Contig 001799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020L23Sequence531001799 (5)ref|XP_009599717.1|2e-37PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl776004165 (9)gb|KHG29399.1|2e-90hypothetical protein F383_12832 [Gossypium arboreum]
JMFF037I03Sequence593001799 (5)ref|XP_009599717.1|1e-53PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl804004165 (9)gb|KHG29399.1|3e-93hypothetical protein F383_12832 [Gossypium arboreum]
JMFF050G18Sequence608001799 (5)ref|XP_009599717.1|2e-48PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl571004165 (9)ref|XP_006469672.1|1e-46PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl
JMSF023H02Sequence621001799 (5)ref|XP_009599717.1|1e-58PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl254005952 (12)ref|XP_006377038.1|5e-48hypothetical protein POPTR_0012s12320g [Populus trichocarpa] gb|ERP54835.1| hypo
JMSF046K15Sequence764001799 (5)ref|XP_009599717.1|1e-79PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl792004165 (9)gb|KHG29399.1|5e-84hypothetical protein F383_12832 [Gossypium arboreum]

Alignment

This contig is upended


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JMSF046K15+                                                          TGGGTTTCTCTTT
                      ____________________________________________________________
consensus                                                            TGGGTTTCTCTTT
 
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JMSF046K15+           CTGTTCATCAATTGAAGATGGCTGTGGGGTATCTTTTCCGGATGGCTTCTCAGATGGAGC
                      ____________________________________________________________
consensus             CTGTTCATCAATTGAAGATGGCTGTGGGGTATCTTTTCCGGATGGCTTCTCAGATGGAGC
 
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JMSF046K15+           CACATGATCCACACCTCCACTAGATTTTGAAATGATAGCAACCTTGGTACCTGGTTCCAC
                      ____________________________________________________________
consensus             CACATGATCCACACCTCCACTAGATTTTGAAATGATAGCAACCTTGGTACCTGGTTCCAC
 
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JMSF023H02+                    TTCCTTGACTACATACTCCTGTATTACACCGGCTTCAGGACTGGTAACATC
JMFF037I03+                                               ACCGGCTTCAGGACTGGTAACATC
JMSF046K15+           AGTATCCCCTTCCTTGACTACATACTCCTGTATTACACCGGCTTCAGGACTGGTAACATC
JMFF050G18+                                                               GTAACATC
                      ____________________________________________________________
consensus             AGTATCCCCTTCCTTGACTACATACTCCTGTATTACACCGGCTTCAGGACTGGTAACATC
 
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JMSF023H02+           AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
JMFF037I03+           AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
JMSF046K15+           AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
JMFF020L23+                                          ATTGCCTCATCAACTTCTACTCTATCACC
JMFF050G18+           AATGTTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
                      ____________________________________________________________
consensus             AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
 
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JMSF023H02+           GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMFF037I03+           GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMSF046K15+           GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMFF020L23+           GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMFF050G18+           GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
                      ____________________________________________________________
consensus             GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
 
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JMSF023H02+           AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMFF037I03+           AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMSF046K15+           AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMFF020L23+           AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMFF050G18+           AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
                      ____________________________________________________________
consensus             AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
 
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JMSF023H02+           TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMFF037I03+           TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMSF046K15+           TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMFF020L23+           TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMFF050G18+           TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
                      ____________________________________________________________
consensus             TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
 
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JMSF023H02+           TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMFF037I03+           TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMSF046K15+           TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMFF020L23+           TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMFF050G18+           TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
                      ____________________________________________________________
consensus             TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
 
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JMSF023H02+           CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMFF037I03+           CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMSF046K15+           CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMFF020L23+           CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMFF050G18+           CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
                      ____________________________________________________________
consensus             CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
 
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JMSF023H02+           CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMFF037I03+           CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMSF046K15+           CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMFF020L23+           CGATTTTCCTAATG--GAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMFF050G18+           CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
                      ____________________________________________________________
consensus             CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
 
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JMSF023H02+           CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMFF037I03+           CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMSF046K15+           CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMFF020L23+           CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMFF050G18+           CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
                      ____________________________________________________________
consensus             CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
 
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JMSF023H02+           TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMFF037I03+           TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMSF046K15+           TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMFF020L23+           TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMFF050G18+           TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
                      ____________________________________________________________
consensus             TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
 
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JMSF023H02+           AGAATTTTCGTCAATACTTCTCTAACC                                 
JMFF037I03+           AGAATTTTCGTCAATACTTCTCTAACC                                 
JMSF046K15+           AGAATTTTCGTCAATACTTCTCTAACC                                 
JMFF020L23+           AGAATTTTCGTCAATACTTCTCT                                     
JMFF050G18+           AGAATTTTCGTCAATACTTCTCTAACCTTCXXXXXXXXXXXXXXXXXXCCTTATTTAACT
                      ____________________________________________________________
consensus             AGAATTTTCGTCAATACTTCTCTAACCTTCNNNNNNNNNNNNNNNNNNCCTTATTTAACT