Contig 001796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F17Sequence524001796 (4)ref|XP_006366869.1|4e-63PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'784012208 (2)ref|XP_009797723.1|1e-117PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMFF002K16Sequence561001796 (4)ref|XP_006366869.1|4e-37PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'756011213 (4)ref|XP_009797723.1|1e-27PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMFF042J23Sequence648001796 (4)ref|XP_009797723.1|2e-87PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMFF049L22Sequence646001796 (4)ref|XP_006366869.1|2e-52PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'575011213 (4)

Alignment

This contig is upended


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JMFF042J23+                                                    TCATACACGAGCTGTAAAT
                      ____________________________________________________________
consensus                                                      TCATACACGAGCTGTAAAT
 
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JMFF042J23+           GGTACCAGGCGGGATCGAAGAACAGTTCTTCATCCTCGCTCTCGCCCCGAGCATGGGAGG
                      ____________________________________________________________
consensus             GGTACCAGGCGGGATCGAAGAACAGTTCTTCATCCTCGCTCTCGCCCCGAGCATGGGAGG
 
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JMFF001F17+                                                        TACAAACTGCAGCAA
JMFF042J23+           CACACTTTGGTGGGAAATCTCTAAACAGGTTAACCGCACACATTCTACAAACTGCAGCAA
                      ____________________________________________________________
consensus             CACACTTTGGTGGGAAATCTCTAAACAGGTTAACCGCACACATTCTACAAACTGCAGCAA
 
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JMFF001F17+           TTGCTGATTCGGTGCATTTCACCGACCCCGAGGCAACAAAATCGTTGAGCTCGAGTAATA
JMFF042J23+           TTGCTGATTCGGTGCATTTCACCGACCCCGAGGCAACAAAATCGTTGAGCTCGAGTAATA
                      ____________________________________________________________
consensus             TTGCTGATTCGGTGCATTTCACCGACCCCGAGGCAACAAAATCGTTGAGCTCGAGTAATA
 
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JMFF001F17+           CCTGACGCTTCAGATCTTTCTCAGCTGCGTTCTTGTCTGGATCACCGAAATCATAAACCG
JMFF042J23+           CCTGACGCTTCAGATCTTTCTCAGCTGCGTTCTTGTCTGGATCACCGAAATCATAAACCG
JMFF002K16+                                                 GGATCACTGAAATCATACACGG
JMFF049L22+                  CTTCAGATCTTTCTCCGCTGAGTTCTTATCCGGATCACTGAAATCATACACGG
                      ____________________________________________________________
consensus             CCTGACGCTTCAGATCTTTCTCAGCTGCGTTCTTGTCTGGATCACTGAAATCATACACGG
 
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JMFF001F17+           AGCAGCAAAGGTTCAGTTTACTCACAAGCAGGCCTTGTTTCTCGCCATTCGAAACATCCT
JMFF042J23+           AGCAGCAAAGGTTCAGTTTACTCACAAGCAGGCCTTGTTTCTCGCCATTCGAAACATCCT
JMFF002K16+           AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTT
JMFF049L22+           AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTN
                      ____________________________________________________________
consensus             AGCAGCAGAGGTTCAGTTTACTCACAAGCAGGCCTTGTTTTTCGCCATTCGAAACATCTT
 
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JMFF001F17+           TAAAGCACAAATGTGGCGAAATGGATT---CCCCTCCCGCCACAATGCTGGCGGGGAAAA
JMFF042J23+           TAAAGCACAAATGTGGCGAAATGGATT---CCCCTCCCGCCACAATGCTGGCGGGGAAAA
JMFF002K16+           TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
JMFF049L22+           TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
                      ____________________________________________________________
consensus             TAAAGCACAAATGTGGTGCAATGGATTCCCCCCCTCCCGCCACAATGTTGGCTGGGAAAA
 
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JMFF001F17+           TTGCTGATGACACGCGTTTCACTACATTTAGCCGGTTCACTATGACATTGCAGCTGTTAG
JMFF042J23+           TTGCTGATGACACGCGTTTCACTACATTTAGCCGGTTCGCTATGACATTGCAGCTGTTAG
JMFF002K16+           TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
JMFF049L22+           TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
                      ____________________________________________________________
consensus             TTGCTGATGACATGCGTTTCACTACATTTAGCCGGTTCGCTATGACATTGCAGCTGTTTG
 
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JMFF001F17+           TGAACTGCATCCCATTGCCCGAGTTCGTAGG                             
JMFF042J23+           TGAACTGCATCCCATTGCCCGAGTTCGTAGG                             
JMFF002K16+           TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
JMFF049L22+           TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
                      ____________________________________________________________
consensus             TGAACTGCATCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
 
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JMFF002K16+           CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
JMFF049L22+           CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
                      ____________________________________________________________
consensus             CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
 
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JMFF002K16+           TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
JMFF049L22+           TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
                      ____________________________________________________________
consensus             TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
 
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JMFF002K16+           TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
JMFF049L22+           TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
                      ____________________________________________________________
consensus             TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
 
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JMFF002K16+           AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
JMFF049L22+           AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
                      ____________________________________________________________
consensus             AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
 
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JMFF002K16+           AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAG 
JMFF049L22+           AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAGC
                      ____________________________________________________________
consensus             AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAGC