| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN010N01 | Sequence | 616 | 001831 (6) | ref|XP_009611002.1| | 9e-96 | PREDICTED: uncharacterized N-acetyltransferase ycf52 [Nicotiana tomentosiformis | |||||
| JMFN017C18 | Sequence | 525 | 001831 (6) | ref|XP_009611002.1| | 1e-89 | PREDICTED: uncharacterized N-acetyltransferase ycf52 [Nicotiana tomentosiformis | |||||
| JMFN018J17 | Sequence | 616 | 001831 (6) | ref|XP_009611002.1| | 1e-79 | PREDICTED: uncharacterized N-acetyltransferase ycf52 [Nicotiana tomentosiformis | |||||
| JMFN034J22 | Sequence | 567 | 001831 (6) | ref|XP_009611002.1| | 2e-93 | PREDICTED: uncharacterized N-acetyltransferase ycf52 [Nicotiana tomentosiformis | |||||
| JMSF004M11 | Sequence | 312 | 001831 (6) | ref|XP_009611002.1| | 2e-25 | PREDICTED: uncharacterized N-acetyltransferase ycf52 [Nicotiana tomentosiformis | 347 | 001831 (6) | ref|XP_004238988.1| | 7e-65 | PREDICTED: uncharacterized N-acetyltransferase ycf52 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFN034J22+ TTTTTTGTTTTCTTG
JMFN017C18+ CTTG
JMFN010N01+ TTTCTTTTTNTGTTTTCTTG
____________________________________________________________
consensus TTTCTTTTTTTGTTTTCTTG
. : . : . : . : . : . :
JMFN034J22+ AATACACCATTCCCCTAATGCCATCCGGGTCGGCTACAAAACCCAGGGAGCGATAGAAGC
JMFN017C18+ AATACACCATTCCCCTAATGCCATCCGGGTCGGCTACAAAACCCAGGGAGCGATAGAAGC
rJMSF004M11- AAACCCAGGGAGCGATAGAAGC
JMFN010N01+ AATACACCATTCCCCTAATGCCATCCGGGTCGGCTACAAAACCCAGGGAGCGATAGAAGC
JMFN018J17+ AGGGAGCGATAGAAGC
____________________________________________________________
consensus AATACACCATTCCCCTAATGCCATCCGGGTCGGCTACAAAACCCAGGGAGCGATAGAAGC
. : . : . : . : . : . :
JMFN034J22+ CGAGAACCCGGGGCTCCGAATAGAGGGCAATGTTAGTAATACCCTTGTCTAACAGCTTGG
JMFN017C18+ CGAGAACCCGGGGCTCCGAATAGAGGGCAATGTTAGTAATACCCTTGTCTAACAGCTTGG
rJMSF004M11- CGAGAACCCGGGGCTCCGAATAGAGGGCAATGTTAGTAATACCCTTGTCTAACAGCTTGG
JMFN010N01+ CGAGAACCCGGGGCTCCGAATAGAGGGCAATGTTAGTAATACCCTTGTCTAACAGCTTGG
JMFN018J17+ CGAGAACCCGGGGCTCCGAATAGAGGGCAATGTTAGTAATACCCTTGTCTAACAGCTTGG
____________________________________________________________
consensus CGAGAACCCGGGGCTCCGAATAGAGGGCAATGTTAGTAATACCCTTGTCTAACAGCTTGG
. : . : . : . : . : . :
JMFN034J22+ TGACGATCCTCTCCATGACAGCCTTCCCCAGGCCAATCCCTTGGAAGCTGGGGTCCACCA
JMFN017C18+ TGACGATCCTCTCCATGACAGCCTTCCCCAGGCCAATCCCTTGGAAGCTGGGGTCCACCA
rJMSF004M11- TGACGATCCTCTCCATGACAGCCTTCCCCAGGCCAATCCCTTGGAAGCTGGGGTCCACCA
JMFN010N01+ TGACGATCCTCTCCATGACAGCCTTCCCCAGGCCAATCCCTTGGAAGCTGGGGTCCACCA
JMFN018J17+ TGACTATCCTCTCCATGACAGCCTTCCCCAGGCCAATCCCTTGGAAGCTGGGGTCCACCA
____________________________________________________________
consensus TGACGATCCTCTCCATGACAGCCTTCCCCAGGCCAATCCCTTGGAAGCTGGGGTCCACCA
. : . : . : . : . : . :
JMFN034J22+ CGACGTCCCAGATGATTGCATTGAAGACGCCGTCGCCGGTGGCTCTGGCGAACGCCACCG
JMFN017C18+ CGACGTCCCAGATGATTGCATTGAAGACGCCGTCGCCGGTGGCTCTGGCGAACGCCACCG
rJMSF004M11- CGACGTCCCAGATGATTGCATTGAAGACGCCGTCGCCGGTGGCTCTGGCGAACGCCACCG
JMFN010N01+ CGACGTCCCAGATGATTGCATTGAAGACGCCGTCGCCGGTGGCTCTGGCGAACGCCACCG
JMFN018J17+ CGACGTCCCAGATGATTGCATTGAAGACGCCGTCGCCGGTGGCTCTGGCGAACGCCACCG
____________________________________________________________
consensus CGACGTCCCAGATGATTGCATTGAAGACGCCGTCGCCGGTGGCTCTGGCGAACGCCACCG
. : . : . : . : . : . :
JMFN034J22+ GCCGCTTAGCCTTCTGGTGCTCCACCCACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
