Contig 001803:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051G07Sequence630001803 (5)ref|XP_011094649.1|1e-56PREDICTED: CASP-like protein 5A1 [Sesamum indicum]510001803 (5)ref|XP_011094649.1|8e-43PREDICTED: CASP-like protein 5A1 [Sesamum indicum]
JMFN044G03Sequence314001803 (5)ref|XP_004251139.1|7e-13PREDICTED: CASP-like protein 5A2 [Solanum lycopersicum]
JMSF019I07Sequence251001803 (5)747001803 (5)ref|XP_009796294.1|5e-74PREDICTED: CASP-like protein 5A1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF051G07-                                                         CGGAACTAAATCT
                      ____________________________________________________________
consensus                                                            CGGAACTAAATCT
 
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rJMFF051G07-          AAATTTTAATTTATGCAGAGAGTCCCATGACCAAATATGGAAACCATGAAACTTAGAAAT
rJMSF019I07-                                            ATATGGAAACCATGAAACTTAGAAAT
                      ____________________________________________________________
consensus             AAATTTTAATTTATGCAGAGAGTCCCATGACCAAATATGGAAACCATGAAACTTAGAAAT
 
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rJMFF051G07-          TCAGTAGCTGCAATGTCATATAGATTCAGGAATACACACAATTACCCTAAATGTTGATCA
rJMSF019I07-          TCAGTAGCTGCAATGTCATATAGATTCAGGAATACACACAATTACCCTAAATGTTGATCA
                      ____________________________________________________________
consensus             TCAGTAGCTGCAATGTCATATAGATTCAGGAATACACACAATTACCCTAAATGTTGATCA
 
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rJMFF051G07-          TAGTTTAGTATTACACAAAACAGGAAGGCTCATCAGGCATGCACATAAGCACCAACCTCA
rJMSF019I07-          TAGTTTAGTATTACACAAAACAGGAAGGCTCATCAGGCATGCACATAAGCACCAACCTCA
                      ____________________________________________________________
consensus             TAGTTTAGTATTACACAAAACAGGAAGGCTCATCAGGCATGCACATAAGCACCAACCTCA
 
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rJMFF051G07-          TGGGGAAGCGAGGGACCAGAAATTGAGGAAGAAGGATGGAGATGCAGAGAACCAGCTCAG
rJMSF019I07-          TGGGGAAGCGAGGGACCAGAAATTGAGGAAGAAGGATGGAGATGCAGAGAACCAGCTCAG
JMFF051G07+                                         GAAGGATGGAGATGCAGAGAACCAGCTCAG
                      ____________________________________________________________
consensus             TGGGGAAGCGAGGGACCAGAAATTGAGGAAGAAGGATGGAGATGCAGAGAACCAGCTCAG
 
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rJMFF051G07-          GAATGCCATAGCTGTTGCTGACATGAATCTTTTGCAGTGATTCATGGCACATTTATCGAG
rJMSF019I07-          GAATGCCATAGCTGTTGCTGACATGAATCTTTTGCAGTGATTCATGGCACATTTATCGAG
JMFF051G07+           GAATGCCATAGCTGTTGCTGACATGAATCTTTTGCAGTGATTCATGGCACATTTATCGAG
                      ____________________________________________________________
consensus             GAATGCCATAGCTGTTGCTGACATGAATCTTTTGCAGTGATTCATGGCACATTTATCGAG
 
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rJMFF051G07-          GTCGTTCCCGATAAGGACTGTGATACCAGCAGCAGCACAGGCAGCAGTGAATGCTACAGT
rJMSF019I07-          GTCGTTCCCGATAAGGACTGTGATACCAGCAGCAGCACAGGCAGCAGTGAATGTTACAGT
JMFF051G07+           GTCGTTCCCGATAAGGACTGTGATACCAGCAGCAGCACAGGCAGCAGTGAATGCTACAGT
                      ____________________________________________________________
consensus             GTCGTTCCCGATAAGGACTGTGATACCAGCAGCAGCACAGGCAGCAGTGAATGCTACAGT
 
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rJMFF051G07-          GGAGGTGATCCCATCACCGATGGCAAATAGACTAACGACTCCTGTATTTCTAAAACTTCG
rJMSF019I07-          GGAGGTGATCCCATCACCGATGGCAAATAGACTAACGACTCCTGTATTTCTAAAACTTCG
JMFF051G07+           GGAGGTGATCCCATCACCGATGGCAAATAGACTAACGACTCCTGTATTTCTAAAACTTCG
                      ____________________________________________________________
consensus             GGAGGTGATCCCATCACCGATGGCAAATAGACTAACGACTCCTGTATTTCTAAAACTTCG
 
