Contig 001770:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A20Sequence498001770 (8)ref|XP_010524830.1|1e-52PREDICTED: shaggy-related protein kinase alpha-like [Tarenaya hassleriana]
JMFF012B04Sequence533001770 (8)ref|XP_010524830.1|1e-58PREDICTED: shaggy-related protein kinase alpha-like [Tarenaya hassleriana]822008345 (7)ref|XP_011092192.1|1e-143PREDICTED: shaggy-related protein kinase alpha [Sesamum indicum]
JMFF045F19Sequence642001770 (8)gb|KDO45354.1|2e-83hypothetical protein CISIN_1g015298mg [Citrus sinensis]609008345 (7)gb|AAW80932.1|1e-27putative protein kinase, partial [Astragalus membranaceus]
JMFF046B12Sequence453001770 (8)gb|KDO45354.1|1e-41hypothetical protein CISIN_1g015298mg [Citrus sinensis]301008345 (7)ref|XP_011092192.1|1e-21PREDICTED: shaggy-related protein kinase alpha [Sesamum indicum]
JMFS065D10Sequence616001770 (8)gb|KDO45354.1|4e-87hypothetical protein CISIN_1g015298mg [Citrus sinensis]
JMSF006J23Sequence268001770 (8)277008345 (7)gb|KGN65982.1|4e-25hypothetical protein Csa_1G560660 [Cucumis sativus]
JMSF021P21Sequence680001770 (8)gb|KDO45354.1|2e-99hypothetical protein CISIN_1g015298mg [Citrus sinensis]765008345 (7)gb|AAW80932.1|4e-83putative protein kinase, partial [Astragalus membranaceus]
JMSF027M15Sequence654001770 (8)gb|KDO45354.1|5e-102hypothetical protein CISIN_1g015298mg [Citrus sinensis]725008345 (7)ref|XP_006598764.1|9e-91PREDICTED: uncharacterized protein LOC100820098 isoform X1 [Glycine max]

Alignment

This contig is upended


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JMSF027M15+                                   GGTGAACAGTTTCCGGAACATACTCGAGAACCAGAT
JMSF021P21+                                                             AGAACCAGAT
                      ____________________________________________________________
consensus                                     GGTGAACAGTTTCCGGAACATACTCGAGAACCAGAT
 
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JMSF027M15+           TAAGATATAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAAGGATACAACAT
JMFS065D10+                                CAGTTGTAGAAAAGAAGCAGTGCTTCAAGGATACAACAT
JMSF021P21+           TAAGATATAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAAGGATACAACAT
JMFF045F19+                             TATCAGTNGTAGAAAAGAAGCAGTGCTTCAAGGATACAACAT
                      ____________________________________________________________
consensus             TAAGATATAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAAGGATACAACAT
 
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JMSF027M15+           TTGGGTGGTCAAGAAGGCGCATAGTTTGTAATTCTCTATTCTTATATCTTTTGTCCTGAA
JMFS065D10+           TTGGGTGGTCAAGAAGGCGCATAGTTTGTAATTCTCTATTCTTATATCTTTTGTCCTGAA
JMSF021P21+           TTGGGTGGTCAAGAAGGCGCATAGTTTGTAATTCTCTATTCTTATATCTTTTGTCCTGAA
JMFF045F19+           TGGGTGGTCAAAGAAGGCGCATAGTTNGTAATTCTCTATTCTTATATCTTTTGTCCTGAA
                      ____________________________________________________________
consensus             TTGGGTGGTCAAGAAGGCGCATAGTTTGTAATTCTCTATTCTTATATCTTTTGTCCTGAA
 
