Contig 001837:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035I15+                                               AGGTTGTTGATTGCCGTGTTTGT
                      ____________________________________________________________
consensus                                                  AGGTTGTTGATTGCCGTGTTTGT
 
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rJMFF035I15+          GGTGACCCAAACTCTGTGCTCCGTTTTGCATTCGTTGAGTTTACTGATGAAGAAGGAGCG
                      ____________________________________________________________
consensus             GGTGACCCAAACTCTGTGCTCCGTTTTGCATTCGTTGAGTTTACTGATGAAGAAGGAGCG
 
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rJMFF035I15+          AGGAATGCTTTGAGTCTGGCGGGAACTATGCTCGGCTACTATCCCGTGAGGGTGCTTCCC
rJMSF031J23+                                                       GTGAGGGTGCTTCCC
                      ____________________________________________________________
consensus             AGGAATGCTTTGAGTCTGGCGGGAACTATGCTCGGCTACTATCCCGTGAGGGTGCTTCCC
 
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rJMFF035I15+          TCGAAAACCGCTATTGCACCGGTCAACCCAACGTTTCTGCCACAGTCTGAAGATGAAAGA
rJMSF031J23+          TCGAAAACCGCTATTGCACCGGTCAACCCAACGTTTCTGCCACAGTCTGAAGATGAAAGA
                      ____________________________________________________________
consensus             TCGAAAACCGCTATTGCACCGGTCAACCCAACGTTTCTGCCACAGTCTGAAGATGAAAGA
 
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rJMFF035I15+          GAGATGTGTGCGAGAACTATATACTGCACGAACATTGATAAGAAGGTTACTCATTTGGAT
rJMSF031J23+          GAGATGTGTGCGAGAACTATATACTGCACGAACATTGATAAGAAGGTTACTCATTTGGAT
                      ____________________________________________________________
consensus             GAGATGTGTGCGAGAACTATATACTGCACGAACATTGATAAGAAGGTTACTCATTTGGAT
 
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rJMFF035I15+          GTCAAACTCTTCTTCGAAACCATTTGTGGAGAGGTTCTTCGCTTGAGGCTGCTAGGTGAC
rJMSF031J23+          GTCAAACTCTTCTTCGAAACCATTTGTGGAGAGGTTCTTCGCTTGAGGCTGCTAGGTGAC
                      ____________________________________________________________
consensus             GTCAAACTCTTCTTCGAAACCATTTGTGGAGAGGTTCTTCGCTTGAGGCTGCTAGGTGAC
 
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rJMFF035I15+          CATAATCATTCTACTCGCATAGCCTTTGTTGAGTTTGTAATGGCTGAGAGTGCTATTGCT
rJMSF031J23+          CATAATCATTCTACTCGCATAGCCTTTGTTGAGTTTGTAATGGCTGAGAGTGCTATTGCT
JMFN029A22-                          CGCATAGCCTTTGTTGAGTTTGTAATGGCTGAGAGTGCTATTGCT
                      ____________________________________________________________
consensus             CATAATCATTCTACTCGCATAGCCTTTGTTGAGTTTGTAATGGCTGAGAGTGCTATTGCT
 
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rJMFF035I15+          GCTTTGAACTGCAGCGGTGCGGTCTTGGGAACACTTCCTATAAGGGTAAGTCCATCAAAG
rJMSF031J23+          GCTTTGAACTGCAGCGGTGCGGTCTTGGGAACACTTCCTATAAGGGTAAGTCCATCAAAG
JMFN029A22-           GCTTTGAACTGCAGCGGTGCGGTCTTGGGAACACTTCCTATAAGGGTAAGTCCATCAAAG
                      ____________________________________________________________
consensus             GCTTTGAACTGCAGCGGTGCGGTCTTGGGAACACTTCCTATAAGGGTAAGTCCATCAAAG
 
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rJMFF035I15+          ACTCCTGTTCGACCTCGTGC                                        
rJMSF031J23+          ACTCCTGTTCGACCTCGTGCCCCTCGCCCAGCCATGCACTGATCCTATATCGTCTACCAT
JMFN029A22-           ACTCCTGTTCGACCTCGTGCCCCTCGCCCAGCCATGCACTGATCCTATATCGTCTACCAT
                      ____________________________________________________________
consensus             ACTCCTGTTCGACCTCGTGCCCCTCGCCCAGCCATGCACTGATCCTATATCGTCTACCAT
 
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rJMSF031J23+          CGTTGTTGTCGCTGCTATGTATGGAGCTGTGTCGATCTTCTTGTGTTTATGAATCTATAT
JMFN029A22-           CGTTGTTGTCGCTGCTATGTATGGAGCTGTGTCGATCTTCTTGTGTTTATGAATCTATAT
                      ____________________________________________________________
consensus             CGTTGTTGTCGCTGCTATGTATGGAGCTGTGTCGATCTTCTTGTGTTTATGAATCTATAT
 
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rJMSF031J23+          GCACATAGTTACTTGAAACCTTGTATTGTACTTTGTTTCCAACTATGTTGTTAGTGTCTG
JMFN029A22-           GCACATAGTTACTTGAAACCTTGTATTGTACTTTGTTTCCAACTATGTTGTTAGTGTCTG
                      ____________________________________________________________
consensus             GCACATAGTTACTTGAAACCTTGTATTGTACTTTGTTTCCAACTATGTTGTTAGTGTCTG
 
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rJMSF031J23+          TCTGTCTGTCTGTAAGGCCCAAACTGAGAAGAATTTTTATCCTCTCCTCCATTAGAGCTT
JMFN029A22-           TCTGTCTGTCTGTAAGGCCCAAACTGAGAAGAATTTTTATCCTCTCCTCCATTAGAGCTT
                      ____________________________________________________________
consensus             TCTGTCTGTCTGTAAGGCCCAAACTGAGAAGAATTTTTATCCTCTCCTCCATTAGAGCTT
 
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rJMSF031J23+          TGTAGAGTTGTTGGATCGGATGGTATGGTCTTATGAGGCTTACTTCTCGTAATTTATGTT
JMFN029A22-           TGTAGAGTTGTTGGATCGGATGGTATGGTCTTATGAGGCTTACTTCTCGTAATTTATGTT
                      ____________________________________________________________
consensus             TGTAGAGTTGTTGGATCGGATGGTATGGTCTTATGAGGCTTACTTCTCGTAATTTATGTT
 
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rJMSF031J23+          GGCCGCCATTATGCTAAACTCTCTCATAGCCACTGCACTGCATCCAAGTGCTGATGCCAG
JMFN029A22-           GGCCGCCATTATGCTATACTCTCTCATAGCCACTGCACTGCATCCAAGTGCTGATGCCAG
                      ____________________________________________________________
consensus             GGCCGCCATTATGCTATACTCTCTCATAGCCACTGCACTGCATCCAAGTGCTGATGCCAG
 
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rJMSF031J23+          TTCATGT                                                     
JMFN029A22-           TTCATGTTTCTAACACTTTTTAAGACTGCTTTTAACTGCTTATATATACTTGTCTTATAC
                      ____________________________________________________________
consensus             TTCATGTTTCTAACACTTTTTAAGACTGCTTTTAACTGCTTATATATACTTGTCTTATAC