Contig 001787:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048B07Sequence443001787 (3)ref|XP_009790238.1|70.9PREDICTED: uncharacterized protein LOC104237732 [Nicotiana sylvestris]234017025
JMFS109F01Sequence616001787 (3)ref|XP_009790238.1|71.6PREDICTED: uncharacterized protein LOC104237732 [Nicotiana sylvestris]
JMFS125F02Sequence576001787 (3)ref|XP_009790238.1|70.9PREDICTED: uncharacterized protein LOC104237732 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS109F01+                                         GTAGTGCTTGAATCATATGGGCGAATAAAC
                      ____________________________________________________________
consensus                                           GTAGTGCTTGAATCATATGGGCGAATAAAC
 
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JMFS109F01+           TTGACTGGAGGCTGACCAGTTTCACGGTTTTCAATTGCTTCTTTTGATGCTACCTTAATG
JMFS125F02+                      CTGACCAGTTTCACGGTTTTCAATTGCTTCTTTTGATGCTACCTTAATG
                      ____________________________________________________________
consensus             TTGACTGGAGGCTGACCAGTTTCACGGTTTTCAATTGCTTCTTTTGATGCTACCTTAATG
 
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JMFS109F01+           GGTTCTTCATCGGCTCCAACTTTCCTATCGAAACCATGGTTTTCTAAGCCCAGATCAGCT
JMFS125F02+           GGTTCTTCATCGGCTCCAACTTTCCTATCGAAACCATGGTTTTCTAAGCCCAGATCAGCT
                      ____________________________________________________________
consensus             GGTTCTTCATCGGCTCCAACTTTCCTATCGAAACCATGGTTTTCTAAGCCCAGATCAGCT
 
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JMFS109F01+           TCGCCTTTTTCCAAATCCCGTTTTAGATCCTCCAATACCATTCCAATCATCTCCGCACAG
JMFS125F02+           TCGCCTTTTTCCAAATCCCGTTTTAGATCCTCCAATACCATTCCAATCATCTCCGCACAG
JMFF048B07+                                                CCATTCCAATCATCTCCGCACAG
                      ____________________________________________________________
consensus             TCGCCTTTTTCCAAATCCCGTTTTAGATCCTCCAATACCATTCCAATCATCTCCGCACAG
 
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JMFS109F01+           CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
JMFS125F02+           CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
JMFF048B07+           CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
                      ____________________________________________________________
consensus             CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
 
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JMFS109F01+           TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
JMFS125F02+           TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
JMFF048B07+           TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
                      ____________________________________________________________
consensus             TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
 
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JMFS109F01+           TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
JMFS125F02+           TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
JMFF048B07+           TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
                      ____________________________________________________________
consensus             TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
 
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JMFS109F01+           GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
JMFS125F02+           GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
JMFF048B07+           GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
                      ____________________________________________________________
consensus             GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
 
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JMFS109F01+           ACCCGACCCGAACGATTTTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
JMFS125F02+           ACCCGACCCGAACGATTTTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
JMFF048B07+           ACCCGACCCGAACGATTCTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
                      ____________________________________________________________
consensus             ACCCGACCCGAACGATTTTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
 
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JMFS109F01+           TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTC
JMFS125F02+           TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTT
JMFF048B07+           TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTC
                      ____________________________________________________________
consensus             TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTC
 
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JMFS109F01+           GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGA              
JMFS125F02+           GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGA              
JMFF048B07+           GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGAGGGAAATGCATTGT
                      ____________________________________________________________
consensus             GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGAGGGAAATGCATTGT