Contig 001821:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031E19-                         GGTTGCTGAGTTTCAGTATCCCACAGATAAATACTCTTGAAATCA
                      ____________________________________________________________
consensus                            GGTTGCTGAGTTTCAGTATCCCACAGATAAATACTCTTGAAATCA
 
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rJMSF031E19-          TATGGAAATAGAGAGTGGCATATCTCACTCATTGTTTCTAAAGAATCGGATTCCTATTTA
                      ____________________________________________________________
consensus             TATGGAAATAGAGAGTGGCATATCTCACTCATTGTTTCTAAAGAATCGGATTCCTATTTA
 
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rJMSF031E19-          CGTCTTTATACAGCAAGTAGCGAGTGCGAGGTTTACCCAGAGCAGCATACCATTGGGGCA
                      ____________________________________________________________
consensus             CGTCTTTATACAGCAAGTAGCGAGTGCGAGGTTTACCCAGAGCAGCATACCATTGGGGCA
 
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rJMSF031E19-          CGAACGGTGCCATCCAAATAGCATCGCCAGCCTCAACAGGATACCAGCTATCACCTAATC
                      ____________________________________________________________
consensus             CGAACGGTGCCATCCAAATAGCATCGCCAGCCTCAACAGGATACCAGCTATCACCTAATC
 
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rJMSF031E19-          GATATATACCCTGCCCCTCCAAAAGCAACAAACCGTGCTGGTTGTAATGGACCTCCTTTA
                      ____________________________________________________________
consensus             GATATATACCCTGCCCCTCCAAAAGCAACAAACCGTGCTGGTTGTAATGGACCTCCTTTA
 
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rJMSF031E19-          CATTCAGGAATTCTCCCGGTTGAAAATCCATGATATGAATATTGAAATCATAATCTAAAG
                      ____________________________________________________________
consensus             CATTCAGGAATTCTCCCGGTTGAAAATCCATGATATGAATATTGAAATCATAATCTAAAG
 
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rJMSF031E19-          ATGTCGGAAGAAGCTTCCTCAGTTCAAAGACCTCGCCCGGGGTTTCAAGGAGGGGTTGCC
JMSF031E19+                                                            GAGGGGTTGCC
                      ____________________________________________________________
consensus             ATGTCGGAAGAAGCTTCCTCAGTTCAAAGACCTCGCCCGGGGTTTCAAGGAGGGGTTGCC
 
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rJMSF031E19-          TGTCTGTCGAACCAACAATCTGGTGGCTTGCGTAATTTTCGATTTTGGAATATCTTCTCT
JMSF031E19+           TGTCTGTCGAACCAACAATCTGGTGGCTTGCGTAATTTTCGATTTTGGAATATCTTCTCT
                      ____________________________________________________________
consensus             TGTCTGTCGAACCAACAATCTGGTGGCTTGCGTAATTTTCGATTTTGGAATATCTTCTCT
 
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rJMSF031E19-          CGAATACAACGAGGGTTGCAGATGCATCAGCTTTCACAGCGTGTTCCAGATTCGGAGGTA
JMSF031E19+           CGAATACAACGAGGGTTGCAGATGCATCAGCTTTCACAGCGTGTTCCAGATTCGGAGGTA
JMFN011O14+                                                                  AGGTA
                      ____________________________________________________________
consensus             CGAATACAACGAGGGTTGCAGATGCATCAGCTTTCACAGCGTGTTCCAGATTCGGAGGTA
 
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rJMSF031E19-          AATAGGCATAAGAGTCCACCTTCAGTTTGTGGCTATTCCCAGACACATTAGTCATAACTA
JMSF031E19+           AATAGGCATAAGAGTCCACCTTCAGTTTGTGGCTATTCCCAGACACATTAGTCATAACTA
JMFN011O14+           AATAGGCATAAGAGTCCACCTTCAGTTTGTGGCTATTCCCAGACACATTAGTCATAACTA
                      ____________________________________________________________
consensus             AATAGGCATAAGAGTCCACCTTCAGTTTGTGGCTATTCCCAGACACATTAGTCATAACTA
 