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rJMFF051G07-          CTTCACCAACAGTGCATATATGTCAGTAATGGCAAGCGCCAGGCTCCACAAGATTTGTAA
rJMSF019I07-          CTTCACCAACAGTGCATATATGTCAGTAATGGCAAGCGCCAGGCTCCACAAGATTTGTAA
JMFN044G03+                                                          ACAAGATTTGTAA
JMFF051G07+           CTTCACCAACAGTGCATATATGTCAGTAATGGCAAGCGCCAGGCTCCACAAGATTTGTAA
                      ____________________________________________________________
consensus             CTTCACCAACAGTGCATATATGTCAGTAATGGCAAGCGCCAGGCTCCACAAGATTTGTAA
 
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rJMFF051G07-          GCTGACAGCGGCAACGA                                           
rJMSF019I07-          GCTGACAGCGGCAACGAGGTAGCAGAAGGCGGAGACGGACGGGAAATCGGAGGTTGTGGC
JMFN044G03+           GCTGACAGCGGCAACGAGGTAGCAGAAGGCGGAGACGGACGGGAAATCGGAGGTTGTGGC
JMFF051G07+           GCTGACAGCGGCAACGAGGTAGCAGAAGGCGGAGACGGACGGGAAATCGGAGGTTGTGGC
                      ____________________________________________________________
consensus             GCTGACAGCGGCAACGAGGTAGCAGAAGGCGGAGACGGACGGGAAATCGGAGGTTGTGGC
 
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rJMSF019I07-          CATGACGCATAGAGAAATCAGAGCGAACGCGAGCTGGAAGAGGCGGAGGAAGAGGCCGCC
JMFN044G03+           CATGACGCATAGAGAAATCAGAGCGAACGCGAGCTGGAAGAGGCGGAGGAAGAGGCCGCC
JMSF019I07+                                                       GGAGGAAGAGGCCGCC
JMFF051G07+           CATGACGCATAGAGAAATCAGAGCGAACGCGAGCTGGAAGAGGCGGAGGAAGAGGCCGCC
                      ____________________________________________________________
consensus             CATGACGCATAGAGAAATCAGAGCGAACGCGAGCTGGAAGAGGCGGAGGAAGAGGCCGCC
 
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rJMSF019I07-          GGCAGTACCAGTCATGCCTTGAATATCCTTCATCCTCACCCTCGGCGGCGCGACGATCAC
JMFN044G03+           GGCAGTACCAGTCATGCCTTGAATATCCTTCATCCTCACCCTCGGCGGCGCGACGATCAC
JMSF019I07+           GGCAGTACCAGTCATGCCTTGAATATCCTTCATCNTCACCCTCGGCGGCGCGACGATCAC
JMFF051G07+           GGCAGTACCAGTCATGCCTTGAATATCCTTCATCCTCACCCTCGGCGGCGCGACGATCAC
                      ____________________________________________________________
consensus             GGCAGTACCAGTCATGCCTTGAATATCCTTCATCCTCACCCTCGGCGGCGCGACGATCAC
 
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rJMSF019I07-          CGCCGGAGCCTCCACCGGATGCACCGCCGACCGACTCATCATCATGCTATCAACTTCCCA
JMFN044G03+           CGCCGGAGCCTCCACCGGATGCACCGCCGACCGACTCATCATCATGCTATCAACTTCCCA
JMSF019I07+           CGCCGGAGCCTCCACCGGATGCACCGCCGACCGACTCATCATCATGCTATCAACTTCCCA
JMFF051G07+           CGCCGGAGCCTCCACCGGATGCACCGCCGACCGACTCATCATCATGCTATCAACTTCCCA
                      ____________________________________________________________
consensus             CGCCGGAGCCTCCACCGGATGCACCGCCGACCGACTCATCATCATGCTATCAACTTCCCA
 
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rJMSF019I07-          GCGGCAATCAATCTACAACCGACCAGCAGAAAGGCAGCGGATACTAACAAACCCTAACAC
JMFN044G03+           GCGGCAATCAATCTACAACCGACCAGCAGAAAGGCAGCGGATACTAACAAACCCTAACAC
JMSF019I07+           GCGGCAATCAATCTACAACCGACCAGCAGAAAGGCAGCGGATACTAACAAACCCTAACAC
JMFF051G07+           GCGGCAATCAATCTACAACCGACCAGCAGAAAGGCAGCGGATACTAACAAACCCTAACAC
                      ____________________________________________________________
consensus             GCGGCAATCAATCTACAACCGACCAGCAGAAAGGCAGCGGATACTAACAAACCCTAACAC
 
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rJMSF019I07-          G                                                           
JMFN044G03+           G                                                           
JMSF019I07+           GGAGAGAGCGGTGGTGGAGAACTGAGAAGAGAAGACGCACCGTCACAGCTTCCC      
JMFF051G07+           GGAGAGAGCGGTGGTGGAGAACTGAGAAGAGAAGACGCACCGTCACAGCTTCCCACCCGG
                      ____________________________________________________________
consensus             GGAGAGAGCGGTGGTGGAGAACTGAGAAGAGAAGACGCACCGTCACAGCTTCCCACCCGG