| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045F16 | Sequence | 660 | 001802 (5) | ref|XP_009613591.1| | 147 | PREDICTED: uncharacterized protein LOC104106696 [Nicotiana tomentosiformis] ref| | 609 | 001802 (5) | ref|XP_009796676.1| | 171 | PREDICTED: uncharacterized protein LOC104243213 [Nicotiana sylvestris] ref|XP_00 |
| JMFF051F17 | Sequence | 600 | 001802 (5) | ref|XP_009796676.1| | 108 | PREDICTED: uncharacterized protein LOC104243213 [Nicotiana sylvestris] ref|XP_00 | 571 | 001802 (5) | ref|XP_009796676.1| | 179 | PREDICTED: uncharacterized protein LOC104243213 [Nicotiana sylvestris] ref|XP_00 |
| JMFN010N14 | Sequence | 626 | 001802 (5) | ref|XP_009796676.1| | 152 | PREDICTED: uncharacterized protein LOC104243213 [Nicotiana sylvestris] ref|XP_00 | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF045F16- GCACAACATCAATCTA
____________________________________________________________
consensus GCACAACATCAATCTA
. : . : . : . : . : . :
rJMFF045F16- TGGTCTCTTATTGGCCCCATTGGAACACCGAACAGAAGAAAAATTGCACGAAATTAATAT
rJMFF051F17- ACGAAATTAATAT
____________________________________________________________
consensus TGGTCTCTTATTGGCCCCATTGGAACACCGAACAGAAGAAAAATTGCACGAAATTAATAT
. : . : . : . : . : . :
rJMFF045F16- GAATTTGCTGCGCAATACAAAATGAAATTACAGTTTGGGTTTGACTGACGGACATAATCG
rJMFF051F17- GAATTTGCTGCGCAATACAAAATGAAATTACAGTTTGGGTTTGACTGACGGACATAATCG
____________________________________________________________
consensus GAATTTGCTGCGCAATACAAAATGAAATTACAGTTTGGGTTTGACTGACGGACATAATCG
. : . : . : . : . : . :
rJMFF045F16- GAACAAATTTACAAGTGAACCAATTCTGCTACCATCCCTTTTAACTACCCCCTAATTCAA
rJMFF051F17- GAACAAATTTACAAGTGAACCAATTCTGCTACCATCCCTTTTAACTACCCCCTAATTCAA
____________________________________________________________
consensus GAACAAATTTACAAGTGAACCAATTCTGCTACCATCCCTTTTAACTACCCCCTAATTCAA
. : . : . : . : . : . :
rJMFF045F16- TCATTTCCGTAACGGAAAAAAATATATAACAGACAAAGTTGGGGAAAATCCTGACTCCGT
rJMFF051F17- TCATTTCCGTAACGGAAAAAAATATATAACAGACAAAGTTGGGGAAAATCCTGACTCCGT
____________________________________________________________
consensus TCATTTCCGTAACGGAAAAAAATATATAACAGACAAAGTTGGGGAAAATCCTGACTCCGT
. : . : . : . : . : . :
rJMFF045F16- TAGTCCTTTCATTCTGAATCACTTTCCACGCTGCCCATTGCCTTTAATCCTCTGGCTCTC
rJMFF051F17- TAGTCCTTTCGCTCTGAATCACTTTCCACGCTGCCCATTGCCTTTAATCCTCTGGCTCTC
____________________________________________________________
consensus TAGTCCTTTCGTTCTGAATCACTTTCCACGCTGCCCATTGCCTTTAATCCTCTGGCTCTC
. : . : . : . : . : . :
rJMFF045F16- TTCTTAGTACTCTTCTTCTCTCTGACTTCATACCTCTCTAAAGACATGTCGGTTAACCAT
