clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005M02 | Sequence | 405 | 001775 (5) | ref|XP_010056913.1| | 1e-30 | PREDICTED: probable inositol transporter 2 isoform X1 [Eucalyptus grandis] ref| | 722 | 019058 | ref|XP_010324908.1| | 9e-104 | PREDICTED: probable inositol transporter 2 isoform X4 [Solanum lycopersicum] re |
JMFF017P24 | Sequence | 580 | 001775 (5) | gb|KDP38001.1| | 6e-56 | hypothetical protein JCGZ_04644 [Jatropha curcas] | 743 | 009808 (5) | ref|XP_010324908.1| | 4e-98 | PREDICTED: probable inositol transporter 2 isoform X4 [Solanum lycopersicum] re |
JMFF045P15 | Sequence | 646 | 001775 (5) | gb|KDP38001.1| | 1e-70 | hypothetical protein JCGZ_04644 [Jatropha curcas] | 633 | 009808 (5) | ref|XP_011096603.1| | 3e-74 | PREDICTED: probable inositol transporter 2 isoform X2 [Sesamum indicum] |
JMSF021E20 | Sequence | 647 | 001775 (5) | ref|XP_010247407.1| | 3e-72 | PREDICTED: probable inositol transporter 2 [Nelumbo nucifera] | 783 | 009808 (5) | ref|XP_007025026.1| | 2e-110 | Inositol transporter 2 isoform 1 [Theobroma cacao] gb|EOY27648.1| Inositol trans |
JMSF038E02 | Sequence | 652 | 001775 (5) | gb|KDP38001.1| | 3e-71 | hypothetical protein JCGZ_04644 [Jatropha curcas] | 937 | 009808 (5) | ref|XP_010324908.1| | 2e-113 | PREDICTED: probable inositol transporter 2 isoform X4 [Solanum lycopersicum] re |
This contig is upended
. : . : . : . : . : . :
JMSF021E20+ TTC
JMSF038E02+ TTC
____________________________________________________________
consensus TTC
. : . : . : . : . : . :
JMSF021E20+ GCCGGAGATGCCTCGGAAATGTATAACGGAGAAGTCATCGACGCCATTCCCACGCCAAGA
JMSF038E02+ GCCGGAGATGCNTCGGAAATGTATAACGGAGAAGTCATCGACGCCATTCCCACGCCAAGA
JMFF045P15+ GGAAATGTATAACGGAGAAGTCATCGACGCCATTCCCACGCCAAGA
____________________________________________________________
consensus GCCGGAGATGCCTCGGAAATGTATAACGGAGAAGTCATCGACGCCATTCCCACGCCAAGA
. : . : . : . : . : . :
JMSF021E20+ CCCACAAAAATTCTGCCCACAATCAGAAGGGCAGGGCTCGGGGCAGCAGCCATGATAATG
JMFF017P24+ ATTCTGCCCACAATCAGAAGGGCAGGGCTCGGGGCAGCAGCCATGATAATG
JMSF038E02+ CCCACAAAAATTCTGCCCACAATCAGAAGGGCAGGGCTCGGGGCAGCAGCCATGATAATG
JMFF045P15+ CCCACAAAAATTCTGCCCACAATCAGAAGGGCAGGGCTCGGGGCAGCAGCCATGATAATG
____________________________________________________________
consensus CCCACAAAAATTCTGCCCACAATCAGAAGGGCAGGGCTCGGGGCAGCAGCCATGATAATG
. : . : . : . : . : . :
JMSF021E20+ GCTCCTACAAGAAACAGGAAATCAGCGCATAGTATGGCTGTTCTTCTCCCATATTTGTCA
JMFF017P24+ GCTCCTACAAGAAACAGGAAATCAGCGCATAGTATGGCTGTTCTTCTCCCATATTTGTCA
JMSF038E02+ GCTCCTACAAGAAACAGGAAATCAGCGCATAGTATGGCTGTTCTTCTCCCATATTTGTCA
JMFF045P15+ GCTCCTACAAGAAACAGGAAATCAGCGCATAGTATGGCTGTTCTTCTCCCATATTTGTCA
____________________________________________________________
consensus GCTCCTACAAGAAACAGGAAATCAGCGCATAGTATGGCTGTTCTTCTCCCATATTTGTCA
. : . : . : . : . : . :
JMFF005M02+ CCTATGATTGCTCCGGCCACTGCTGTGCTCACTATA
JMSF021E20+ TTTAACCATCCACCAATCGCCGCCCCTACGATTGCTCCAGCCACTGCCGTACTCACTATA
JMFF017P24+ TTTAACCATCCACCAATCGCCGCCCCTACGATTGCTCCAGCCACTGCCGTACTCACTATA
JMSF038E02+ TTTAACCATCCACCAATCGCCGCCCCTACGATTGCTCCAGCCACTGCCGTACTCACTATA
JMFF045P15+ TTTAACCATCCACCAATCGCCGCCCCTACGATTGCTCCAGCCACTGCCGTACTCAATATA
____________________________________________________________
consensus TTTAACCATCCACCAATCGCCGCCCCTACGATTGCTCCAGCCACTGCCGTACTCACTATA
. : . : . : . : . : . :