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JMSF027M15+           GAACCTTTTTTATAGCAACAGTTTCACCAGTCTCTAAGCATTTTGCCTGAAACACTACTC
JMFS065D10+           GAACCTTTTTTATAGCAACAGTTTCACCAGTCTCTAAGCATTTTGCCTGAAACACTACTC
JMSF021P21+           GAACCTTTTTTATAGCAACAGTTTCACCAGTCTCTAAGCATTTTGCCTGAAACACTACTC
JMFF012B04+             ACCTTTTTTATAGCAACAGTTTCACCAGTCTNTAAGCATTTTGCCTGAAACACTACTC
JMFF007A20+                                             TAAGCATTTTGCCTGAAACACTACTC
JMFF045F19+           GAACCTTTTTTATAGCAACAGTTTCACCAGTCTCTAAGCATTTTGCCTGAAACACTACTC
                      ____________________________________________________________
consensus             GAACCTTTTTTATAGCAACAGTTTCACCAGTCTCTAAGCATTTTGCCTGAAACACTACTC
 
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JMSF027M15+           CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
JMFS065D10+           CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
JMSF021P21+           CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
JMFF012B04+           CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
JMFF007A20+           CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
JMFF046B12+                              AATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
JMFF045F19+           CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
                      ____________________________________________________________
consensus             CAAAGGATCCATGCCCAACAATACGTTCAGCCATATAGCTTATAGTCTGTTTTGGCTGAC
 
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JMSF027M15+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
JMFS065D10+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
JMSF021P21+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
JMFF012B04+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
JMFF007A20+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
JMFF046B12+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
JMFF045F19+           CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
                      ____________________________________________________________
consensus             CATTTCGACCACCAATAGTTGTCACTATTATATGACCTGTCTCAGTACCATTTCCATCAA
 
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JMSF027M15+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
JMFS065D10+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
JMSF021P21+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
JMFF012B04+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
JMFF007A20+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
JMFF046B12+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
JMFF045F19+           CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
                      ____________________________________________________________
consensus             CAACAGTTGCTTCCATATCCTTATCATCTCTGATTTTCATGTCATTCATCTCCTCAGGCA
 
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JMSF027M15+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMFS065D10+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMSF021P21+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMFF012B04+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMFF007A20+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMFF046B12+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMSF006J23+                                    ACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
JMFF045F19+           ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
                      ____________________________________________________________
consensus             ACCTATCAACACCAACGGTGTGCCCACTGGATTCTCTTGCACCAGTAGTAGGTGCTAAAC
 
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JMSF027M15+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMFS065D10+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMSF021P21+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMFF012B04+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMFF007A20+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMFF046B12+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMSF006J23+           NTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
JMFF045F19+           CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
                      ____________________________________________________________
consensus             CTACGGAAGCCATTTTGTATAGACTTATTCTTACTATATCTGTATATCACCTCAACAGGT
 
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JMSF027M15+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMFS065D10+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMSF021P21+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMFF012B04+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMFF007A20+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMFF046B12+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMSF006J23+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
JMFF045F19+           CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
                      ____________________________________________________________
consensus             CATTCACCGCCGTTGCCGATGAAACCAGATTCCTCGAGAGATCGAGAAGAAACGGATCAT
 
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JMSF027M15+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMFS065D10+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMSF021P21+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMFF012B04+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMFF007A20+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMFF046B12+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMSF006J23+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
JMFF045F19+           CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
                      ____________________________________________________________
consensus             CAGCAGCAGGCCGTGATTGTTCGTGGTCGATATGACACCATCGGCGTTAGAGAGAGATGA
 
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JMSF027M15+           GAGAATCTGATATTGAT                                           
JMFS065D10+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGA                       
JMSF021P21+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGTTAAT        
JMFF012B04+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGTTAAT        
JMFF007A20+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGTTAAT        
JMFF046B12+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGT            
JMSF006J23+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGTTAAT        
JMFF045F19+           GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGTTAATGACTCCGG
                      ____________________________________________________________
consensus             GAGAATCTGATATTGATAGAGAGAGAGAAGGAGAAGACAGAAAATGGTTAATGACTCCGG