Contig 001787:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048B07Sequence443001787 (3)ref|XP_009790238.1|70.9PREDICTED: uncharacterized protein LOC104237732 [Nicotiana sylvestris]234017025
JMFS109F01Sequence616001787 (3)ref|XP_009790238.1|71.6PREDICTED: uncharacterized protein LOC104237732 [Nicotiana sylvestris]
JMFS125F02Sequence576001787 (3)ref|XP_009790238.1|70.9PREDICTED: uncharacterized protein LOC104237732 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS109F01+ GTAGTGCTTGAATCATATGGGCGAATAAAC
                      ____________________________________________________________
consensus GTAGTGCTTGAATCATATGGGCGAATAAAC
 
. : . : . : . : . : . :
JMFS109F01+ TTGACTGGAGGCTGACCAGTTTCACGGTTTTCAATTGCTTCTTTTGATGCTACCTTAATG
JMFS125F02+ CTGACCAGTTTCACGGTTTTCAATTGCTTCTTTTGATGCTACCTTAATG
                      ____________________________________________________________
consensus TTGACTGGAGGCTGACCAGTTTCACGGTTTTCAATTGCTTCTTTTGATGCTACCTTAATG
 
. : . : . : . : . : . :
JMFS109F01+ GGTTCTTCATCGGCTCCAACTTTCCTATCGAAACCATGGTTTTCTAAGCCCAGATCAGCT
JMFS125F02+ GGTTCTTCATCGGCTCCAACTTTCCTATCGAAACCATGGTTTTCTAAGCCCAGATCAGCT
                      ____________________________________________________________
consensus GGTTCTTCATCGGCTCCAACTTTCCTATCGAAACCATGGTTTTCTAAGCCCAGATCAGCT
 
. : . : . : . : . : . :
JMFS109F01+ TCGCCTTTTTCCAAATCCCGTTTTAGATCCTCCAATACCATTCCAATCATCTCCGCACAG
JMFS125F02+ TCGCCTTTTTCCAAATCCCGTTTTAGATCCTCCAATACCATTCCAATCATCTCCGCACAG
JMFF048B07+ CCATTCCAATCATCTCCGCACAG
                      ____________________________________________________________
consensus TCGCCTTTTTCCAAATCCCGTTTTAGATCCTCCAATACCATTCCAATCATCTCCGCACAG
 
. : . : . : . : . : . :
JMFS109F01+ CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
JMFS125F02+ CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
JMFF048B07+ CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
                      ____________________________________________________________
consensus CCATTTCCAGAAGAATCGACACTCGCGCTTTTCAAACCCAGCTCCGAACTTTCGCCATTT
 
. : . : . : . : . : . :
JMFS109F01+ TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
JMFS125F02+ TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
JMFF048B07+ TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
                      ____________________________________________________________
consensus TGTTCAATTACAGAGCTCGTAGAGAAAACCCTCCGGACTCGGAGGTTGCGTGAGCCGTCG
 
. : . : . : . : . : . :
JMFS109F01+ TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
JMFS125F02+ TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
JMFF048B07+ TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
                      ____________________________________________________________
consensus TTGACATCCAAAAGAGCTTCTTCAGGCTGCTGCAAATAAGAGTTTTTGCGCTTCTTGGGA
 
. : . : . : . : . : . :
JMFS109F01+ GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
JMFS125F02+ GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
JMFF048B07+ GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
                      ____________________________________________________________
consensus GTTGGATAGAGCTTTTGGAAATTTTGGTAGCTGGGACTGGATCTAGTGGTGTCTAATCTG
 
. : . : . : . : . : . :
JMFS109F01+ ACCCGACCCGAACGATTTTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
JMFS125F02+ ACCCGACCCGAACGATTTTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
JMFF048B07+ ACCCGACCCGAACGATTCTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
                      ____________________________________________________________
consensus ACCCGACCCGAACGATTTTGATGGGAATAGGTCTGGGACTTGCTGCGAGTGAACATGCCT
 
. : . : . : . : . : . :
JMFS109F01+ TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTC
JMFS125F02+ TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTT
JMFF048B07+ TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTC
                      ____________________________________________________________
consensus TCCTTTAATGGCTGTGGTTTGCTGCTCTTGAGGTCTTGCCTTTCCATGAATGGCTTTCTC
 
. : . : . : . : . : . :
JMFS109F01+ GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGA
JMFS125F02+ GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGA
JMFF048B07+ GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGAGGGAAATGCATTGT
                      ____________________________________________________________
consensus GATCGTTCCCAAGCTTGGAGATTAGGGTTTGAAGAACGAGAATGGAGGGAAATGCATTGT