| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025J23 | Sequence | 518 | 001798 (5) | ref|XP_006362574.1| | 2e-15 | PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum | 691 | 004164 (3) | ref|XP_011070823.1| | 2e-33 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
| JMFF031A04 | Sequence | 441 | 001798 (5) | ref|XP_006362574.1| | 2e-14 | PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum | 505 | 004164 (3) | ref|XP_011070823.1| | 1e-11 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
| JMFF050G08 | Sequence | 593 | 001798 (5) | ref|XP_006362574.1| | 1e-16 | PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum | 515 | 004164 (3) | ref|XP_011070823.1| | 4e-11 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
| JMFS121B05 | Sequence | 567 | 001798 (5) | ref|XP_006362574.1| | 7e-16 | PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum | |||||
| JMFS128B04 | Sequence | 610 | 001798 (5) | ref|NP_001234202.1| | 2e-27 | NRC1 [Solanum lycopersicum] gb|ABC26878.1| NRC1 [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS128B04+ CGAGTAAAAAACTCATATTGAATATCACTATCATTGAATACCATTTTAGTCAATGTG
____________________________________________________________
consensus CGAGTAAAAAACTCATATTGAATATCACTATCATTGAATACCATTTTAGTCAATGTG
. : . : . : . : . : . :
JMFS128B04+ GTTTTGCCCAACCCAGCCATTCCGACAATTGAAATGAAAGTCGTATCTTTTGATCCTTTA
____________________________________________________________
consensus GTTTTGCCCAACCCAGCCATTCCGACAATTGAAATGAAAGTCGTATCTTTTGATCCTTTA
. : . : . : . : . : . :
JMFS128B04+ GTGAGAAGTTCCTTTATAGTTTTAGCCTCACCGTCAAAACCTACCACATCATCTTCTTCC
JMFS121B05+ GTTCCTTTATAGTTTTAGCCTCACCGTCAAAACCTACCACATCATCTTCTTCC
JMFF050G08+ GTTCCTTTATAGTTNTAGCTTCACCGTCAAAACNTACCACATCATCTTCTTCC
____________________________________________________________
consensus GTGAGAAGTTCCTTTATAGTTTTAGCCTCACCGTCAAAACCTACCACATCATCTTCTTCC
. : . : . : . : . : . :
JMFS128B04+ ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
JMFS121B05+ ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
JMFF025J23+ GACTGCGGGCTGATGATTATTTAGCGAACCGGCTNGGAGTAAC
JMFF031A04+ GGAGTAAC
JMFF050G08+ ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
____________________________________________________________
consensus ACCACGGGAGCCTGGAGGACTGCGGGCTGATGATTATTTAGCGAACCGGCTTGGAGTAAC
. : . : . : . : . : . :
JMFS128B04+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
JMFS121B05+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
JMFF025J23+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCNTAATGCTTTCGATC
JMFF031A04+ TGGAGGGGGTGGGCGTAATCTNGACGGATTTTCTNGGCCCTATCCTTAATGCTTTCGATC
JMFF050G08+ TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
____________________________________________________________
consensus TGGAGGGGGTGGGCGTAATCTTGACGGATTTTCTTGGCCCTATCCTTAATGCTTTCGATC
. : . : . : . : . : . :
JMFS128B04+ TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
JMFS121B05+ TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
JMFF025J23+ TCCCTGGCAGATAGATTAACCNTGGTATAATAAGCAGCTTTTTCCGCCCAACTCTTGAGG
JMFF031A04+ TCCCNGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
JMFF050G08+ TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
____________________________________________________________
consensus TCCCTGGCAGATAGATTAACCTTGGTATAATAAGCAGCTTTTTCCGCCCATCTCTTGAGG
. : . : . : . : . : . :
JMFS128B04+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFS121B05+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFF025J23+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFF031A04+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
JMFF050G08+ GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
____________________________________________________________
consensus GTGGGTTTGGCCTTGTGGATCCTTCGCTCAACGATATATTTATCAATGGCGTCTTCAGCA
. : . : . : . : . : . :
JMFS128B04+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFS121B05+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFF025J23+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFF031A04+ TCCCTNGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
JMFF050G08+ TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
____________________________________________________________
consensus TCCCTTGCAACATTGCGAATACTCTGCTCCACTTCTACCAGCACGGCGTTGTCTCTCCAG
. : . : . : . : . : . :
JMFS128B04+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFS121B05+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFF025J23+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFF031A04+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
JMFF050G08+ TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
____________________________________________________________
consensus TTTTCTTTCTTGCCTGCTTCACCCAGATATGCCTGTAACGACCTCAGTTCTCTCACCAGA
. : . : . : . : . : . :
JMFS128B04+ TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFS121B05+ TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFF025J23+ TCATCCACCTGATCCNTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFF031A04+ TCATCCACCTGATCCNTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
JMFF050G08+ TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
____________________________________________________________
consensus TCATCCACCTGATCCTTGATCCCAAGAATCAGCAACGCGTTTTTTTCCACAGTTTGTGCT
. : . : . : . : . : . :
JMFS128B04+ ACCTTGTTTATCA
JMFS121B05+ ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
JMFF025J23+ ACCTTGTTTATCAGCCCATNTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
JMFF031A04+ ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
JMFF050G08+ ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
____________________________________________________________
consensus ACCTTGTTTATCAGCCCATCTACAATTGTGTCCATCTCTCTCTCTCTCTCCCTCTTTCTT
. : . : . : . : . : . :
JMFS121B05+ TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTA
JMFF025J23+ TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTATGATATATCTATATAGAACTTC
JMFF031A04+ TCTTTT
JMFF050G08+ TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTATGATATATCTATATAGATCTTCGTTCC
____________________________________________________________
consensus TCTTTTTGAAAGCACTCTCTCTCTCTCTCTCTATGATATATCTATATAGATCTTCGTTCC