Contig 001827:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN016N23-                                             AGTAACTTTCCGGGCATGATCATGCC
                      ____________________________________________________________
consensus                                               AGTAACTTTCCGGGCATGATCATGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN016N23-           ATCGATGTGGCCTGAGGGACAAGCCAACGGAAACAGGCAACCTTATCAACAGCTATGGCA
                      ____________________________________________________________
consensus             ATCGATGTGGCCTGAGGGACAAGCCAACGGAAACAGGCAACCTTATCAACAGCTATGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN016N23-           TTTCAATGGACTTCATCGACCTGTGTGGAGTAGGGAAGACGAGAACTCACTATTAACTTA
                      ____________________________________________________________
consensus             TTTCAATGGACTTCATCGACCTGTGTGGAGTAGGGAAGACGAGAACTCACTATTAACTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN016N23-           CGACTCAACAAATCCAGGTGCATACCAATCTAGTACCACCATATCTTAGATAGCAAATTA
                      ____________________________________________________________
consensus             CGACTCAACAAATCCAGGTGCATACCAATCTAGTACCACCATATCTTAGATAGCAAATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+                                                             TTTGCANGC
JMFN016N23-           AAGTATTCCAGACAACACTAGTAATTCTGTATTCTTTATTGGCACAGCTTCTTTGCATGC
                      ____________________________________________________________
consensus             AAGTATTCCAGACAACACTAGTAATTCTGTATTCTTTATTGGCACAGCTTCTTTGCATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+          AAATCAGNTAAAGANGGAGCTATGAAGGTANAACGCGAAGCTTTTGGCTGTAGNTAGGCA
JMFN016N23-           AAATCAGCTAAAGATGGAGCTATGAAGGTAAAACGCGAAGCTTTTGGCTGTAGTTAGGCA
                      ____________________________________________________________
consensus             AAATCAGCTAAAGATGGAGCTATGAAGGTAAAACGCGAAGCTTTTGGCTGTAGTTAGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+          NGTATATATGNCGACGCANTAGTAGATTGCAGGGAATNTGAGAAAGGTGGTCACANCTCN
JMFN016N23-           TGTATATATGACGACGCAGTAGTAGATTGCAGGGAATTTGAGAAAGGTGGTCACAACTCA
                      ____________________________________________________________
consensus             TGTATATATGACGACGCAGTAGTAGATTGCAGGGAATTTGAGAAAGGTGGTCACAACTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+          CANCANCTGGAAATNGGGTTTCCANGATCTCTAAATNGCAGNGACCNGGAAATCTTAGTA
JMFN016N23-           CAACAACTGGAAATCGGGTTTCCATGATCTCTAAATTGCAGCGACCTGGAAATCCTAGTA
                      ____________________________________________________________
consensus             CAACAACTGGAAATCGGGTTTCCATGATCTCTAAATTGCAGCGACCTGGAAATCTTAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+          TTATCTCGCCNGAAGGGANGACTGCTTGCTAGTCTTGATTACATATATACCCANATATAT
JMFN016N23-           TTATCTCGCCTGAAGGGATGACTGCTTGCTAGTCTTGATTACATATATACCCATATATAT
                      ____________________________________________________________
consensus             TTATCTCGCCTGAAGGGATGACTGCTTGCTAGTCTTGATTACATATATACCCATATATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+          ATAAATATATGTTTGATATATATATATATATGTATATATACACTGGTGTTTTGCATCTCT
JMFN016N23-           ATAAATATATGTTTGATATATATATATATATGTATATATACACTGGTGTTTTGCATCTCT
                      ____________________________________________________________
consensus             ATAAATATATGTTTGATATATATATATATATGTATATATACACTGGTGTTTTGCATCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023A12+          GTGAATACTAACAACTTGAGAGACTCGTTCAATCTGATA                     
JMFN016N23-           GTGAATACTAACAACTTGAGAGACTCGTTCAATCTGATATTGGGTGCATGAAATGATTGA
                      ____________________________________________________________
consensus             GTGAATACTAACAACTTGAGAGACTCGTTCAATCTGATATTGGGTGCATGAAATGATTGA