Contig 001846:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF047I20+                                                          CCGCAGAGGAATC
                      ____________________________________________________________
consensus                                                            CCGCAGAGGAATC
 
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JMSF047I20+           CCTGAGGTTGCGAGTTGAGATCCAATGTTGCGGGGAGATGTGCTAATGGTGCTGTCGCTA
                      ____________________________________________________________
consensus             CCTGAGGTTGCGAGTTGAGATCCAATGTTGCGGGGAGATGTGCTAATGGTGCTGTCGCTA
 
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JMSF047I20+           TTCTTCTACTCCCGCCTTCTGCTTCAACGCGGAAATGAAGTTGTCCCTTTCTTCTGGTGT
JMFN034B03+                                         GGAAATGAAGTTGTCCCTTTCTTCTGGTGT
                      ____________________________________________________________
consensus             TTCTTCTACTCCCGCCTTCTGCTTCAACGCGGAAATGAAGTTGTCCCTTTCTTCTGGTGT
 
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JMSF047I20+           CATTCCTTCGGTAGAGCAGTCCCCGACGCCCCACTCAGCTCCTCGGATGCAATACTTGTC
JMFN034B03+           CATTCCTTCGGTAGAGCAGTCCCCGACGCCCCACTCAGCTCCTCGGATGCAATACTTGTC
                      ____________________________________________________________
consensus             CATTCCTTCGGTAGAGCAGTCCCCGACGCCCCACTCAGCTCCTCGGATGCAATACTTGTC
 
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JMSF047I20+           TTGAATGGACTGTCGGTTTTTCTCTTTATTTAGCTTGGACTTCTCGAGCAACTGTTTAAG
JMFN034B03+           TTGAATGGACTGTCGGTTTTTCTCTTTATTTAGCTTGGACTTCTCGAGCAACTGTTTAAG
                      ____________________________________________________________
consensus             TTGAATGGACTGTCGGTTTTTCTCTTTATTTAGCTTGGACTTCTCGAGCAACTGTTTAAG
 
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JMSF047I20+           CAGGGGAGACTCTTTGAATCTGGCATCCGCCTCCGCATACTTCTTCTGATTTGCTTCATT
JMFN034B03+           CAGGGGAGACTCTTTGAATCTGGCATCCGCCTCCGCATACTTCTTCTGATTTGCTTCATT
                      ____________________________________________________________
consensus             CAGGGGAGACTCTTTGAATCTGGCATCCGCCTCCGCATACTTCTTCTGATTTGCTTCATT
 
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JMSF047I20+           CCAGCGATTCAGGAAGTCGATCTGAGGTAACTCTGGACCAGGAACTGATTCTATCCCACT
JMFN034B03+           CCAGCGATTCAGGAAGTCGATCTGAGGTAACTCTGGACCAGGAACTGATTCTATCCCACT
                      ____________________________________________________________
consensus             CCAGCGATTCAGGAAGTCGATCTGAGGTAACTCTGGACCAGGAACTGATTCTATCCCACT
 
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JMSF047I20+           ATAGCCCGACAGAAATCCAGCATTAGCGGGAGAGGAGGACATTAAAGCAGCGAGCGCCAT
JMFN034B03+           ATAGCCCGACAGAAATCCAGCATTAGCGGGAGAGGAGGACATTAAAGCAGCGAGCGCCAT
                      ____________________________________________________________
consensus             ATAGCCCGACAGAAATCCAGCATTAGCGGGAGAGGAGGACATTAAAGCAGCGAGCGCCAT
 
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JMSF047I20+           AGCTACGGGAACAAGAGACTTCTGAGAGATTATCTTTTTCTGGGCGAGTGGTTGAGAGCA
JMFN034B03+           AGCTACGGGAACAAGAGACTTCTGAGAGATTATCTTTTTCTGGGCGAGTGGTTGAGAGCA
                      ____________________________________________________________
consensus             AGCTACGGGAACAAGAGACTTCTGAGAGATTATCTTTTTCTGGGCGAGTGGTTGAGAGCA
 
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JMSF047I20+           GGACGTGGAATCGTTGCTAGAGGCGGACGGCTCCGGTTTCCGACAACTGACGGCGGTAGA
JMFN034B03+           GGACGTGGAATCGTTGCTAGAGGCGGACGGCTCCGGTTTCCGACAACTGACGGCGGTAGA
                      ____________________________________________________________
consensus             GGACGTGGAATCGTTGCTAGAGGCGGACGGCTCCGGTTTCCGACAACTGACGGCGGTAGA
 
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JMSF047I20+           AACGCGTCGGAGGTTGTTTTGCGGCCGGAGAGGGTTGTGGGTAGACGGCGGCGACGGGCG
JMFN034B03+           AACGCGTCGGAGGTTGTTTTGCGGCCGGAGAGGGTTGTGGGTAGACGGCGGCGACGGGCG
                      ____________________________________________________________
consensus             AACGCGTCGGAGGTTGTTTTGCGGCCGGAGAGGGTTGTGGGTAGACGGCGGCGACGGGCG
 
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JMSF047I20+           AAAGTGTGGGTTCGGGAAGACCCACGTTAGAGAGCCCATTCTTGGTTGTGTTTTGTGTCA
JMFN034B03+           AAAGTGTGGGTTCGGGAAGACCCACGTTAGAGAGCCCATTCTTGGTTGTGTTTTGTGTCA
                      ____________________________________________________________
consensus             AAAGTGTGGGTTCGGGAAGACCCACGTTAGAGAGCCCATTCTTGGTTGTGTTTTGTGTCA
 
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JMSF047I20+           AAAATGGTGGAGAGGTTTAAGGCTTTTTAGAGCCAACGGCCAC                 
JMFN034B03+           AAAATGGTGGAGAGGTTTAAGGCTTTTTAGAGCCAACGGCCACGGTCGGCTCGCAGAGAC
                      ____________________________________________________________
consensus             AAAATGGTGGAGAGGTTTAAGGCTTTTTAGAGCCAACGGCCACGGTCGGCTCGCAGAGAC