Contig 001820:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007P09Sequence566001820 (20)emb|CDX82799.1|4e-36BnaC01g12490D [Brassica napus]526001820 (20)emb|CDX82799.1|4e-36BnaC01g12490D [Brassica napus]
JMFN004M01Sequence469001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN011J22Sequence567001820 (20)emb|CDX82799.1|4e-36BnaC01g12490D [Brassica napus]
JMFN012H14Sequence500001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN012N20Sequence472001820 (20)emb|CDX82799.1|1e-36BnaC01g12490D [Brassica napus]
JMFN012N23Sequence474001820 (20)emb|CDX82799.1|1e-36BnaC01g12490D [Brassica napus]
JMFN014F06Sequence530001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN017D11Sequence484001820 (20)emb|CDX82799.1|1e-36BnaC01g12490D [Brassica napus]
JMFN018L15Sequence529001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN029N17Sequence528001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN034A12Sequence525001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN038G18Sequence480001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN039P13Sequence478001820 (20)emb|CDX82799.1|1e-36BnaC01g12490D [Brassica napus]
JMFN040H19Sequence499001820 (20)emb|CDX82799.1|1e-36BnaC01g12490D [Brassica napus]
JMFN041F02Sequence508001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMFN044F11Sequence529001820 (20)emb|CDX82799.1|2e-36BnaC01g12490D [Brassica napus]
JMSF043C24Sequence374001820 (20)emb|CDX82799.1|3e-32BnaC01g12490D [Brassica napus]
JMSF043D24Sequence473001820 (20)emb|CDX82799.1|1e-36BnaC01g12490D [Brassica napus]422001820 (20)emb|CDX82799.1|7e-37BnaC01g12490D [Brassica napus]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+                                       TTTTTTTTTTATAAGAAAAATTAAAGTTTATT
JMFN044F11+                                                   AAGAAAAATTAAAGTTTATT
JMFN029N17+                                                    AGAAAAATTAAAGTTTATT
JMFN041F02+                                                   AAGAAAAATTAAAGTTTATT
JMFN018L15+                                                   AAGAAAAATTAAAGTTTATT
JMFN014F06+                                                   AAGAAAAATTAAAGTTTATT
JMFN034A12+                                                   AAGAAAAATTAAAGTTTATT
JMFN012H14+                                                   AAGAAAAATTAAAGTTTATT
JMFN038G18+                                                   AAGAAAAATTAAAGTTTATT
JMFN011J22+                                          TTTTTTTTTAAGAAAAATTAAAGTTTATT
                      ____________________________________________________________
consensus                                         TTTTTTTTTTTTAAGAAAAATTAAAGTTTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN044F11+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN029N17+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN041F02+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN039P13+                                     CAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN012N23+                                           GAAACTAGAAAGAAGCAAATGCATCAAA
JMFN012N20+                                     CAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMSF043D24+                                          TGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN018L15+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN014F06+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN034A12+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
rJMFF007P09-                   TAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN012H14+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN017D11+                                             AACTAGAAAGAAGCAAATGCATCAAA
JMFN038G18+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
JMFN004M01+                                                               GCATCAAA
JMFN040H19-                                             AACTAGAAAGAAGCAAATGCATCAAA
JMFN011J22+           GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
                      ____________________________________________________________
consensus             GAAAATGAATAGAAAGCAAAAGTATACAGACTGAAACTAGAAAGAAGCAAATGCATCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN044F11+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN029N17+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN041F02+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN039P13+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN012N23+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN012N20+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMSF043D24+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
rJMSF043D24-                       CATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
rJMSF043C24-                                     CAATGTTATGTTTGTATGTCTGCAACCGGGACA
JMFN018L15+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN014F06+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN034A12+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
rJMFF007P09-          AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN012H14+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN017D11+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN038G18+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN004M01+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN040H19-           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
JMFN011J22+           AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
                      ____________________________________________________________
consensus             AGTGAGTTTGTCCCATACATTCGCATGCAATGTTATGTTTGTATGTCTGCAACCGGG-CA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN044F11+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN029N17+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN041F02+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN039P13+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN012N23+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN012N20+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMSF043D24+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
rJMSF043D24-          TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
rJMSF043C24-          TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN018L15+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN014F06+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN034A12+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
rJMFF007P09-          TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN012H14+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN017D11+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN038G18+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN004M01+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN040H19-           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
JMFN011J22+           TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
                      ____________________________________________________________
consensus             TTTATTTGCCAGAAAATGCTTCAATAATTCTAAAAGTAAACCAGATCAAGCATCTGTCTA
 
