Contig 001799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020L23Sequence531001799 (5)ref|XP_009599717.1|2e-37PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl776004165 (9)gb|KHG29399.1|2e-90hypothetical protein F383_12832 [Gossypium arboreum]
JMFF037I03Sequence593001799 (5)ref|XP_009599717.1|1e-53PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl804004165 (9)gb|KHG29399.1|3e-93hypothetical protein F383_12832 [Gossypium arboreum]
JMFF050G18Sequence608001799 (5)ref|XP_009599717.1|2e-48PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl571004165 (9)ref|XP_006469672.1|1e-46PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl
JMSF023H02Sequence621001799 (5)ref|XP_009599717.1|1e-58PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl254005952 (12)ref|XP_006377038.1|5e-48hypothetical protein POPTR_0012s12320g [Populus trichocarpa] gb|ERP54835.1| hypo
JMSF046K15Sequence764001799 (5)ref|XP_009599717.1|1e-79PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl792004165 (9)gb|KHG29399.1|5e-84hypothetical protein F383_12832 [Gossypium arboreum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046K15+ TGGGTTTCTCTTT
                      ____________________________________________________________
consensus TGGGTTTCTCTTT
 
. : . : . : . : . : . :
JMSF046K15+ CTGTTCATCAATTGAAGATGGCTGTGGGGTATCTTTTCCGGATGGCTTCTCAGATGGAGC
                      ____________________________________________________________
consensus CTGTTCATCAATTGAAGATGGCTGTGGGGTATCTTTTCCGGATGGCTTCTCAGATGGAGC
 
. : . : . : . : . : . :
JMSF046K15+ CACATGATCCACACCTCCACTAGATTTTGAAATGATAGCAACCTTGGTACCTGGTTCCAC
                      ____________________________________________________________
consensus CACATGATCCACACCTCCACTAGATTTTGAAATGATAGCAACCTTGGTACCTGGTTCCAC
 
. : . : . : . : . : . :
JMSF023H02+ TTCCTTGACTACATACTCCTGTATTACACCGGCTTCAGGACTGGTAACATC
JMFF037I03+ ACCGGCTTCAGGACTGGTAACATC
JMSF046K15+ AGTATCCCCTTCCTTGACTACATACTCCTGTATTACACCGGCTTCAGGACTGGTAACATC
JMFF050G18+ GTAACATC
                      ____________________________________________________________
consensus AGTATCCCCTTCCTTGACTACATACTCCTGTATTACACCGGCTTCAGGACTGGTAACATC
 
. : . : . : . : . : . :
JMSF023H02+ AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
JMFF037I03+ AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
JMSF046K15+ AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
JMFF020L23+ ATTGCCTCATCAACTTCTACTCTATCACC
JMFF050G18+ AATGTTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
                      ____________________________________________________________
consensus AATTGTTACCTTATCTGTTTCAACCTGAGCAATTGCCTCATCAACTTCTACTCTATCACC
 
. : . : . : . : . : . :
JMSF023H02+ GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMFF037I03+ GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMSF046K15+ GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMFF020L23+ GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
JMFF050G18+ GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
                      ____________________________________________________________
consensus GGGTTTCTTCAAGAATGTAGCAAGTGTGCCATCAGTTATGGATTCACCCATATGTGGAAC
 
. : . : . : . : . : . :
JMSF023H02+ AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMFF037I03+ AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMSF046K15+ AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMFF020L23+ AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
JMFF050G18+ AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
                      ____________________________________________________________
consensus AACAGCATCAACCAGATCAGCTCCACTTGAACAAAATGCTCTATTCCAAATCTGTAGTGT
 
. : . : . : . : . : . :
JMSF023H02+ TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMFF037I03+ TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMSF046K15+ TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMFF020L23+ TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
JMFF050G18+ TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
                      ____________________________________________________________
consensus TACACCTGGATGAAGATTAGATATAGCTCCCCTTTGTGCTCGCAAATTCATTGTGTTCCC
 
. : . : . : . : . : . :
JMSF023H02+ TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMFF037I03+ TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMSF046K15+ TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMFF020L23+ TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
JMFF050G18+ TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
                      ____________________________________________________________
consensus TGGTAAATTGAGGTGGCAGAAATTTCGAGCTTGACCACATCCTATTGGATGAATTAATAT
 
. : . : . : . : . : . :
JMSF023H02+ CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMFF037I03+ CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMSF046K15+ CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMFF020L23+ CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
JMFF050G18+ CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
                      ____________________________________________________________
consensus CTCTTCAGCCACAACGGAGCAAGCTCTTGGGGTCAATAATCCAGGTCGAACTGTATGCAG
 
. : . : . : . : . : . :
JMSF023H02+ CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMFF037I03+ CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMSF046K15+ CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMFF020L23+ CGATTTTCCTAATG--GAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
JMFF050G18+ CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
                      ____________________________________________________________
consensus CGATTTTCCTAATGCCGAAGCAGATGAGGCGCTGGAAGCGACTTTACGCCGTAAAACGCC
 
. : . : . : . : . : . :
JMSF023H02+ CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMFF037I03+ CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMSF046K15+ CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMFF020L23+ CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
JMFF050G18+ CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
                      ____________________________________________________________
consensus CAACATCGCGGCGCAGATCTCTTATCACAGCTGATTGCTCTTCAATGGAGAAGATCAGAG
 
. : . : . : . : . : . :
JMSF023H02+ TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMFF037I03+ TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMSF046K15+ TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMFF020L23+ TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
JMFF050G18+ TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
                      ____________________________________________________________
consensus TGGGGATACGGTTCGGAGAGCCGCCGGGAGATTGAATGTAAATAAAAACAAAGTCGCCGA
 
. : . : . : . : . : . :
JMSF023H02+ AGAATTTTCGTCAATACTTCTCTAACC
JMFF037I03+ AGAATTTTCGTCAATACTTCTCTAACC
JMSF046K15+ AGAATTTTCGTCAATACTTCTCTAACC
JMFF020L23+ AGAATTTTCGTCAATACTTCTCT
JMFF050G18+ AGAATTTTCGTCAATACTTCTCTAACCTTCXXXXXXXXXXXXXXXXXXCCTTATTTAACT
                      ____________________________________________________________
consensus AGAATTTTCGTCAATACTTCTCTAACCTTCNNNNNNNNNNNNNNNNNNCCTTATTTAACT