Contig 001784:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047M21Sequence477001784 (3)ref|XP_006366209.1|2e-86PREDICTED: coiled-coil domain-containing protein 25-like [Solanum tuberosum]414017024
JMFN031K01Sequence613001784 (3)ref|XP_006366209.1|5e-104PREDICTED: coiled-coil domain-containing protein 25-like [Solanum tuberosum]
JMFN036D01Sequence603001784 (3)ref|XP_006366209.1|2e-102PREDICTED: coiled-coil domain-containing protein 25-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFN036D01+                                             AAGTTTTTGTAGCTCCTCAACTCAGT
JMFN031K01+                                         CATCAAGTTTTTGTAGCTCCTCAACTCAGT
                      ____________________________________________________________
consensus                                           CATCAAGTTTTTGTAGCTCCTCAACTCAGT
 
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JMFN036D01+           TTGTCTCTCCTTTTCAAGCCGTTCCATCTCTTCACGCCGTTTTTTCTCCCTCAGCTGCTG
JMFN031K01+           TTGTCTCTCCTTTTCAAGCCGTTCCATCTCTTCACGCCGTTTTTTCTCCCTCAGCTGCTG
                      ____________________________________________________________
consensus             TTGTCTCTCCTTTTCAAGCCGTTCCATCTCTTCACGCCGTTTTTTCTCCCTCAGCTGCTG
 
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JMFN036D01+           TTTCCTCTCTGCCTTTTCAGCAGCACTGACTGCCTCTCGCTCAGCCTTCAAGTCAGGCTT
JMFN031K01+           TTTCCTCTCTGCCTTTTCAGCAGCACTGACTGCCTCTCGCTCAGCCTTCAAGTCAGGCTT
                      ____________________________________________________________
consensus             TTTCCTCTCTGCCTTTTCAGCAGCACTGACTGCCTCTCGCTCAGCCTTCAAGTCAGGCTT
 
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JMFN036D01+           TCTTTCAACCTTTGTTCGGTTCAATCTATTTACTATCTCATTTATTCTCTTCTCCACTCT
JMFN031K01+           TCTTTCAACCTTTGTTCGGTTCAATCTATTTACTATCTCATTTATTCTCTTCTCCACTCT
JMFF047M21+                                                     TATTCTCTTCTCCACTCT
                      ____________________________________________________________
consensus             TCTTTCAACCTTTGTTCGGTTCAATCTATTTACTATCTCATTTATTCTCTTCTCCACTCT
 
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JMFN036D01+           AACAGTGCGCACCATTTTTGGGTTGTGAAAGCTAACTTGGCCAACTTCCATGGAAGCAGT
JMFN031K01+           AACAGTGCGCACCATTTTTGGGTTGTGAAAGCTAACTTGGCCAACTTCCATGGAAGCAGT
JMFF047M21+           AACAGTGCGCACCATTTTTGGGTTGTGAAAGCTAACTTGGCCAACTTCCATGGAAGCAGT
                      ____________________________________________________________
consensus             AACAGTGCGCACCATTTTTGGGTTGTGAAAGCTAACTTGGCCAACTTCCATGGAAGCAGT
 
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JMFN036D01+           CTTTCTAAGGTTTTGCCAAGGAGTGTACACAACATCAATATTATTCAACTTGTTTCCTTG
JMFN031K01+           CTTTCTAAGGTTTTGCCAAGGAGTGTACACAACATCAATATTATTCAACTTGTTTCCTTG
JMFF047M21+           CTTTCTAAGGTTTTGCCAAGGAGTGTACACAACATCAATATTATTCAACTTGTTTCCTTG
                      ____________________________________________________________
consensus             CTTTCTAAGGTTTTGCCAAGGAGTGTACACAACATCAATATTATTCAACTTGTTTCCTTG
 
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JMFN036D01+           GATGGAATTAGCCTTCACCAGTTGTACACAATCTTCGAGTACACCCTCAGGTATATCATC
JMFN031K01+           GATGGAATTAGCCTTCACCAGTTGTACACAATCTTCGAGTACACCCTCAGGTATATCATC
JMFF047M21+           GATGGAATTAGCCTTCACCAGTTGTACACAATCTTCGAGTACACCCGCAGGTATATCATC
                      ____________________________________________________________
consensus             GATGGAATTAGCCTTCACCAGTTGTACACAATCTTCGAGTACACCCTCAGGTATATCATC
 
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JMFN036D01+           CATTGTCTGAAACTTTGGCAATCTCAAATAAACGTGAGCAGAAGACATTTTGTCAACATG
JMFN031K01+           CATTGTCTGAAACTTTGGCAATCTCAAATAAACGTGAGCAGAAGACATTTTGTCAACATG
JMFF047M21+           CATTGTCTGAAACTTTGGCAATCTCAAATAAACGTGAGCAGAAGACATTTTGTCAACATG
                      ____________________________________________________________
consensus             CATTGTCTGAAACTTTGGCAATCTCAAATAAACGTGAGCAGAAGACATTTTGTCAACATG
 
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JMFN036D01+           GAACCAGATGTCTTCAGGGAAGCCGTATTTGATGAGATCTTCGTTCTCGTATTTGTCAAG
JMFN031K01+           GAACCAGATGTCTTCAGGGAAGCCGTATTTGATGAGATCTTCGTTCTCGTATTTGTCAAG
JMFF047M21+           GAACCAGATGTCTTCAGGGAAGCCGTATTTGATGAGATCTTCGTTCTCGTATTTGTCAAG
                      ____________________________________________________________
consensus             GAACCAGATGTCTTCAGGGAAGCCGTATTTGATGAGATCTTCGTTCTCGTATTTGTCAAG
 
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JMFN036D01+           GCCCATGAAGATGGTATAGTCTCCCGCTTCGGGACGGGCCTTGAAGTAGAACACCATCTT
JMFN031K01+           GCCCATGAAGATGGTATAGTCTCCCGCTTCGGGACGGGCCTTGAAGTAGAACACCATCTT
JMFF047M21+           GCCCATGAAGATGGTATAGTCTCCCGCTTCGGGACGGGCCTTGAAGTAGAACACCATCTT
                      ____________________________________________________________
consensus             GCCCATGAAGATGGTATAGTCTCCCGCTTCGGGACGGGCCTTGAAGTAGAACACCATCTT
 
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JMFN036D01+           CGTCTTCTTCCCTTTTCCGACGAATGTCTAGGGTTTC                       
JMFN031K01+           CGTCTTCTTCCCTTTTCCGACGAATGTCTAGGGTTTC                       
JMFF047M21+           CGTCTTCTTCCCTTTTCCGACGAATGTCTAGGGTTTCTTTCTCTCTCTTCTCTTTATTAT
                      ____________________________________________________________
consensus             CGTCTTCTTCCCTTTTCCGACGAATGTCTAGGGTTTCTTTCTCTCTCTTCTCTTTATTAT