Contig 001816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009H16Sequence594001816 (2)emb|CDP02094.1|3e-138unnamed protein product [Coffea canephora]
JMFN017K20Sequence562001816 (2)ref|XP_008443540.1|6e-76PREDICTED: shaggy-related protein kinase epsilon [Cucumis melo]

Alignment

This contig is upended


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JMFN017K20+                                   ACAACAATCAGGGGTAACAGTATTCTTAAGTCATAA
                      ____________________________________________________________
consensus                                     ACAACAATCAGGGGTAACAGTATTCTTAAGTCATAA
 
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JMFN017K20+           GTCAGTCGAGTATTTAATGAAGTATTGAAGAGCATCCTAAATCTTCAGCCACTGCAGATA
                      ____________________________________________________________
consensus             GTCAGTCGAGTATTTAATGAAGTATTGAAGAGCATCCTAAATCTTCAGCCACTGCAGATA
 
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JMFN017K20+           ATACAATTTGGTAGTTGCAAATCATTACAAGTATACACAAGATAAATACTCCATAAAAGT
                      ____________________________________________________________
consensus             ATACAATTTGGTAGTTGCAAATCATTACAAGTATACACAAGATAAATACTCCATAAAAGT
 
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JMFN017K20+           TACAACACAACCTAGACAAGGCAGGCACACTGCTTTTTTGCATGTTCTGGTATCAATTTG
                      ____________________________________________________________
consensus             TACAACACAACCTAGACAAGGCAGGCACACTGCTTTTTTGCATGTTCTGGTATCAATTTG
 
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JMFN017K20+           GATAGGAGTTCTGGACCTGCTCCTTTCAGCTCTTGGGGCCGGAAATTAAATAGAGGTGGC
                      ____________________________________________________________
consensus             GATAGGAGTTCTGGACCTGCTCCTTTCAGCTCTTGGGGCCGGAAATTAAATAGAGGTGGC
 
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JMFN017K20+           AATGGGCGGCCATTAGGAAGACGAGTATTGGGATCGCGGAGCTCATTAAAGAATGGATGG
                      ____________________________________________________________
consensus             AATGGGCGGCCATTAGGAAGACGAGTATTGGGATCGCGGAGCTCATTAAAGAATGGATGG
 
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JMFN017K20+           ATACAAGCTTCCAACGCAGTACACCTCAGGTATGGAGAGTACTGGAGAAGCCTTGAGACG
JMFN009H16+                 GCTTCCAACGCAGTACACTTCAGGTATGGAGAGTACTGGAGAAGCCTTGAGACG
                      ____________________________________________________________
consensus             ATACAAGCTTCCAACGCAGTACACTTCAGGTATGGAGAGTACTGGAGAAGCCTTGAGACG
 
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JMFN017K20+           AGATCTACAGCCTCAGGTGGCATGCGTTTATGGAAGATTTTGTGCCATGGGTGAGCCTTG
JMFN009H16+           AGATCTACAGCCTCAGGTGGCATGCGTTTATGGAAGATTTTGTGCCATGGGTGAGCCTTG
                      ____________________________________________________________
consensus             AGATCTACAGCCTCAGGTGGCATGCGTTTATGGAAGATTTTGTGCCATGGGTGAGCCTTG
 
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JMFN017K20+           ATTTGTGGGAACTTGAATTCTGTGTAATTTGGATTCATACATTTGATTTCCTCACGGGTT
JMFN009H16+           ATTTGTGGGAACTTGAATTCTGTGTAATTTGGATTCATACATTTGATTTCCTCACGGGTT
                      ____________________________________________________________
consensus             ATTTGTGGGAACTTGAATTCTGTGTAATTTGGATTCATACATTTGATTTCCTCACGGGTT
 
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JMFN017K20+           GGGGTCCCAAGAACCTTGATT                                       
JMFN009H16+           GGGGTCCCAAGAACCTTGATTATTTCGACAAGTTGATCAACACCACTATCACCAGGAAAG
                      ____________________________________________________________
consensus             GGGGTCCCAAGAACCTTGATTATTTCGACAAGTTGATCAACACCACTATCACCAGGAAAG
 
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JMFN009H16+           AGAGGCTGCCCAAGAAGTAGTTCTGCAAGAACACAGCCCACAGACCATATGTCAATCGCA
                      ____________________________________________________________
consensus             AGAGGCTGCCCAAGAAGTAGTTCTGCAAGAACACAGCCCACAGACCATATGTCAATCGCA
 
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JMFN009H16+           GTTGTGTATTCAGTAGCTCCAAAGATCAGCTCAGGTGCACGATAATAGCGAGAACAGATG
                      ____________________________________________________________
consensus             GTTGTGTATTCAGTAGCTCCAAAGATCAGCTCAGGTGCACGATAATAGCGAGAACAGATG
 
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JMFN009H16+           TATGAAATATTCGGTTCACCTTTCACCAGAACTTTGGCGCTTCCAAAATCACAGAGCTTC
                      ____________________________________________________________
consensus             TATGAAATATTCGGTTCACCTTTCACCAGAACTTTGGCGCTTCCAAAATCACAGAGCTTC
 
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JMFN009H16+           AGCTGATGGGTGTGAGGATTTACCAGCAGGTTCTGAGGCTTTATATCCCTGTGGCAAACT
                      ____________________________________________________________
consensus             AGCTGATGGGTGTGAGGATTTACCAGCAGGTTCTGAGGCTTTATATCCCTGTGGCAAACT
 
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JMFN009H16+           CCAATACCATGGATGTAAGCCAAAGATCTAAAGATCTGATATGTATAGAGCTTGACATAA
                      ____________________________________________________________
consensus             CCAATACCATGGATGTAAGCCAAAGATCTAAAGATCTGATATGTATAGAGCTTGACATAA
 
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JMFN009H16+           ATCATAGGCATCCTCTGGTTTGCTTTGCTGTAGTGTCTTGATACACGATACAATGTCTCC
                      ____________________________________________________________
consensus             ATCATAGGCATCCTCTGGTTTGCTTTGCTGTAGTGTCTTGATACACGATACAATGTCTCC