Contig 001773:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+              GATGAAGCACTCGGGGGTGCATCACAAGAAGATGAAGTGGACATAAAAACACTTTTC
                      ____________________________________________________________
consensus                GATGAAGCACTCGGGGGTGCATCACAAGAAGATGAAGTGGACATAAAAACACTTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           AATTGGACTGCACTATAACCAACTGTGTCTTGACAACCAGAAGAAATGGCTCTCAAGGAT
                      ____________________________________________________________
consensus             AATTGGACTGCACTATAACCAACTGTGTCTTGACAACCAGAAGAAATGGCTCTCAAGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           GCAGGTTGAGAATTTTGTGCTTGAATATATGAAGATGGAGAAGTCACAACTGGGATAGAT
                      ____________________________________________________________
consensus             GCAGGTTGAGAATTTTGTGCTTGAATATATGAAGATGGAGAAGTCACAACTGGGATAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           GGGCCAGTAGCTCTTGTGGCCTGTGGATGTGACCCGGATGGAAAGGTTGTTCCATCTGCA
                      ____________________________________________________________
consensus             GGGCCAGTAGCTCTTGTGGCCTGTGGATGTGACCCGGATGGAAAGGTTGTTCCATCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           AGAACAACAAAACCTGCTTCCCTTGCCACAGCGGAAATGACCTCATTGATATCGGCCCTG
                      ____________________________________________________________
consensus             AGAACAACAAAACCTGCTTCCCTTGCCACAGCGGAAATGACCTCATTGATATCGGCCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           GCTCTAAGATTATAGTTACCATACTTTCGAAGGCCAGCCAAGATCTTTGCGGTAATTGCC
                      ____________________________________________________________
consensus             GCTCTAAGATTATAGTTACCATACTTTCGAAGGCCAGCCAAGATCTTTGCGGTAATTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           CTTCGATGTCTCTCCCTTAGCTTTGTTCTTTCCTTCTCTTCTAATGGCCTAGACCTACGA
JMSF026M20+                                              CTCTTCTAATGGCCTAGACCTACGA
                      ____________________________________________________________
consensus             CTTCGATGTCTCTCCCTTAGCTTTGTTCTTTCCTTCTCTTCTAATGGCCTAGACCTACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           GGTCCTCCTTGTGGGATTGGCTGCTCCTGAAATTGCTGATGATGCAAGAACCTATGGCTG
JMSF026M20+           GGTCCTCCTTGTGGGATTGGCTGCTCCTGAAATTGCTGATGATGCAAGAACCTATGGCTG
JMFF045L22+                                     CTGAAATTGCTGATGATGCAAGAACCTATGGCTG
                      ____________________________________________________________
consensus             GGTCCTCCTTGTGGGATTGGCTGCTCCTGAAATTGCTGATGATGCAAGAACCTATGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           CTGTTGTTAGATGCAACCCCCCCATCAATGCCTACAGTTGCTGGAGCAGATAAGCTCTTT
JMSF026M20+           CTGTTGTTAGATGCAACCCCCCCATCAATGCCTACAGTTGCTGGAGCAGATAAGCTCTTT
JMFF045L22+           CTGTTG-TAGATGCAACCCCCCCATCAATGCCTACAGTTGCTGGAGCAGATAAGCTCTTT
                      ____________________________________________________________
consensus             CTGTTGTTAGATGCAACCCCCCCATCAATGCCTACAGTTGCTGGAGCAGATAAGCTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           TCTTCCTCTTCTTCTTCTTCATCCTCATCATCTTCCTCTTTCACATCCATCCCCATTTCT
JMSF026M20+           TCTTCCTCTTCTTCTTCTTCATCCTCATCATCTTCCTCTTTCACATCCATCCCCATTTCT
JMFF045L22+           TCTTCCTCTTCTTCTTCTTCATCCTCATCATCTTCCTCTTTCACATCCATCCCCATTTCT