JMFN017C18+ GCCGCTTAGCCTTCTGGTGCTCCACCCACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
rJMSF004M11- GCCGCTTAGTCTTCTGGTGCTCCACCCACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
JMFN010N01+ GCCGCTTAGCCTTCTGGTGCTCCACCCACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
JMSF004M11+ ACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
JMFN018J17+ GCCGCTTAGCCTTCTGGTGCTCCACCCACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
____________________________________________________________
consensus GCCGCTTAGCCTTCTGGTGCTCCACCCACAGCAGCGCGTCGGTGTGCTCCAACGCCAGCT
. : . : . : . : . : . :
JMFN034J22+ GTATCTTGGCGGTGTCGCGGCGGGGGAACCCCACGGCGGCGAACACGGAGTTGAGGTGGT
JMFN017C18+ GTATCTTGGCGGTGTCGCGGCGGGGGAACCCCGCGGCGGCGAACACGGAGTTGAGGTGGT
rJMSF004M11- GTATCTTGGCGGTGTCGCGGCGGGGGAACCCCACGGCGGCGAACACGGAGTTGAGGTGGT
JMFN010N01+ GTATCTTGGCGGTGTCGCGGCGGGGGAACCCCACGGCGGCGAACACGGAGTTGAGGTGGT
JMSF004M11+ GTATCTNGGCGGTGTCGCGGCGGGGGAACCCCACGGCGGCGAACACGGAGTTGAGGTGGT
JMFN018J17+ GTATCTTGGCGGTGTCGCGGCGGGGGAACCCCACGGCGGCGAACACGGAGTTGAGGTGGT
____________________________________________________________
consensus GTATCTTGGCGGTGTCGCGGCGGGGGAACCCCACGGCGGCGAACACGGAGTTGAGGTGGT
. : . : . : . : . : . :
JMFN034J22+ CTAGGTTGAGGTTGGTGAAGGTGGTGTGGAGGTTGAAGCCTCGGGACTGGAGCTCCTCAT
JMFN017C18+ CTAGGTTGAGGTTGGTGAAGGTGGTGTGGAGGTTGAAGCCTCGGGACTGGAGCTCCTCAT
rJMSF004M11- CTANGTTGANGTTGGTGAANGTGGT
JMFN010N01+ CTAGGTTGAGGTTGGTGAAGGTGGTGTGGAGGTTGAAGCCTCGGGACTGGAGCTCCTCAT
JMSF004M11+ CTAGGTTGAGGTTGGTGAAGGTGGTGTGGAGGTTGAAGCCTCGGGACTGGAGCTCCTCAT
JMFN018J17+ CTAGGTTGAGGTTGGTGAAGGTGGTGTGGAGGTTGAAGCCTCGGGACTGGAGCTCCTCAT
____________________________________________________________
consensus CTAGGTTGAGGTTGGTGAAGGTGGTGTGGAGGTTGAAGCCTCGGGACTGGAGCTCCTCAT
. : . : . : . : . : . :
JMFN034J22+ CGGAGATGGAGAACTTCGCGGCGGCGGCTATGGGGGGTTGTTGTTCCTGGGCTACGACGG
JMFN017C18+ CGGAGATGGAGAACTTCGCGGCGGCGGCTATGGGGGGTTGTTGTTCCTGGGCTACGACGG
JMFN010N01+ CGGAGATGGAGAACTTCGCGGCGGCGGCTATGGGGGGTTGTTGTTCCTGGGCTACGACGG
JMSF004M11+ CGGAGATGGAGAACTTCGCGGCGGCGGCTATGGGGGGTTGTTGTTCCTGGGCTACGACGG
JMFN018J17+ CGGAGATGGAGAACTTCGCGGCGGCGGCTATGGGGGGTTGTTGTTCCTGGGCTACGACGG
____________________________________________________________
consensus CGGAGATGGAGAACTTCGCGGCGGCGGCTATGGGGGGTTGTTGTTCCTGGGCTACGACGG
. : . : . : . : . : . :
JMFN034J22+ CGAGGCTTTTGTAGTGGCGGTGGGTGGTGGGTTTGAGAGTGAAGTGGGTGTGAACATGGC
JMFN017C18+ CGAGGCTTTTGTAGTGGCGGTGGGTGGTGGGTTTGAGAGTG
JMFN010N01+ CGAGGCTTTTGTAGTGGCGGTGGGTGGTGGGTTTGAGAGTGAAGTGGGTGTGAACATGGC
JMSF004M11+ CGAGGCTTTTGTAGTGGCGGTGGGTGGTGGGTTTGAGAGTGAAGTGGGTGTGAACATGGC
JMFN018J17+ CGAGGCTTTTGTAGTGGCGGTGGGTGGTGGGTTTGAGAGTGAAGTGGGTGTGAACATGGC
____________________________________________________________
consensus CGAGGCTTTTGTAGTGGCGGTGGGTGGTGGGTTTGAGAGTGAAGTGGGTGTGAACATGGC
. : . : . : . : . : . :
JMFN034J22+ GAGCTGAAATAA
JMFN010N01+ GAGCTGAAATAATGGTGTTATAGAGAAGCATTTTTCATGGCTGATATGATCGATCG
JMSF004M11+ GAGCTGAAATAATGGTGTTATAGAGAAGCATTTTTCAT
JMFN018J17+ GAGCTGAAATAATGGTGTTATAGAGAAGCATTTTTCATGGCTGATATGATCGATCGATCT
____________________________________________________________
consensus GAGCTGAAATAATGGTGTTATAGAGAAGCATTTTTCATGGCTGATATGATCGATCGATCT
. : . : . : . : . : . :
JMFN018J17+ TTTTAATTTGCAGAACAGTAAATGGGTTTGTCACTCTATCTATGGTTAGCAAATGAAAAC
____________________________________________________________
consensus TTTTAATTTGCAGAACAGTAAATGGGTTTGTCACTCTATCTATGGTTAGCAAATGAAAAC