Contig 001811:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004E23Sequence639001811 (2)emb|CDP12091.1|4e-44unnamed protein product [Coffea canephora]
JMFN010I18Sequence640001811 (2)emb|CDP12091.1|2e-39unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN010I18+                                                             ACTAAGGTTT
                      ____________________________________________________________
consensus                                                               ACTAAGGTTT
 
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JMFN010I18+           ACCTACTAAAGTAATTAGCTACAGTAAAATATTCTAAATCGATAATTTACCGCTTTGGGG
JMFN004E23+                                CAGTAAAATATTCTAAATCGATAATTTACCGCTTTGGGG
                      ____________________________________________________________
consensus             ACCTACTAAAGTAATTAGCTACAGTAAAATATTCTAAATCGATAATTTACCGCTTTGGGG
 
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JMFN010I18+           TTTCGCTCCCTTTGGTGAGGAAGAGTCATCGGCGACGGCGAGCAAGTTTATGGGTTTCTC
JMFN004E23+           TTTCGCTCCCTTTGGTGAGGAAGAGTCATCGGCGACGGCGAGCAAGTTTATGGGTTTCTC
                      ____________________________________________________________
consensus             TTTCGCTCCCTTTGGTGAGGAAGAGTCATCGGCGACGGCGAGCAAGTTTATGGGTTTCTC
 
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JMFN010I18+           GTGCGATGCATCGCTCGTTGTGCGTGATAAAATGGACAAATTTGAGTCTCTGGTGGAATT
JMFN004E23+           GTGCGATGCATCGCTCGTTGTGCGTGATAAAATGGACAAATTTGAGTCTCTGGTGGAATT
                      ____________________________________________________________
consensus             GTGCGATGCATCGCTCGTTGTGCGTGATAAAATGGACAAATTTGAGTCTCTGGTGGAATT
 
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JMFN010I18+           GAAAGATCTCTTGCAGTGTAAAATGGCGCTTTGAATTCCATCCTGTTGTTGTAACAGCGA
JMFN004E23+           GAAAGATCTCTTGCAGTGTAAAATGGCGCTTTGAATTCCATCCTGTTGTTGTAACAGCGA
                      ____________________________________________________________
consensus             GAAAGATCTCTTGCAGTGTAAAATGGCGCTTTGAATTCCATCCTGTTGTTGTAACAGCGA
 
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JMFN010I18+           GTCGTCGCGTCGTCGAGATGACAACTCACCGGACGGGACCACCGGTGACGGCGCAGATCG
JMFN004E23+           GTCGTCGCGTCGTCGAGATGACAACTCACCGGACGGGACCACCGGTGACGGCGCAGATCG
                      ____________________________________________________________
consensus             GTCGTCGCGTCGTCGAGATGACAACTCACCGGACGGGACCACCGGTGACGGCGCAGATCG
 
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JMFN010I18+           GCTTTTACTTAAATGTTTCCGGACAACTCGCAGTCCCGCCGGTAGGTTCCCCTGCTTCAG
JMFN004E23+           GCTTTTACTTAAATGTTTCCGGACAACTCGCAGTCCCGCCGGTAGGTTCCCCTGCTTCAG
                      ____________________________________________________________
consensus             GCTTTTACTTAAATGTTTCCGGACAACTCGCAGTCCCGCCGGTAGGTTCCCCTGCTTCAG
 
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JMFN010I18+           ACTCTTGACGTTGCTCAAAACCGCCGTTTTCTCAGCTACCTCTGCCGCTTCTGCTTCTCC
JMFN004E23+           ACTCTTGACGTTGCTCAAAACCGCCGTTTTCTCAGCTACCTCTGCCGCTTCTGCTTCTCC
                      ____________________________________________________________
consensus             ACTCTTGACGTTGCTCAAAACCGCCGTTTTCTCAGCTACCTCTGCCGCTTCTGCTTCTCC
 
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JMFN010I18+           TTTCTCCGCCGTCGGCTGCGGCGGAGGAGAGGCTACTAGAGCTGCCTTAGCTCCGGCTCC
JMFN004E23+           TTTCTCCGCCGTCGGCTGCGGCGGAGGAGAGGCTACTAGAGCTGCCTTAGCTCCGGCTCC
                      ____________________________________________________________
consensus             TTTCTCCGCCGTCGGCTGCGGCGGAGGAGAGGCTACTAGAGCTGCCTTAGCTCCGGCTCC
 
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JMFN010I18+           GGATAAGCTCAGCTGTCCCGAAAACCTCAATTTCTCGCCGTACCGCTTCGAGACACGGAT
JMFN004E23+           GGATAAGCTCAGCTGTCCCGAAAACCTCAATTTCTCGCCGTACCGCTTCGAGACACGGAT
                      ____________________________________________________________
consensus             GGATAAGCTCAGCTGTCCCGAAAACCTCAATTTCTCGCCGTACCGCTTCGAGACACGGAT
 
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JMFN010I18+           GTACAATGGCTTCACCATTTTCAAGTATTTCTGCATCATTTCTTTCGAAAATTTCTTCTC
JMFN004E23+           GTACAATGGCTTCACCATTTTCAAGTATTTCTGCATCATTTCTTTCGAAAATTTCTTCTC
                      ____________________________________________________________
consensus             GTACAATGGCTTCACCATTTTCAAGTATTTCTGCATCATTTCTTTCGAAAATTTCTTCTC
 
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JMFN010I18+           TTCCGCAAGTGAACTTGAGCTCGAATTCGA                              
JMFN004E23+           TTCCGCAAGTGAACTTGAGCTCGAATTCGAATTCGAATCAACATTTGAATGTGAATCCTC
                      ____________________________________________________________
consensus             TTCCGCAAGTGAACTTGAGCTCGAATTCGAATTCGAATCAACATTTGAATGTGAATCCTC