                      ____________________________________________________________
consensus             TCTTCCTCTTCTTCTTCTTCATCCTCATCATCTTCCTCTTTCACATCCATCCCCATTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS115H05+           TCATCTTCTTCATTGGTGATATATC                                   
JMSF026M20+           TCATCTTCTTCATTGGTGATATATCTATGCATCTCTGCAGCCATATTCTCCCTCCAGTTA
JMFF045L22+           TCATCTTCTTCATTGGTGATATATCTATGCATCTCTGCAGCCATATTCTCCCTCCAGTTA
                      ____________________________________________________________
consensus             TCATCTTCTTCATTGGTGATATATCTATGCATCTCTGCAGCCATATTCTCCCTCCAGTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M20+           TGTCTCCCTCCCTCCCCAAAGAGTCACATGCACATGTCAATATAATCTTGATAAACTATT
JMFF045L22+           TGTCTCCCTCCCTCCCCAAAGAGTCACATGCACATGTCAATATAATCTTGATAAACTATT
                      ____________________________________________________________
consensus             TGTCTCCCTCCCTCCCCAAAGAGTCACATGCACATGTCAATATAATCTTGATAAACTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M20+           TAAGTCACGCTCAAATCTCCCAGCATCATGCATAGTTGGCAAATCTCGAGACAGACTCCA
JMFF045L22+           TAAGTCACGCTCAAATCTCCCAGCATCATGCATAGTTGGCAAATCTCGAGACAGACTCCA
                      ____________________________________________________________
consensus             TAAGTCACGCTCAAATCTCCCAGCATCATGCATAGTTGGCAAATCTCGAGACAGACTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M20+           GATACATGGCT                                                 
JMFF045L22+           GATACATGGCTTAGCATGCATAGATTGAAATCGTTCACGGCGTCTCAATTCAACAAGCCA
                      ____________________________________________________________
consensus             GATACATGGCTTAGCATGCATAGATTGAAATCGTTCACGGCGTCTCAATTCAACAAGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005N11+                                                    CTGGAAAGAGAAGAAGAAA
JMFF045L22+           GATCCAAAGGGTAGTGAAGGGGAAATATTCCGGCAATTGACCTGGAAAGAGAAGAAGAAA
                      ____________________________________________________________
consensus             GATCCAAAGGGTAGTGAAGGGGAAATATTCCGGCAATTGACCTGGAAAGAGAAGAAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005N11+           AAGCACCGGCAGAGCTCCGTCAAGAGCAAGTGAAAGGGGCGGGTTCTTTTGCAGGTCCTT
JMFF045L22+           AAGCACCGGCAGAGCTCCGTCAAGAGCAAGTGAAAGGGGCGGGTTCTTTTGCAGGTCCTT
                      ____________________________________________________________
consensus             AAGCACCGGCAGAGCTCCGTCAAGAGCAAGTGAAAGGGGCGGGTTCTTTTGCAGGTCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005N11+           GGAGGTTTCCGGCGAAGACCGGCGGTGCAGCGGCGGTGCACGGCGAGGATGTGGAAGGGA
JMFF045L22+           GGAGGTTTCCGGCGAAGATCGGCGGTGCAGCGGCGGTGCACGGCGAGGATGTGGAAGGGA
                      ____________________________________________________________
consensus             GGAGGTTTCCGGCGAAGATCGGCGGTGCAGCGGCGGTGCACGGCGAGGATGTGGAAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005N11+           TATGGTTTTCACTTTTCACGCGTGTGGGAGAACTCAAGCGTGCGTAGAT           
JMFF045L22+           TATGGTTTTCACTTTTCACGCGTGTGGGAGAACTCAAGCGTGCGTAGATATGCCTGGCAC
                      ____________________________________________________________
consensus             TATGGTTTTCACTTTTCACGCGTGTGGGAGAACTCAAGCGTGCGTAGATATGCCTGGCAC