Contig 001808:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN043N08+                                                              AAGGGGGAT
JMFN003J07+                                                          AGTGAAGGGGGAT
                      ____________________________________________________________
consensus                                                            AGTGAAGGGGGAT
 
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JMFN043N08+           TTCATTGCATTTTGTAAGATCCATGAACAACAATACTAGTACATTCTTAAATTGCTTGTC
JMFN003J07+           TTCATTGCATTTTGTAAGATCCATGAACAACAATACTAGTACATTCTTAAATTGCTTGTC
                      ____________________________________________________________
consensus             TTCATTGCATTTTGTAAGATCCATGAACAACAATACTAGTACATTCTTAAATTGCTTGTC
 
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JMFN043N08+           CCCCCATCCTTAATTATTGCTTTTCCTCGTCCTTAAGTTGCTTGCCCCCGTCCTTACAGA
JMFN003J07+           CCCCCATCCTTAATTATTGCTTTTCCTCGTCCTTAAGTTGCTTGCCCCCGTCCTTACAGA
                      ____________________________________________________________
consensus             CCCCCATCCTTAATTATTGCTTTTCCTCGTCCTTAAGTTGCTTGCCCCCGTCCTTACAGA
 
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JMFN043N08+           TCTTCTGCTTTTCCTTACACAACTTGTCCTCGTCCTTACATTGCTTGTCCATAACGCCCT
JMFN003J07+           TCTTCTGCTTTTCCTTACACAACTTGTCCTCGTCCTTACATTGCTTGTCCATAACGCCCT
                      ____________________________________________________________
consensus             TCTTCTGCTTTTCCTTACACAACTTGTCCTCGTCCTTACATTGCTTGTCCATAACGCCCT
 
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JMFN043N08+           TACATTGCTTGTCCTTAAATTCCTTAACTTCTTTTCCCAAGGCCTTAAGTTCCTTCTTCT
JMFN003J07+           TACATTGCTTGTCCTTAAATTCCTTAACTTCTTTTCCCAAGGCCTTAAGTTCCTTCTTCT
                      ____________________________________________________________
consensus             TACATTGCTTGTCCTTAAATTCCTTAACTTCTTTTCCCAAGGCCTTAAGTTCCTTCTTCT
 
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JMFN043N08+           GCTGCTTCTTAAAGTCGTTAAGTTCCTTCTCCTCCTCCTTAAACTGCTTGTCCTCGCCGC
JMFN003J07+           GCTGCTTCTTAAAGTCCTTAAGTTCCTTCTCCTCCTCCTTAAACTGCTTGTCCTCGCCGC
                      ____________________________________________________________
consensus             GCTGCTTCTTAAAGTCGTTAAGTTCCTTCTCCTCCTCCTTAAACTGCTTGTCCTCGCCGC
 
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JMFN043N08+           CAATTTGAGACTTTG---CTTTATACGCCTTGGCGGTACATTCGGTTTCACATTTTTTAT
JMFN003J07+           CAATTTGAGACTTTGCTACTTTATACGCCTTGGCGGTACATTCGGTTTCACATTTTTTAT
                      ____________________________________________________________
consensus             CAATTTGAGACTTTGCTACTTTATACGCCTTGGCGGTACATTCGGTTTCACATTTTTTAT
 
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JMFN043N08+           TGCATACGATGAGGGTTTTTCCTGACTCTACGCAAGGGGCAAGGCATGGATCGAAGCAAA
JMFN003J07+           TGCATACGATGAGGGTTTTTCCTGACTCTACGCAAGGGGCAAGGCATGGATCGAAGCAAA
                      ____________________________________________________________
consensus             TGCATACGATGAGGGTTTTTCCTGACTCTACGCAAGGGGCAAGGCATGGATCGAAGCAAA
 
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JMFN043N08+           ACCTGTAAACCGAAGAAAGCGAAGCGTCGACTGTGAGGACAAACATGCACACCAGAAACA
JMFN003J07+           ACCTGTAAACCGAAGAAAGCGAAGCGTCGACTGTGAGGACAAACATGCACACCAGAAACA
                      ____________________________________________________________
consensus             ACCTGTAAACCGAAGAAAGCGAAGCGTCGACTGTGAGGACAAACATGCACACCAGAAACA
 
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JMFN043N08+           CGGGAACGTTAACCAACTTCTGGGCAGCCAACATTGTTTATTGTTTGTT           
JMFN003J07+           CGGGAACGTTAACCAACTTCTGGGCAGCCAACATTGTTTATTGTTTGTTGTTTTATTGTA
                      ____________________________________________________________
consensus             CGGGAACGTTAACCAACTTCTGGGCAGCCAACATTGTTTATTGTTTGTTGTTTTATTGTA