rJMFF051F17- TTCTTAGTACTCTTCTTCTCTCTGACTTCATACCTCTCTAAAGACATGTCGGTTAACCAT
____________________________________________________________
consensus TTCTTAGTACTCTTCTTCTCTCTGACTTCATACCTCTCTAAAGACATGTCGGTTAACCAT
. : . : . : . : . : . :
rJMFF045F16- GCTCCCGGACTCACCAAAAGCAAAGTTCTTTGGATGACTTTAGCCCTCTTCTTAGGTCTT
rJMFF051F17- GCTCCCGGACTCACCAAAAGCAAAGTTCTTTGGATGACTTTAGCCCTCTTCTTAGGTCTT
____________________________________________________________
consensus GCTCCCGGACTCACCAAAAGCAAAGTTCTTTGGATGACTTTAGCCCTCTTCTTAGGTCTT
. : . : . : . : . : . :
rJMFF045F16- TGAGGAAGCTTACACCCTTTCATGGCCATGAAATCCTCTTCCTTTTCCTTGCTTGACAAC
rJMFF051F17- TGAGGAAGCTTACACCCTTTCATGGCCATGAAATCCTCTTCCTTTTCCTTGCTTGACAAC
JMFN010N14+ AAGCTTACACCCTTTCATGGCCATGAAATCCTCTTCCTTTTCCTTGCTTGACAAC
JMFF045F16+ AAGCTTACACCCTTTCATGGCCATGAATCCTCTTCCCTTTTCCTTGCTTGACAAC
____________________________________________________________
consensus TGAGGAAGCTTACACCCTTTCATGGCCATGAAATCCTCTTCCTTTTCCTTGCTTGACAAC
. : . : . : . : . : . :
rJMFF045F16- GATATATACAGCTTCGGCCAAACCACCCCTCCTCCTCCTCTATTGCTGTCGTCTCCGGCG
rJMFF051F17- GATATATACAGCTTCGGCCAAACCACCCCTCCTCCTCCTCTATTGCTGTCGTCTCCGGCG
JMFN010N14+ GATATATACAGCTTCGGCCAAACCACCCCTCCTCCTCCTCTATTGCTGTCGTCTCCGGCG
JMFF045F16+ GATATATACAGCTTCGGCCAAACCACCCCTCCTCCTCCTCTATTGCTGTCGTCTCCGGCG
JMFF051F17+ GATATATACAGCTTCGGCCAACCCACCCCTCCTCCTCCTCTATTGCTGTCGTCTCCGGCG
____________________________________________________________
consensus GATATATACAGCTTCGGCCAAACCACCCCTCCTCCTCCTCTATTGCTGTCGTCTCCGGCG
. : . : . : . : . : . :
rJMFF045F16- TGATTTCCCCCGCCGGCGTCCGCCGCTGCAACCTTCCCATTTTCCTCCGCCGA
rJMFF051F17- TGATTTCCCCCGCCAGCGTCCGCCGCNTGCACCTTCCCATTTTCCTCCGCCGACCCTCTC
JMFN010N14+ TGATTTCCCCCGCCGGCGTCCGCCGCTGCAACCTTCCCATTTTCCTCCGCCGACCCTCTC
JMFF045F16+ TGATTTCCCCCGCCGGCGTCCGCCGCTGCAACCTTCCCATTTTCCTCCGCCGACCCTCTC
JMFF051F17+ TGATTTCCCCCGCCAGCGTCCGCCGCTGCAACCTTCCCATTTTCCTCCGCCGACCCTCTC
____________________________________________________________
consensus TGATTTCCCCCGCCGGCGTCCGCCGCTGCAACCTTCCCATTTTCCTCCGCCGACCCTCTC
. : . : . : . : . : . :
rJMFF051F17- GTCGGGTA
JMFN010N14+ GTCGGGTAACACCGTTCCTCCTTCTCCGGCGACCTCGACGCACTCCTCCGGTTCTCCGAT
JMFF045F16+ GTCGGGTAACACCGTTCCTCCTTCTCCGGCGACCTCGACGCACTCCTCCGGTTCTCCGAT
JMFF051F17+ GTCGGGTAACACCGTTCCTCCTTCTCCGGCGACCTCGACGCACTCCTCCGGTTCTCCGAT
____________________________________________________________
consensus GTCGGGTAACACCGTTCCTCCTTCTCCGGCGACCTCGACGCACTCCTCCGGTTCTCCGAT
. : . : . : . : . : . :
JMFN010N14+ CTCAACGCCGCCGTCTCAGAATTCCTGGTGTGGCGTGGCGGGAGAAAAGCGGCGTCTTTG
