Contig 001798:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025J23Sequence518001798 (5)ref|XP_006362574.1|2e-15PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum691004164 (3)ref|XP_011070823.1|2e-33PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMFF031A04Sequence441001798 (5)ref|XP_006362574.1|2e-14PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum505004164 (3)ref|XP_011070823.1|1e-11PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMFF050G08Sequence593001798 (5)ref|XP_006362574.1|1e-16PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum515004164 (3)ref|XP_011070823.1|4e-11PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMFS121B05Sequence567001798 (5)ref|XP_006362574.1|7e-16PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum
JMFS128B04Sequence610001798 (5)ref|NP_001234202.1|2e-27NRC1 [Solanum lycopersicum] gb|ABC26878.1| NRC1 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS128B04+ CGAGTAAAAAACTCATATTGAATATCACTATCATTGAATACCATTTTAGTCAATGTG
                      ____________________________________________________________
consensus CGAGTAAAAAACTCATATTGAATATCACTATCATTGAATACCATTTTAGTCAATGTG
 
. : . : . : . : . : . :
JMFS128B04+ GTTTTGCCCAACCCAGCCATTCCGACAATTGAAATGAAAGTCGTATCTTTTGATCCTTTA
                      ____________________________________________________________
consensus GTTTTGCCCAACCCAGCCATTCCGACAATTGAAATGAAAGTCGTATCTTTTGATCCTTTA
 
. : . : . : . : . : . :
JMFS128B04+ GTGAGAAGTTCCTTTATAGTTTTAGCCTCACCGTCAAAACCTACCACATCATCTTCTTCC
JMFS121B05+ GTTCCTTTATAGTTTTAGCCTCACCGTCAAAACCTACCACATCATCTTCTTCC
JMFF050G08+ GTTCCTTTATAGTTNTAGCTTCACCGTCAAAACNTACCACATCATCTTCTTCC
                      ____________________________________________________________
consensus GTGAGAAGTTCCTTTATAGTTTTAGCCTCACCGTCAAAACCTACCACATCATCTTCTTCC
 
. : . : . : . : . : . :
JMFS128B04+ ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
JMFS121B05+ ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
JMFF025J23+ GACTGCGGGCTGATGATTATTTAGCGAACCGGCTNGGAGTAAC
JMFF031A04+ GGAGTAAC
JMFF050G08+ ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
                      ____________________________________________________________
consensus ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
 
. : . : . : . : . : . :
JMFS128B04+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
JMFS121B05+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
JMFF025J23+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCNTAATGCTTTCGATC
JMFF031A04+ TGGAGGGGGTGGGCGTAATCTNGACGGATTTTCTNGGCCCTATCCTTAATGCTTTCGATC
JMFF050G08+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
                      ____________________________________________________________
consensus TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
 
. : . : . : . : . : . :
JMFS128B04+ TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
JMFS121B05+ TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
JMFF025J23+ TCCCTGGCAGATAGATTAACCNTGGTATAATAAGCAGCTTTTTCCGCCCAACTCTTGAGG
JMFF031A04+ TCCCNGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
JMFF050G08+ TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
                      ____________________________________________________________
consensus TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
 
. : . : . : . : . : . :
JMFS128B04+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFS121B05+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFF025J23+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFF031A04+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFF050G08+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
                      ____________________________________________________________
consensus GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
 
. : . : . : . : . : . :
JMFS128B04+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFS121B05+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFF025J23+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFF031A04+ TCCCTNGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFF050G08+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
                      ____________________________________________________________
consensus TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
 
. : . : . : . : . : . :
JMFS128B04+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFS121B05+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFF025J23+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFF031A04+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFF050G08+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
                      ____________________________________________________________
consensus TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
 
. : . : . : . : . : . :
JMFS128B04+ TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFS121B05+ TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFF025J23+ TCATCCACCTGATCCNTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFF031A04+ TCATCCACCTGATCCNTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFF050G08+ TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
                      ____________________________________________________________
consensus TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
 
. : . : . : . : . : . :
JMFS128B04+ ACCTTGTTTATCA
JMFS121B05+ ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
JMFF025J23+ ACCTTGTTTATCAGCCCATNTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
JMFF031A04+ ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
JMFF050G08+ ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
                      ____________________________________________________________
consensus ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
 
. : . : . : . : . : . :
JMFS121B05+ TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTA
JMFF025J23+ TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTATGATATATCTATATAGAACTTC
JMFF031A04+ TCTTTT
JMFF050G08+ TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTATGATATATCTATATAGATCTTCGTTCC
                      ____________________________________________________________
consensus TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTATGATATATCTATATAGATCTTCGTTCC