| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008N21 | Sequence | 548 | 001807 (12) | ref|XP_002519491.1| | 4e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | 521 | 001807 (12) | ref|XP_002519491.1| | 3e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com |
| JMFF027B07 | Sequence | 538 | 001807 (12) | ref|XP_002519491.1| | 4e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | 511 | 001807 (12) | ref|XP_002519491.1| | 3e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com |
| JMFF039B01 | Sequence | 496 | 001807 (12) | ref|XP_002519491.1| | 3e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | 459 | 001807 (12) | ref|XP_002519491.1| | 2e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com |
| JMFN001D11 | Sequence | 492 | 001807 (12) | ref|XP_002519491.1| | 3e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | |||||
| JMFN005A19 | Sequence | 501 | 001807 (12) | ref|XP_002519491.1| | 3e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | |||||
| JMFN018P07 | Sequence | 507 | 001807 (12) | ref|XP_002519491.1| | 3e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | |||||
| JMFN036H10 | Sequence | 501 | 001807 (12) | ref|XP_002519491.1| | 8e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | |||||
| JMFN037I17 | Sequence | 585 | 001807 (12) | ref|XP_002519491.1| | 5e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | |||||
| JMSF045P12 | Sequence | 496 | 001807 (12) | ref|XP_002519491.1| | 2e-36 | ATOZI1, putative [Ricinus communis] gb|EEF42905.1| ATOZI1, putative [Ricinus com | |||||
This contig is upended
. : . : . : . : . : . :
JMFN018P07+ GAAGCAAAGGCACTCGATGCAAAACACATGTATACAAAATGTAATAGTAAGA
JMFF008N21+ ACAAAATGTAATAGTAAGA
rJMFF027B07- AAGA
JMFF027B07+ ACAAAATGTAATAGTAAGA
rJMFF008N21- AAGA
JMFN037I17- ACAAAATGTAATAGTAAGA
____________________________________________________________
consensus GAAGCAAAGGCACTCGATGCAAAACACATGTATACAAAATGTAATAGTAAGA
. : . : . : . : . : . :
JMFN018P07+ TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMFF008N21+ CGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
rJMFF027B07- TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMFF027B07+ TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
rJMFF008N21- CGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMSF045P12+ TAAACACAAACCAACAAGCATTTATTATC
JMFN005A19+ GCATAAACACAAACCAACAAGCATTTATTATC
JMFF039B01+ AACACAAACCAACAAGCATTTATTATC
rJMFF039B01- TTATTATC
JMFN037I17- TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
JMFN036H10+ CACAAACCAACAAGCATTTATTATC
JMFN001D11+ GCATTTATTATC
____________________________________________________________
consensus TGCATTGTCTGAATGTTTAAAGCTCATTGCATAAACACAAACCAACAAGCATTTATTATC
. : . : . : . : . : . :
JMFN018P07+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFF008N21+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
rJMFF027B07- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFF027B07+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
rJMFF008N21- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMSF045P12+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN005A19+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFF039B01+ ATNTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
rJMFF039B01- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN037I17- ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN036H10+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
JMFN001D11+ ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
____________________________________________________________
consensus ATCTACCCCAAAACTGTCTTCTTCATCATCATACAAGATAAAAGCGAAACAAAGGATACC
. : . : . : . : . : . :
JMFN018P07+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFF008N21+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
rJMFF027B07- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFF027B07+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
rJMFF008N21- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMSF045P12+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN005A19+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFF039B01+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
rJMFF039B01- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN037I17- ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN036H10+ ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
JMFN001D11+ ATCCGGATCGAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
____________________________________________________________
consensus ATCCGGATCCAAAACATTTCATGGTTTGAAGCTTAAAAAGAATTGTTTGTTCTTATGAAG
. : . : . : . : . : . :
JMFN018P07+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFF008N21+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
rJMFF027B07- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFF027B07+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
rJMFF008N21- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMSF045P12+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN005A19+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFF039B01+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
rJMFF039B01- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN037I17- TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN036H10+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
JMFN001D11+ TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACGATGAA
____________________________________________________________
consensus TGACAATGGTAACGTATGGCTGCATGAACTTTGTCAATTGTCAGCCGACTTAACAATGAA
. : . : . : . : . : . :
JMFN018P07+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFF008N21+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
rJMFF027B07- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFF027B07+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
rJMFF008N21- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMSF045P12+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN005A19+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFF039B01+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
rJMFF039B01- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN037I17- ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN036H10+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
JMFN001D11+ ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
____________________________________________________________
consensus ATTTTGGCGGCTGATTGGATTCATAACAACTGGAGGGCCAGCAGTCCGAGGCCATGCCTG
. : . : . : . : . : . :
JMFN018P07+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFF008N21+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
rJMFF027B07- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFF027B07+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
rJMFF008N21- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMSF045P12+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN005A19+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFF039B01+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
rJMFF039B01- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN037I17- GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN036H10+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
JMFN001D11+ GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTTTGAAACAGTGTGTGGAATTGTACC
____________________________________________________________
consensus GAACTTCTTGTCAGTCTCTTCCCACCAGGCCTTTTCTGAAACAGTGTGTGGAATTGTACC
. : . : . : . : . : . :
JMFN018P07+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFF008N21+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
rJMFF027B07- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFF027B07+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
rJMFF008N21- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMSF045P12+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN005A19+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFF039B01+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
rJMFF039B01- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN037I17- TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN036H10+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
JMFN001D11+ TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
____________________________________________________________
consensus TCCAAAAATCTTCTTGTCAGAAATAATGTGGTCGAAAACATAAGCAACAACAAATGATCC
. : . : . : . : . : . :
JMFN018P07+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTG
JMFF008N21+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
rJMFF027B07- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFF027B07+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
rJMFF008N21- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMSF045P12+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN005A19+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFF039B01+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
rJMFF039B01- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN037I17- CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN036H10+ CGCAAGAGCCGCAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
JMFN001D11+ CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGTTGAACTCCAATAACGAATGAAGTG
____________________________________________________________
consensus CGCAAGAGCAGAAATTATTTTAGGACCTGACATTGCTGAACTCCAATAACGAATGAAGTG
. : . : . : . : . : . :
JMFF008N21+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGCCTTT
rJMFF027B07- CAGAGATCTTTGGAGAAAATTCGGAAC
JMFF027B07+ CAGAGATCTTTGGAGAAAATTCGGAAC
rJMFF008N21- CAGAGATCTTTGGAGAAAATTCGGAACGACTGCCTTT
JMSF045P12+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTT
JMFN005A19+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCG
JMFF039B01+ CAGAGATCTTTGGAGAAAATTCGGAAC
rJMFF039B01- CAGAGATCTTTGGAGAAAATTCGGAAC
JMFN037I17- CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCG
JMFN036H10+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCG
JMFN001D11+ CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCGATTGCGGCTAT
____________________________________________________________
consensus CAGAGATCTTTGGAGAAAATTCGGAACGACTGTCTTTGACCAGTTTGCGATTGCGGCTAT