JMFF045F16+ CTCAACGCCGCCGTCTCAGAATTCCTGGTGTGGCGTGGCGGGAGAAAAGCGGCGTCTTTG
JMFF051F17+ CTCAACGCCGCCGTCTCAGAATTCCTGGTGTGGCGTGGCGGGAGAAAAGCGGCGTCTTTG
____________________________________________________________
consensus CTCAACGCCGCCGTCTCAGAATTCCTGGTGTGGCGTGGCGGGAGAAAAGCGGCGTCTTTG
. : . : . : . : . : . :
JMFN010N14+ GCGGAGAGGGTGAGGAAGCGAGACGAGATTTTCCGGCGAAGCCTGGTGGCGTTTGAAGAA
JMFF045F16+ GCGGAGAGGGTGAGGAAGCGAGACGAGATTTTCCGGCGAAGCCTGGTGGCGTCTGAAGAA
JMFF051F17+ GCGGAGAGGGTGAGGAAGCGAGACGAGATTTTCCGGCGAAGCCTGGTGGCGTCTGAAGAA
____________________________________________________________
consensus GCGGAGAGGGTGAGGAAGCGAGACGAGATTTTCCGGCGAAGCCTGGTGGCGTCTGAAGAA
. : . : . : . : . : . :
JMFN010N14+ GAAGGGTCAGGGCCTCTAACTCTCACACATCGGAGTCTCTTTCTGCTCCCCCACTGTAAG
JMFF045F16+ GAAGGGTCAGGGCCTCTAACTCTCACACATCGGAGTCTCTTTCTGCTCCCCCACTGTAAG
JMFF051F17+ GAAGGGTCAGGGCCTCTAACTCTCACACATCGGAGTCTCTTTCTGCTCCCCCACTGTAAG
____________________________________________________________
consensus GAAGGGTCAGGGCCTCTAACTCTCACACATCGGAGTCTCTTTCTGCTCCCCCACTGTAAG
. : . : . : . : . : . :
JMFN010N14+ AAATACTCCGTTTCCGCCGCTCTCGGGTTCTTGCCTTCCTTCTCCATCCCTCAATTCATA
JMFF045F16+ AAATACTCCGTTTCCGCCGCTCTCGGGTTCTTGCCTTCCTTCTCCATCCCTCAATTCATA
JMFF051F17+ AAATACTCCGTTTCCGCCGCTCTCGGGTTCTTGCCTTCCTTCTCCATCCCTCAATTCATA
____________________________________________________________
consensus AAATACTCCGTTTCCGCCGCTCTCGGGTTCTTGCCTTCCTTCTCCATCCCTCAATTCATA
. : . : . : . : . : . :
JMFN010N14+ TAATCCTGAAACCCAAAAAAAATCCCAGAAATGTTGAAATTATCCTCAAATGACAGGAAA
JMFF045F16+ TAATCCTGAAACCCAAAAAAAATCCCAGAAATGTTGAAATTATCCTCAAATGACAGGAAA
JMFF051F17+ TAATCCTGAAACCCAAAAAAAATCCCAGAAATGTTGAAATTATCCTCAAATGACAGGAAA
____________________________________________________________
consensus TAATCCTGAAACCCAAAAAAAATCCCAGAAATGTTGAAATTATCCTCAAATGACAGGAAA
. : . : . : . : . : . :
JMFN010N14+ CCCAGATTCTGGATTATGAAGGAAACCTCCGATTATCTATGAAATTGAAGATTTTGAAGG
JMFF045F16+ CCCAGATTCTGGATTATGAAGGAAACCTCCGATTATCTATGAAATTGAAGATTTTGAAGG
JMFF051F17+ CCCAGATTCTGGATTATGAAGGAAACCTCCGATTATCTATGAAATTGAAGATTTTGAAGG
____________________________________________________________
consensus CCCAGATTCTGGATTATGAAGGAAACCTCCGATTATCTATGAAATTGAAGATTTTGAAGG
. : . : . : . : . : . :
JMFN010N14+ TGGGGTGTGTGTGT
JMFF045F16+ TGGGGTGTGTGTGTGTTCTGTTTCTCTGCTTCTTCTCTGCCTCTGTTTGCTCTTTTCCGG
JMFF051F17+ TGGGGTGTGTGTGTGTTCTGTTTCTCTGCTTCTTCTCTGCCTCTGTTTGCTCTTTTCCGG
____________________________________________________________
consensus TGGGGTGTGTGTGTGTTCTGTTTCTCTGCTTCTTCTCTGCCTCTGTTTGCTCTTTTCCGG