
 
. : . : . : . : . : . :
rJMFF015C10- GTTTCAACTGCAAGCCCTGTCTGCAAATCATCACCATCTGCATTTTGACAAGGTTCTCCT
JMFN037G20+ GTTTCAACTGCAAGCCCTGTCTGCAAATCATCACCATCTGCATTTTGACAAGGTTCTCCT
                      ____________________________________________________________
consensus GTTTCAACTGCAAGCCCTGTCTGCAAATCATCACCATCTGCATTTTGACAAGGTTCTCCT
 
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rJMFF015C10- TCAGAAGATTTGTGGGTACTGCTTTTCTGATCAGAAGT
JMFN037G20+ TCAGAAGATTTGTGGGTACTGCTTTTCTGATCAGAAGTACACAGCTTAGCTGGAACAGAC
                      ____________________________________________________________
consensus TCAGAAGATTTGTGGGTACTGCTTTTCTGATCAGAAGTACACAGCTTAGCTGGAACAGAC
 
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JMFN037G20+ ACAAGCTCCTCAAGCATCTTTTCCACAGCATCCACTCCATACACTTCCAGCAAGCTTAAG
                      ____________________________________________________________
consensus ACAAGCTCCTCAAGCATCTTTTCCACAGCATCCACTCCATACACTTCCAGCAAGCTTAAG
 
. : . : . : . : . : . :
JMFN037G20+ GTACAATAGAATTCTGAACCATAATGACTCAGTATCTTCAGCTTCAGATACCTAGCCCAT
                      ____________________________________________________________
consensus GTACAATAGAATTCTGAACCATAATGACTCAGTATCTTCAGCTTCAGATACCTAGCCCAT