JMFF005M02+ GCCTCCTGCAAAACTGTTTTCCTGTCAACAGCCTTGAAGTCATCTTTAATGTAAAGAAGA
JMSF021E20+ GCTTCCTGCAAGACAGTTCGTCTGTCAACAGACTTGAAGTCATCTCTGATGTAAAGAAGA
JMFF017P24+ GCTTCCTGCAAGACAGTTCGTCTGTCAACAGACTTGAAGTCATCTCTGATGTAAAGAAGA
JMSF038E02+ GCTTCCTGCAAGACAGTTCGTCTGTCAACAGACTTGAAGTCATCTCTGATGTAAAGAAGA
JMFF045P15+ GCTTCCTGCAAGACAGTTCGTCTGTCAACAGACTTGAAGTCATCTCTGATGTAAAGAAGA
____________________________________________________________
consensus GCTTCCTGCAAGACAGTTCGTCTGTCAACAGACTTGAAGTCATCTCTGATGTAAAGAAGA
. : . : . : . : . : . :
JMFF005M02+ GCCCCCGATATCACTCCAGTATCATAGCCAAAGAGAAGACCNCCGATTCCGGCAGAGAAA
JMSF021E20+ GCTCCAGATATCACTCCAGTATCATAGCCAAAGAGAAGTCCACCAATTCCAGCAGAGAAA
JMFF017P24+ GCTCCAGATATCACTCCAGTATCATAGCCAAAGAGAAGTCCACCAATTCCAGCAGAGAAA
JMSF038E02+ GCTCCAGATATCACTCCAGTATCATAGCCAAAGAGAAGTCCACCAATTCCAGCAGAGAAA
JMFF045P15+ GCTCCAGATATCACTCCAGTATCATAGCCAAAGAGAAGTCCACCAATTCCAGCAGAGAAA
____________________________________________________________
consensus GCTCCAGATATCACTCCAGTATCATAGCCAAAGAGAAGTCCACCAATTCCAGCAGAGAAA
. : . : . : . : . : . :
JMFF005M02+ GCAAGGCGAAGAACATAAGGGTTNTTCCATGCCAAAGCTAAACACTNTNTGAAAGCTGTT
JMSF021E20+ GCAAGGCGAAGAACATAAGGGTTCTTCCAAGACAGAGCCAAACACTCCCTGAAAGCTGTT
JMFF017P24+ GCAAGGCGAAGAACATAAGGGTTCTTCCAAGACAGAGCCAAACACTCCCTGAAAGCTGTT
JMSF038E02+ GCAAGGCGAAGAACATAAGGGTTCTTCCAAGACAGAGCCAAACACTCCCTGAAAGCTGTT
JMFF045P15+ GCAAGGCGAAGAACATAAGGGTTCTTCCAAGACAGAGCCAAACACTCCCTGAAAGCTGTT
____________________________________________________________
consensus GCAAGGCGAAGAACATAAGGGTTCTTCCAAGACAGAGCCAAACACTCCCTGAAAGCTGTT
. : . : . : . : . : . :
JMFF005M02+ GCATCTGTTCCTG
JMSF021E20+ GCATCTGTGCCTGGATGCACCCCTCCTTCCATTTTATTTCTTTATTCTTTATTAGATCAA
JMFF017P24+ GCATCTGTGCCTGGATGCACCCCTCCTTCCATTTTATTTCTTTATTCTTTATTAGATCAA
JMSF038E02+ GCATCTGTGCCTGGATGCACCCCTCCTTCCATTTTATTTCTTTATTCTTTATTAGATCAA
JMFF045P15+ GCATCTGTGCCTGGATGCACCCCTCCTTCCATTTTATTTCTTTATTCTTTATTAGATCAA
____________________________________________________________
consensus GCATCTGTGCCTGGATGCACCCCTCCTTCCATTTTATTTCTTTATTCTTTATTAGATCAA
. : . : . : . : . : . :
JMSF021E20+ CACATACTATACAGGGAGGATTATTTAAAAAGAGTATTATTACTTCTTAATTTCAGAATC
JMFF017P24+ CACATACTATACAGGGAGGATTATTTAAAAAGAGTATTATTACTTCTTAATTTCAGAATC
JMSF038E02+ CACATACTATACAGGGAGGATTATTTAAAAAGAGTATTATTACTTCTTAATTTCAGAGTC
JMFF045P15+ CACATACTATACAGGGAGGATTATTTAAAAAGAGTATTATTACTTCTTAATTTCAGAATC
____________________________________________________________
consensus CACATACTATACAGGGAGGATTATTTAAAAAGAGTATTATTACTTCTTAATTTCAGAATC
. : . : . : . : . : . :
JMSF021E20+ TGCAGAAACCAAAAAAGGAAACTTATGAGAGCTGCAGAGATAGGAAAAATGGTGGAGAAG
JMFF017P24+ TGCAGAAACCAAAAAAGGAAACTTATGAGAGCTGCAGAGATAGGAAAAATGGTGGAGAAG
JMSF038E02+ TGCAGAAACC-AAAAAGGAAACTTATGAGAGCTGCAGAGATAGGAAAAATGGTGGAGAAG
JMFF045P15+ TGCAGAAACCAAAAAAGGAAACTTATGAGAGCTGCAGAGATAGGAAAAATGGTGGAGAAG
____________________________________________________________
consensus TGCAGAAACCAAAAAAGGAAACTTATGAGAGCTGCAGAGATAGGAAAAATGGTGGAGAAG
. : . : . : . : . : . :
JMSF021E20+ AAATGAAAGGACAGAATGGGAAGAAGGTGAGGAAAAAGAGTCT
JMFF017P24+ AAATGAAAGGACAGAATGGGAAGAAGGTGAGGAAAAAGAGTCT
JMSF038E02+ AAATGAAAGGACAGAATGGGAAGAAGGTGAGGAAAAAGAGTCT
JMFF045P15+ AAATGAAAGGACAGAATGGGAAGAAGGTGAGGAAAAAGAGTCTAGGAGCGACTGTATAGT
____________________________________________________________
consensus AAATGAAAGGACAGAATGGGAAGAAGGTGAGGAAAAAGAGTCTAGGAGCGACTGTATAGT