| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025P16 | Sequence | 566 | 001801 (3) | emb|CDP07525.1| | 5e-77 | unnamed protein product [Coffea canephora] | 715 | 009863 (3) | ref|XP_007017515.1| | 8e-77 | Glucan endo-1,3-beta-glucosidase 7-beta-glucanase 7 isoform 2 [Theobroma cacao] |
| JMFF051D03 | Sequence | 607 | 001801 (3) | ref|XP_009758633.1| | 1e-83 | PREDICTED: glucan endo-1,3-beta-glucosidase 7-like isoform X2 [Nicotiana sylves | 523 | 009863 (3) | ref|XP_002509479.1| | 2e-31 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gb|EEF5 |
| JMSF027P14 | Sequence | 649 | 001801 (3) | ref|XP_009758633.1| | 4e-95 | PREDICTED: glucan endo-1,3-beta-glucosidase 7-like isoform X2 [Nicotiana sylves | 777 | 015062 | ref|XP_006341099.1| | 182 | PREDICTED: rho GTPase-activating protein 1-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF027P14+ CTCTGGAACGCG
____________________________________________________________
consensus CTCTGGAACGCG
. : . : . : . : . : . :
JMSF027P14+ AAAAACGGGTAAGGGTTGATCAAGAAAGGAGCGCCGGTGGCGTCTATAAAGCTGAGCAAG
JMFF051D03+ GAGCAAG
____________________________________________________________
consensus AAAAACGGGTAAGGGTTGATCAAGAAAGGAGCGCCGGTGGCGTCTATAAAGCTGAGCAAG
. : . : . : . : . : . :
JMSF027P14+ TCTTTCAGGGAGTCCGTTATGGCCGGATCGAATCTCCCGGACGACGGCGGCTCCGAGGAG
JMFF025P16+ TCTCCCGGACGACGGCGGCTCCGAGGAG
JMFF051D03+ TCTTTCAGGGAGTCCGTTATGGCCGGATCGAATCTCCCGGACGACGGCGGCTCCGAGGAG
____________________________________________________________
consensus TCTTTCAGGGAGTCCGTTATGGCCGGATCGAATCTCCCGGACGACGGCGGCTCCGAGGAG
. : . : . : . : . : . :
JMSF027P14+ ACCAGCATAGACATCCCGTGGACCGTCGAAACCTTGATTTTCCCTCCGACGGAGGCGGAA
JMFF025P16+ ACCAGCATAGACATCCCGTGGACCGTCGAAACCTTGATTTTCCCTCCGACGGAGGCGGAA
JMFF051D03+ ACCAGCATAGACATCCCGTGGACCGTCGAAACCTTGATTTTCCCTCCGACGGAGGCGGAA
____________________________________________________________
consensus ACCAGCATAGACATCCCGTGGACCGTCGAAACCTTGATTTTCCCTCCGACGGAGGCGGAA
. : . : . : . : . : . :
JMSF027P14+ TTAAGTGCGTTCTGGAGATTCTGCATCGCCGGCAAGAGCTGGGTGATCAGATTCCGGTCG
JMFF025P16+ TTAAGTGCGTTCTGGAGATTCTGCATCGCCGGCAAGAGCTGGGTGATCAGATTCCGGTCG
JMFF051D03+ TTAAGTGCGTTCTGGAGATTCTGCATCGCCGGCAAGAGCTGGGTGATCAGATTCCGGTCG
____________________________________________________________
consensus TTAAGTGCGTTCTGGAGATTCTGCATCGCCGGCAAGAGCTGGGTGATCAGATTCCGGTCG
. : . : . : . : . : . :
JMSF027P14+ CCGGAGTACAGAATCTCATTCCCAACGTTGATGGTCATGATCTTGCTGGCCGGGTAGAAG
JMFF025P16+ CCGGAGTACAGAATCTCATTCCCAACGTTGATGGTCATGATCTTGCTGGCCGGGTAGAAG
JMFF051D03+ CCGGAGTACAGAATCTCATTCCCAACGTTGATGGTCATGATCTTGCTGGCCGGGTAGAAG
____________________________________________________________
consensus CCGGAGTACAGAATCTCATTCCCAACGTTGATGGTCATGATCTTGCTGGCCGGGTAGAAG
. : . : . : . : . : . :
JMSF027P14+ GCAAGAACGTTGGCACCTATCCAACTCTTGGCATAGCCGGGGTCGGCGGCCATCGCCGGA
JMFF025P16+ GCAAGAACGTTGGCACCTATCCAACTCTTGGCATAGCCGGGGTCGGCGGCCATCGCCGGA
JMFF051D03+ GCAAGAACGTTGGCACCTATCCAACTCTTGGCATAGCCGGGGTCGGCGGCCATCGCCGGA
____________________________________________________________
consensus GCAAGAACGTTGGCACCTATCCAACTCTTGGCATAGCCGGGGTCGGCGGCCATCGCCGGA
. : . : . : . : . : . :
JMSF027P14+ ATATCACCGTTAGCCACTCCGATCATGATCCCAATGCCCGTATTCGCTAACGCTTTTATC
JMFF025P16+ ATATCACCGTTAGCCACTCCGATCATGATCCCAATGCCCGTATTCGCTAACGCTTTTATC
JMFF051D03+ ATATCACCGTTAGCCACTCCGATCATGATCCCAATGCCCGTATTCGCTAACGCTTTTATC
____________________________________________________________
consensus ATATCACCGTTAGCCACTCCGATCATGATCCCAATGCCCGTATTCGCTAACGCTTTTATC
. : . : . : . : . : . :
JMSF027P14+ ATCGCCGGGTCCGCTCCGTACAACCGAACCTTTTCAATGGAAGTAGACTGCAGGAGCTTA
JMFF025P16+ ATCGCCGGGTCCGCTCCGTACAACCGAACCTTTTCAATGGAAGTAGACTGCAGGAGCTTA
JMFF051D03+ ATCGCCGGGTCCGCTCCGTACAACCGAACCTTTTCAATGGAAGTAGACTGCAGGAGCTTA
____________________________________________________________
consensus ATCGCCGGGTCCGCTCCGTACAACCGAACCTTTTCAATGGAAGTAGACTGCAGGAGCTTA
. : . : . : . : . : . :
JMSF027P14+ GCCGTCGCCTCCGGCGCCGGCAGATTATTCGCCACTTGGCCATAATTCACCCCAATGAAT
JMFF025P16+ GCCGTCGCCTCCGGCGCCGGCAGATTATTCGCCACTTGGCCATAATTCACCCCAATGAAT
JMFF051D03+ GCCGTCGCCTCCGGCGCCGGCAGATTATTCGCCACTTGGCCATAATTCACCCCAATGAAT
____________________________________________________________
consensus GCCGTCGCCTCCGGCGCCGGCAGATTATTCGCCACTTGGCCATAATTCACCCCAATGAAT
. : . : . : . : . : . :
JMSF027P14+ GACTGAGCATCTGAAAGCTGGAAAAGGAAGAGAAATAAGAAATATGAACTGTAAAGAAGA
JMFF025P16+ GACTGAGCATCTGAAAGCTGGAAAAGGAAGAGAAATAAGAAATATGAACTGTAAAGAAGA
JMFF051D03+ GACTGAGCATCTGAAAGCTGGAAAAGGGAGAGAAATAAGAAATATGAACTGTAAAGAAGA
____________________________________________________________
consensus GACTGAGCATCTGAAAGCTGGAAAAGGAAGAGAAATAAGAAATATGAACTGTAAAGAAGA
. : . : . : . : . : . :
JMSF027P14+ TTTGCCATGCTGTAATGCTCCAATCTGTTTGGCTTT
JMFF025P16+ TTTGCCATGCTGTAATGCTCCAATCTGTTTGGCTTTGGGAGGACGACGATGGAAT
JMFF051D03+ TTTGCCATGCTGTAATGCTCCAATCTGTTTGGCTTTGGGAGGACGACGATGGAATAATGA
____________________________________________________________
consensus TTTGCCATGCTGTAATGCTCCAATCTGTTTGGCTTTGGGAGGACGACGATGGAATAATGA