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JMFF007P09+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN044F11+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN029N17+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN041F02+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN039P13+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN012N23+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN012N20+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMSF043D24+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
rJMSF043D24-          TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
rJMSF043C24-          TTTGAAATATANCAGAAATTTTGGCCACTATTTGAGCGTTCATTCCTTCTTTCCNATACC
JMFN018L15+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN014F06+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN034A12+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
rJMFF007P09-          TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN012H14+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN017D11+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN038G18+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN004M01+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN040H19-           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
JMFN011J22+           TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
                      ____________________________________________________________
consensus             TTTGAAATATAGCAGAAATTTTGGCCA-TATTTGAGCGTTCATTCCTTCTTTCCAATACC
 
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JMFF007P09+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN044F11+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN029N17+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN041F02+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN039P13+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN012N23+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN012N20+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMSF043D24+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
rJMSF043D24-          ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
rJMSF043C24-          ATTTGACATATTGTAGANCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN018L15+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN014F06+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN034A12+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
rJMFF007P09-          ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN012H14+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN017D11+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN038G18+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN004M01+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN040H19-           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
JMFN011J22+           ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
                      ____________________________________________________________
consensus             ATTTGACATATTGTAGATCCCTCTGCCAATCATATACAACGATGAAGCAGCCAACGCAAG
 
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JMFF007P09+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN044F11+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN029N17+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN041F02+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN039P13+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN012N23+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN012N20+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMSF043D24+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
rJMSF043D24-          TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
rJMSF043C24-          TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCANATANGTGTGCCTGTGAAT
JMFN018L15+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN014F06+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN034A12+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
rJMFF007P09-          TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN012H14+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN017D11+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN038G18+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN004M01+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN040H19-           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
JMFN011J22+           TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
                      ____________________________________________________________
consensus             TGGGATGGCAACAGAGGTGACCTTATCAAGAGGACCCTTCAAATAGGTGTGCCTGTGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN044F11+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN029N17+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN041F02+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN039P13+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN012N23+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN012N20+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMSF043D24+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
rJMSF043D24-          GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
rJMSF043C24-          GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGNCTAGGCCTGANGGGTGTTTCAGT
JMFN018L15+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN014F06+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN034A12+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
rJMFF007P09-          GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN012H14+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN017D11+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN038G18+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN004M01+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN040H19-           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
JMFN011J22+           GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
                      ____________________________________________________________
consensus             GCTCTGGAAATACCTCTGCTTCTCGAGAAGCTTCTGTCTAGGCCTGAAGGGTGTTTCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN044F11+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN029N17+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN041F02+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN039P13+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN012N23+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN012N20+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMSF043D24+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
rJMSF043D24-          AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
rJMSF043C24-          AACCGACATGTTTTGAGATANAAAGACGA                               
JMFN018L15+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN014F06+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN034A12+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
rJMFF007P09-          AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN012H14+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN017D11+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN038G18+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACG                  
JMFN004M01+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN040H19-           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
JMFN011J22+           AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
                      ____________________________________________________________
consensus             AACCGACATGTTTTGAGATAGAAAGACGACGGCGACGCGACGGCTGCGGCTAGGGGTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P09+           GAGATGCAGAGTCAATAGGAGATTGAGATGTGTATACGCAGGCTTGATTG          
JMFN044F11+           GAGATGCAGAGTCAATAGGAGATTGAGATGT                             
JMFN029N17+           GAGATGCAGAGTCAATAGGAGATTGAGATGT                             
JMFN041F02+           GAGATGCAGA                                                  
JMFN039P13+           GAGATGCAGAGTCAATAGGAGATTGA                                  
JMFN012N23+           GAGATGCAGAGTCAATAGGAGATTGAGA                                
JMFN012N20+           GAGATGCAGAGTCAATAGGA                                        
JMSF043D24+           GAGATGCAGAGTCAAT                                            
rJMSF043D24-          GAGATGCAGAGTCAAT                                            
JMFN018L15+           GAGATGCAGAGTCAATAGGAGATTGAGATGT                             
JMFN014F06+           GAGATGCAGAGTCAATAGGAGATTGAGA                                
JMFN034A12+           GAGATGCAGAGTCAATAGGAGATTGAG                                 
rJMFF007P09-          GAGATGCAGAGTCAATAGGAGATTGAGATGTGTATACGCAGGCTTGATTG          
JMFN012H14+           GA                                                          
JMFN017D11+           GAGATGCAGAGTCAATAGGAGATTGAGATGTGTATACGCA                    
JMFN004M01+           GAGATGCAGAGTCAATAGGAGATTGAGATGTGTATACGCAGGC                 
JMFN040H19-           GAGATGCAGAGTCAATAGGA                                        
JMFN011J22+           GAGATGCAGAGTCAATAGGAGATTGAGATGTGTATACGCAGGCTTGATTGATAGAGAAAA
                      ____________________________________________________________
consensus             GAGATGCAGAGTCAATAGGAGATTGAGATGTGTATACGCAGGCTTGATTGATAGAGAAAA