Contig 001800:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS015C01+                                                           GTGGTGACCGGC
JMFF050M23+                                                                 ACCGGC
                      ____________________________________________________________
consensus                                                             GTGGTGACCGGC
 
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JMFS015C01+           AACCGGCTCGAAGAGCGGGTTAGCGCCGTTTCTTACGTAAATGCCGTTAATGCATTCCGG
JMFF050M23+           AACCGGCTCGAAGAGCGGGTTAGCGCCGTTTCTTACGTAAATGCCGTTAATGCATTCCGG
                      ____________________________________________________________
consensus             AACCGGCTCGAAGAGCGGGTTAGCGCCGTTTCTTACGTAAATGCCGTTAATGCATTCCGG
 
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JMFS015C01+           CACGGCGCCGACCACCGGGAGGTTATGCCGCACCGCCTGCTCCGGCACGGGGGCGAAGTT
JMFF050M23+           CACGGCGCCGACCACCGGGAGGTTATGCCGCACCGCCTGCTCCGGCACGGGGGCGAAGTT
                      ____________________________________________________________
consensus             CACGGCGCCGACCACCGGGAGGTTATGCCGCACCGCCTGCTCCGGCACGGGGGCGAAGTT
 
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JMFS015C01+           CCCAGATATTTGGACGCCCGGATCAGCCGTCTTGGGGAGCGGGTGTTTCCTCTCCACCGC
JMFF050M23+           CCCAGATATTTGGACGCCCGGATCAGCCGTCTTGGGGAGCGGGTGTTTCCTCTCCACCGC
                      ____________________________________________________________
consensus             CCCAGATATTTGGACGCCCGGATCAGCCGTCTTGGGGAGCGGGTGTTTCCTCTCCACCGC
 
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JMFS015C01+           CACCAACGCGCTCTCCACCGCGTTCAGCGCCGCCGAGGCCGCCCTCTGAAACACGTTCCA
JMFF050M23+           CACCAACGCGCTCTCCACCGCGTTCAGCGCCGCCGAGGCCGCCCTCTGAAACACGTTCCA
                      ____________________________________________________________
consensus             CACCAACGCGCTCTCCACCGCGTTCAGCGCCGCCGAGGCCGCCCTCTGAAACACGTTCCA
 
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JMFS015C01+           GTGCGGCGGCGGCGCCGCCGCCTGAGAAGTATCCGGCGGCGCCGGTGCCGGCGCCGGAGA
JMFF050M23+           GTGCGGCGGCGGCGCCGCCGCCTGAGAAGTATCCGGCGGCGCCGGTGCCGGCGCCGGAGA
                      ____________________________________________________________
consensus             GTGCGGCGGCGGCGCCGCCGCCTGAGAAGTATCCGGCGGCGCCGGTGCCGGCGCCGGAGA
 
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JMFS015C01+           TTCCTTCTGGAAAGGATTCTTAGGGAAAGTGAGGACTGATGGGGAGTGGATTACTGCGCC
JMFF050M23+           TTCCTTCTGGAAAGGATTCTTAGGGAAAGTGAGGACTGATGGGGAGTGGATTACTGCGCC
                      ____________________________________________________________
consensus             TTCCTTCTGGAAAGGATTCTTAGGGAAAGTGAGGACTGATGGGGAGTGGATTACTGCGCC
 
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JMFS015C01+           ACACCGAATTTGAGCTCTCCTATTAGCCATGGAAACGGACTTTGAAGTGAAACCCAAATC
JMFF050M23+           ACACCGAATTTGAGCTCTCCTATTAGCCATGGAAACGGACTTTGAAGTGAAACCCAAATC
                      ____________________________________________________________
consensus             ACACCGAATTTGAGCTCTCCTATTAGCCATGGAAACGGACTTTGAAGTGAAACCCAAATC
 
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JMFS015C01+           CACTTTTAAAGAAGGAGAAGAAGAAGAAAATGGCGAAGAGATTTGGATTCTACTAGCAGC
JMFF050M23+           CACTTTTAAAGAAGGAGAAGAAGAAGAAAATGGCGAAGAGATTTGGATTCTACTAGCAGC
                      ____________________________________________________________
consensus             CACTTTTAAAGAAGGAGAAGAAGAAGAAAATGGCGAAGAGATTTGGATTCTACTAGCAGC
 
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JMFS015C01+           CATTATATTCTTTGTTGTTTTAAGGAGAAAAAGTTGGCAATTTTATTGTGAATTTGAGTA
JMFF050M23+           CATTATATTCTTTGTTGTTTTAAGGAGAAAAAGTTGGCAATTTTATTGTGAATTTGAGTA
                      ____________________________________________________________
consensus             CATTATATTCTTTGTTGTTTTAAGGAGAAAAAGTTGGCAATTTTATTGTGAATTTGAGTA
 
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JMFS015C01+           AACCTCGTAGTGAAGGGAGAGAAGAGAAGAGAAGAGAAGA                    
JMFF050M23+           AACCTCGTAGTGAAGGGAGAGAAGAGAAGAGAAGAGAAGAGGAAGGGAAGGGTTGTTTTC
                      ____________________________________________________________
consensus             AACCTCGTAGTGAAGGGAGAGAAGAGAAGAGAAGAGAAGAGGAAGGGAAGGGTTGTTTTC