Contig 001791:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048N22Sequence453001791 (2)408010098 (2)gb|KDP31097.1|1e-32hypothetical protein JCGZ_11473 [Jatropha curcas]
JMFS120E08Sequence622001791 (2)ref|XP_009613928.1|5e-95PREDICTED: probable importin-7 homolog [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS120E08+                                                                     AT
                      ____________________________________________________________
consensus                                                                       AT
 
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JMFS120E08+           CTCCAAATATATAGATGACCAGAATATTNTGCAGATAAGCCTGATCAGCTCTGCCACTTC
                      ____________________________________________________________
consensus             CTCCAAATATATAGATGACCAGAATATTNTGCAGATAAGCCTGATCAGCTCTGCCACTTC
 
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JMFS120E08+           AACTTTAGGATTCTCAATTTGAACAAGCCCCCTGAATATGTTCAGGAGATATGGGAAAGT
                      ____________________________________________________________
consensus             AACTTTAGGATTCTCAATTTGAACAAGCCCCCTGAATATGTTCAGGAGATATGGGAAAGT
 
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JMFS120E08+           TTCCTCAACAATGTGGTGCACAGGAGCTCTTTCTTCATCTGATTTGAACTCATATTTTCT
                      ____________________________________________________________
consensus             TTCCTCAACAATGTGGTGCACAGGAGCTCTTTCTTCATCTGATTTGAACTCATATTTTCT
 
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JMFS120E08+           TGAGAGAATCCGAAGAACAAACAAAGCTCCATAAGCTTTTTGTTCCTGCATTGCCTGCAA
                      ____________________________________________________________
consensus             TGAGAGAATCCGAAGAACAAACAAAGCTCCATAAGCTTTTTGTTCCTGCATTGCCTGCAA
 
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JMFS120E08+           ATTTTCCTTTACCCAGGGTAAAAGGCTTGGCCACTGCTCAGGGTAGTCTGCATCAATGAT
                      ____________________________________________________________
consensus             ATTTTCCTTTACCCAGGGTAAAAGGCTTGGCCACTGCTCAGGGTAGTCTGCATCAATGAT
 
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JMFS120E08+           AGTCTTCAGGCTTACCCCCAGCTGCACTCTCAACAGTGGAGGCACCTGAGCAACACAATT
                      ____________________________________________________________
consensus             AGTCTTCAGGCTTACCCCCAGCTGCACTCTCAACAGTGGAGGCACCTGAGCAACACAATT
 
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JMFS120E08+           AAGGATATTTTGCCTAACCAATTCCTTGTCACCAGGCAGAATTTTTGATTGCTCCCCTGG
                      ____________________________________________________________
consensus             AAGGATATTTTGCCTAACCAATTCCTTGTCACCAGGCAGAATTTTTGATTGCTCCCCTGG
 
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JMFS120E08+           ATTGTGAGGAGACCAATTCTTGGTAGTGAAGTTCTTAAAATTAATACTTGCTGAATGCCG
JMFF048N22+                                      GAAGTTCTTAAAATTAATACTTGCCGAATGCCG
                      ____________________________________________________________
consensus             ATTGTGAGGAGACCAATTCTTGGTAGTGAAGTTCTTAAAATTAATACTTGCTGAATGCCG
 
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JMFS120E08+           GACTTCGTTATCAGAGGACCCATCCAATATTAT                           
JMFF048N22+           GACTTCATTATGAGAGGACCCATCCAATATTATTGCTCCACATTGACAATAATAATCTTT
                      ____________________________________________________________
consensus             GACTTCGTTATGAGAGGACCCATCCAATATTATTGCTCCACATTGACAATAATAATCTTT
 
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JMFF048N22+           CAACTGTTCCGAAATGACATAGTATCTCTCCATGTCCCTTCCAACTGTATATCTTCTCTG
                      ____________________________________________________________
consensus             CAACTGTTCCGAAATGACATAGTATCTCTCCATGTCCCTTCCAACTGTATATCTTCTCTG
 
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JMFF048N22+           AGCTTTCCTCTTCTTCGGTGGAGCGGCGGTCGTGGGTGTCTGAAGCAGGGGCGGAGGCGT
                      ____________________________________________________________
consensus             AGCTTTCCTCTTCTTCGGTGGAGCGGCGGTCGTGGGTGTCTGAAGCAGGGGCGGAGGCGT
 
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JMFF048N22+           CAGCAGATCAGCGGTGAAGGCTTGTCGCGGTGTGGTGCGTCGTCGATAGGTCGCCGCTGC
                      ____________________________________________________________
consensus             CAGCAGATCAGCGGTGAAGGCTTGTCGCGGTGTGGTGCGTCGTCGATAGGTCGCCGCTGC
 
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JMFF048N22+           TGCTGTGCATTCTTGTTATCGGATTTCCCCGCCGATTGAGAGCTTGATGGAGCAATCGAA
                      ____________________________________________________________
consensus             TGCTGTGCATTCTTGTTATCGGATTTCCCCGCCGATTGAGAGCTTGATGGAGCAATCGAA
 
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JMFF048N22+           GAAGCACTGCCGGCGATTTTACGAGGAAGAAAGGGAGACGATTTGTGAGTGTTGAGGAAG
                      ____________________________________________________________
consensus             GAAGCACTGCCGGCGATTTTACGAGGAAGAAAGGGAGACGATTTGTGAGTGTTGAGGAAG
 
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JMFF048N22+           AGGAAGAAGCACGGCTGGTGTTGGCGTTAGACTAGGGTTTTAAGTCTGATGAGAACAGTG
                      ____________________________________________________________
consensus             AGGAAGAAGCACGGCTGGTGTTGGCGTTAGACTAGGGTTTTAAGTCTGATGAGAACAGTG