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rJMSF031E19-          CCTCGCCCTCAACCACAAATATGAACCTTTCGACACCGCTTGGAGGAAGCCCTGATATTG
JMSF031E19+           CCTCGCCCTCAACCACAAATATGAACCTTTCGACACCGCTTGGAGGAAGCCCTGATATTG
JMFN011O14+           CCTCGCCCTCAACCACAAATATGAACCTTTCGACACCGCTTGGAGGAAGCCCTGATATTG
                      ____________________________________________________________
consensus             CCTCGCCCTCAACCACAAATATGAACCTTTCGACACCGCTTGGAGGAAGCCCTGATATTG
 
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rJMSF031E19-          AATTTTCTTGCATCTTTGCCAAGTACATAACGAAATGCGATCCCATTTCGGGTGTGATTA
JMSF031E19+           AATTTTCTTGCATCTTTGCCAAGTACATAACGAAATGCGATCCCATTTCGGGTGTGATTA
JMFN011O14+           AATTTTCTTGCATCTTTGCCAAGTACATAACGAAATGCGATCCCATTTCGGGTGTGATTA
                      ____________________________________________________________
consensus             AATTTTCTTGCATCTTTGCCAAGTACATAACGAAATGCGATCCCATTTCGGGTGTGATTA
 
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JMSF031E19+           GAAACGCCCCGAGGGTGTTTTTCCAATCAGGTAAAGGGCTGAACACATGACTTTCGGGAG
JMFN011O14+           GAAACGCCCCGAGGGTGTTTTTCCAATCAGGTAAAGGGCTGAACACATGACTTTCGGGAG
                      ____________________________________________________________
consensus             GAAACGCCCCGAGGGTGTTTTTCCAATCAGGTAAAGGGCTGAACACATGACTTTCGGGAG
 
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JMSF031E19+           TAATTAAAGCATGGTCTCTCTTATAAACACTCCTAGTAAAACCTGGCAAGTCTTGGAGGT
JMFN011O14+           TAATTAAAGCATGGTCTCTCTTATAAACACTCCTAGTAAAACCTGGCAAGTCTTGGAGGT
                      ____________________________________________________________
consensus             TAATTAAAGCATGGTCTCTCTTATAAACACTCCTAGTAAAACCTGGCAAGTCTTGGAGGT
 
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JMSF031E19+           GAGGAGGAGAGAGTGTAGGGTTAGTGACTTTCCAATACAGTGGTCTAGAGTTGGAATCAG
JMFN011O14+           GAGGAGGAGAGAGTGTAGGGTTAGTGACTTTCCAATACAGTGGTCTAGAGTTGGAATCAG
                      ____________________________________________________________
consensus             GAGGAGGAGAGAGTGTAGGGTTAGTGACTTTCCAATACAGTGGTCTAGAGTTGGAATCAG
 
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JMSF031E19+           CATTCAAGATTGATGGTGCAGAGCAAAACCCTTCTTGGGCAACTCCAATCTTAACAGAAC
JMFN011O14+           CATTCAAGATTGATGGTGCAGAGCAAAACCCTTCTTGGGCAACTCCAATCTTAACAGAAC
                      ____________________________________________________________
consensus             CATTCAAGATTGATGGTGCAGAGCAAAACCCTTCTTGGGCAACTCCAATCTTAACAGAAC
 
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JMSF031E19+           CGAGGGTGATTGAGAGAAGAAGAAAGAGATGAAAAGATTGCATCTTTGAGAGGTTTGTTT
JMFN011O14+           CGAGGGTGATTGAGAGAAGAAGAAAGAGATGAAAAGATTGCATCTTTGAGAGGTTTGTTT
                      ____________________________________________________________
consensus             CGAGGGTGATTGAGAGAAGAAGAAAGAGATGAAAAGATTGCATCTTTGAGAGGTTTGTTT
 
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JMSF031E19+           GAGTTGGTGATACTGGTCGGGGATGTTTGCAAGTGTGTTTCC                  
JMFN011O14+           GAGTTGGTGATACTGGTCGGGGATGTTTGCAAGTGTGTTTCCCAGGGCTCATTTGAGGTT
                      ____________________________________________________________
consensus             GAGTTGGTGATACTGGTCGGGGATGTTTGCAAGTGTGTTTCCCAGGGCTCATTTGAGGTT
 
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JMFN011O14+           GTCCTGTTGTGTTGTGGTTTGCATTTCTGAGGTGGGAGATGAGTCAGCTGCCAGACTGAA
                      ____________________________________________________________
consensus             GTCCTGTTGTGTTGTGGTTTGCATTTCTGAGGTGGGAGATGAGTCAGCTGCCAGACTGAA