Contig 001812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007N18Sequence343001812 (2)emb|CDO99485.1|1e-13unnamed protein product [Coffea canephora]760019062emb|CDO96754.1|2e-29unnamed protein product [Coffea canephora]
JMFN004G03Sequence622001812 (2)ref|XP_010327054.1|1e-40PREDICTED: GDSL esterase/lipase At2g27360-like isoform X2 [Solanum lycopersicum

Alignment

This contig is upended


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JMFN004G03+                                                 GAGGGACATATGATTTTATCTC
                      ____________________________________________________________
consensus                                                   GAGGGACATATGATTTTATCTC
 
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JMFN004G03+           TTCTACGTCTTTTCCATAGCCCAATGCACGACGATAGTCGTTGCTCCCGAATGGTCCCAA
                      ____________________________________________________________
consensus             TTCTACGTCTTTTCCATAGCCCAATGCACGACGATAGTCGTTGCTCCCGAATGGTCCCAA
 
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JMFN004G03+           CACAAATAGTGAGGTTTTGAGCTTTTCCTTACATTCTGATGGTGTGGCACAGAAAATTGG
                      ____________________________________________________________
consensus             CACAAATAGTGAGGTTTTGAGCTTTTCCTTACATTCTGATGGTGTGGCACAGAAAATTGG
 
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JMFF007N18+                                          CTGAGGGAGCAATTTGTATCCACATTAAC
JMFN004G03+           CAACAATTGATTGAGCCATCTCATCTGAACTCTGAGGGAGCAATTTGTATCAACATTAAC
                      ____________________________________________________________
consensus             CAACAATTGATTGAGCCATCTCATCTGAACTCTGAGGGAGCAATTTGTATCCACATTAAC
 
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JMFF007N18+           TATTCCTCTTTNTTCATGGAACGCCGAGTCAACTGCCGCAGCTCCGGCGACAGCGAAATT
JMFN004G03+           TATTCCTCTTTCTTCATAGAACGCCGAGTCGACTGCCGCTGCTCCGGCAACCGCGAAATT
                      ____________________________________________________________
consensus             TATTCCTCTTTCTTCATGGAACGCCGAGTCGACTGCCGCTGCTCCGGCGACCGCGAAATT
 
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JMFF007N18+           CACACCTCCGTCAATATTTGACCCGCTTCTGCCGCCATTCATCATAACACTAGCTGATGG
JMFN004G03+           CACACCTCCGTCAATACTTGACCCGTTTCCGCCGCCATTCATCATAACACTAGCTGATGA
                      ____________________________________________________________
consensus             CACACCTCCGTCAATATTTGACCCGTTTCTGCCGCCATTCATCATAACACTAGCTGATGG
 
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JMFF007N18+           AGGCATAAATGGC-GTCCATAGTACTCCGCTATAAAATCTATGATGAGACGACCATCGGA
JMFN004G03+           AGGCATAAATGGCACTCCATAGTACTCCGCTATAAAATCTATGATTAGACGACCATCGGA
                      ____________________________________________________________
consensus             AGGCATAAATGGCAGTCCATAGTACTCCGCTATAAAATCTATGATTAGACGACCATCGGA
 
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JMFF007N18+           GCAGCGACCGGTGGGATGGTGAAAAAAAGTTTCTCCATAAGGTGGATTGCCCATGTGAGA
JMFN004G03+           GCAGCGGCCGGTGGGATGATGAAAGAATGTTTCTCCATAAGGTGGATCGCCCATGTGAGA
                      ____________________________________________________________
consensus             GCAGCGGCCGGTGGGATGGTGAAAGAATGTTTCTCCATAAGGTGGATTGCCCATGTGAGA
 
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JMFF007N18+           GTGGTTAGGGTAGAGAATAACCCTATTTCCAACATCTATA--AGAGTCCCCAAATGCAAA
JMFN004G03+           GTGGTTAGGGTAGAGAAGAACCCTATTTCCCACATCTGTAAGAGAGTTCCCAAATGCAAA
                      ____________________________________________________________
consensus             GTGGTTAGGGTAGAGAATAACCCTATTTCCCACATCTGTAAGAGAGTTCCCAAATGCAAA
 
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JMFF007N18+           GATGGATGTGTAGGGGC                                           
JMFN004G03+           GATGGATGTGTAGGGGCAAGCAGCTATGGCTATGGGTTTTGGAATTATGAATAGAAGGAA
                      ____________________________________________________________
consensus             GATGGATGTGTAGGGGCAAGCAGCTATGGCTATGGGTTTTGGAATTATGAATAGAAGGAA
 
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JMFN004G03+           AAAGGTGGAAATAATTGGTGTGAATTTGAAGGCTAGGGATGGGCAAGCCAATGCCATTGG
                      ____________________________________________________________
consensus             AAAGGTGGAAATAATTGGTGTGAATTTGAAGGCTAGGGATGGGCAAGCCAATGCCATTGG