Contig 001827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023A12Sequence439020600437001827 (2)
JMFN016N23Sequence626001827 (2)emb|CDP10090.1|9e-19unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN016N23- AGTAACTTTCCGGGCATGATCATGCC
                      ____________________________________________________________
consensus AGTAACTTTCCGGGCATGATCATGCC
 
. : . : . : . : . : . :
JMFN016N23- ATCGATGTGGCCTGAGGGACAAGCCAACGGAAACAGGCAACCTTATCAACAGCTATGGCA
                      ____________________________________________________________
consensus ATCGATGTGGCCTGAGGGACAAGCCAACGGAAACAGGCAACCTTATCAACAGCTATGGCA
 
. : . : . : . : . : . :
JMFN016N23- TTTCAATGGACTTCATCGACCTGTGTGGAGTAGGGAAGACGAGAACTCACTATTAACTTA
                      ____________________________________________________________
consensus TTTCAATGGACTTCATCGACCTGTGTGGAGTAGGGAAGACGAGAACTCACTATTAACTTA
 
. : . : . : . : . : . :
JMFN016N23- CGACTCAACAAATCCAGGTGCATACCAATCTAGTACCACCATATCTTAGATAGCAAATTA
                      ____________________________________________________________
consensus CGACTCAACAAATCCAGGTGCATACCAATCTAGTACCACCATATCTTAGATAGCAAATTA
 
. : . : . : . : . : . :
rJMFF023A12+ TTTGCANGC
JMFN016N23- AAGTATTCCAGACAACACTAGTAATTCTGTATTCTTTATTGGCACAGCTTCTTTGCATGC
                      ____________________________________________________________
consensus AAGTATTCCAGACAACACTAGTAATTCTGTATTCTTTATTGGCACAGCTTCTTTGCATGC
 
. : . : . : . : . : . :
rJMFF023A12+ AAATCAGNTAAAGANGGAGCTATGAAGGTANAACGCGAAGCTTTTGGCTGTAGNTAGGCA
JMFN016N23- AAATCAGCTAAAGATGGAGCTATGAAGGTAAAACGCGAAGCTTTTGGCTGTAGTTAGGCA
                      ____________________________________________________________
consensus AAATCAGCTAAAGATGGAGCTATGAAGGTAAAACGCGAAGCTTTTGGCTGTAGTTAGGCA
 
. : . : . : . : . : . :
rJMFF023A12+ NGTATATATGNCGACGCANTAGTAGATTGCAGGGAATNTGAGAAAGGTGGTCACANCTCN
JMFN016N23- TGTATATATGACGACGCAGTAGTAGATTGCAGGGAATTTGAGAAAGGTGGTCACAACTCA
                      ____________________________________________________________
consensus TGTATATATGACGACGCAGTAGTAGATTGCAGGGAATTTGAGAAAGGTGGTCACAACTCA
 
. : . : . : . : . : . :
rJMFF023A12+ CANCANCTGGAAATNGGGTTTCCANGATCTCTAAATNGCAGNGACCNGGAAATCTTAGTA
JMFN016N23- CAACAACTGGAAATCGGGTTTCCATGATCTCTAAATTGCAGCGACCTGGAAATCCTAGTA
                      ____________________________________________________________
consensus CAACAACTGGAAATCGGGTTTCCATGATCTCTAAATTGCAGCGACCTGGAAATCTTAGTA
 
. : . : . : . : . : . :
rJMFF023A12+ TTATCTCGCCNGAAGGGANGACTGCTTGCTAGTCTTGATTACATATATACCCANATATAT
JMFN016N23- TTATCTCGCCTGAAGGGATGACTGCTTGCTAGTCTTGATTACATATATACCCATATATAT
                      ____________________________________________________________
consensus TTATCTCGCCTGAAGGGATGACTGCTTGCTAGTCTTGATTACATATATACCCATATATAT
 
. : . : . : . : . : . :
rJMFF023A12+ ATAAATATATGTTTGATATATATATATATATGTATATATACACTGGTGTTTTGCATCTCT
JMFN016N23- ATAAATATATGTTTGATATATATATATATATGTATATATACACTGGTGTTTTGCATCTCT
                      ____________________________________________________________
consensus ATAAATATATGTTTGATATATATATATATATGTATATATACACTGGTGTTTTGCATCTCT
 
. : . : . : . : . : . :
rJMFF023A12+ GTGAATACTAACAACTTGAGAGACTCGTTCAATCTGATA
JMFN016N23- GTGAATACTAACAACTTGAGAGACTCGTTCAATCTGATATTGGGTGCATGAAATGATTGA
                      ____________________________________________________________
consensus GTGAATACTAACAACTTGAGAGACTCGTTCAATCTGATATTGGGTGCATGAAATGATTGA