Contig 001807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N21Sequence548001807 (12)ref|XP_002519491.1|4e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com521001807 (12)ref|XP_002519491.1|3e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFF027B07Sequence538001807 (12)ref|XP_002519491.1|4e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com511001807 (12)ref|XP_002519491.1|3e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFF039B01Sequence496001807 (12)ref|XP_002519491.1|3e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com459001807 (12)ref|XP_002519491.1|2e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFN001D11Sequence492001807 (12)ref|XP_002519491.1|3e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFN005A19Sequence501001807 (12)ref|XP_002519491.1|3e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFN018P07Sequence507001807 (12)ref|XP_002519491.1|3e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFN036H10Sequence501001807 (12)ref|XP_002519491.1|8e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMFN037I17Sequence585001807 (12)ref|XP_002519491.1|5e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com
JMSF045P12Sequence496001807 (12)ref|XP_002519491.1|2e-36ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN018P07+ GAAGCAAAGGCACTCGATGCAAAACACATGTATACAAAATGTAATAGTAAGA
JMFF008N21+ ACAAAATGTAATAGTAAGA
rJMFF027B07- AAGA
JMFF027B07+ ACAAAATGTAATAGTAAGA
rJMFF008N21- AAGA
JMFN037I17- ACAAAATGTAATAGTAAGA
                      ____________________________________________________________
consensus GAAGCAAAGGCACTCGATGCAAAACACATGTATACAAAATGTAATAGTAAGA
 
. : . : . : . : . : . :
JMFN018P07+ TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMFF008N21+ CGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
rJMFF027B07- TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMFF027B07+ TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
rJMFF008N21- CGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMSF045P12+ TAAACACAAACCAACAAGCATTTATTATC
JMFN005A19+ GCATAAACACAAACCAACAAGCATTTATTATC
JMFF039B01+ AACACAAACCAACAAGCATTTATTATC
rJMFF039B01- TTATTATC
JMFN037I17- TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMFN036H10+ CACAAACCAACAAGCATTTATTATC
JMFN001D11+ GCATTTATTATC
                      ____________________________________________________________
consensus TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
 
. : . : . : . : . : . :
JMFN018P07+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFF008N21+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
rJMFF027B07- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFF027B07+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
rJMFF008N21- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMSF045P12+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN005A19+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFF039B01+ ATNTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
rJMFF039B01- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN037I17- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN036H10+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN001D11+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
                      ____________________________________________________________
consensus ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
 
. : . : . : . : . : . :
JMFN018P07+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFF008N21+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
rJMFF027B07- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFF027B07+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
rJMFF008N21- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMSF045P12+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN005A19+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFF039B01+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
rJMFF039B01- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN037I17- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN036H10+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN001D11+ ATCCGGATCGAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
                      ____________________________________________________________
consensus ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
 
. : . : . : . : . : . :
JMFN018P07+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFF008N21+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
rJMFF027B07- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFF027B07+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
rJMFF008N21- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMSF045P12+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN005A19+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFF039B01+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
rJMFF039B01- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN037I17- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN036H10+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN001D11+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACGATGAA
                      ____________________________________________________________
consensus TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
 
. : . : . : . : . : . :
JMFN018P07+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFF008N21+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
rJMFF027B07- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFF027B07+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
rJMFF008N21- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMSF045P12+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN005A19+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFF039B01+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
rJMFF039B01- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN037I17- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN036H10+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN001D11+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
                      ____________________________________________________________
consensus ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
 
. : . : . : . : . : . :
JMFN018P07+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFF008N21+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
rJMFF027B07- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFF027B07+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
rJMFF008N21- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMSF045P12+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN005A19+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFF039B01+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
rJMFF039B01- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN037I17- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN036H10+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN001D11+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTTTGAAACAGTGTGTGGAATTGTACC
                      ____________________________________________________________
consensus GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
 
. : . : . : . : . : . :
JMFN018P07+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFF008N21+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
rJMFF027B07- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFF027B07+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
rJMFF008N21- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMSF045P12+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN005A19+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFF039B01+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
rJMFF039B01- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN037I17- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN036H10+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN001D11+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
                      ____________________________________________________________
consensus TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
 
. : . : . : . : . : . :
JMFN018P07+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTG
JMFF008N21+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
rJMFF027B07- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFF027B07+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
rJMFF008N21- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMSF045P12+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN005A19+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFF039B01+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
rJMFF039B01- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN037I17- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN036H10+ CGCAAGAGCCGCAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN001D11+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGTTGAACTCCAATAACGAATGAAGTG
                      ____________________________________________________________
consensus CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
 
. : . : . : . : . : . :
JMFF008N21+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGCCTTT
rJMFF027B07- CAGAGATCTTTGGAGAAAATTCGGAAC
JMFF027B07+ CAGAGATCTTTGGAGAAAATTCGGAAC
rJMFF008N21- CAGAGATCTTTGGAGAAAATTCGGAACGACTGCCTTT
JMSF045P12+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTT
JMFN005A19+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCG
JMFF039B01+ CAGAGATCTTTGGAGAAAATTCGGAAC
rJMFF039B01- CAGAGATCTTTGGAGAAAATTCGGAAC
JMFN037I17- CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCG
JMFN036H10+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCG
JMFN001D11+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCGATTGCGGCTAT
                      ____________________________________________________________
consensus CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCGATTGCGGCTAT