Contig 001765:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044G15Sequence652001765 (4)emb|CDP10439.1|1e-57unnamed protein product [Coffea canephora]390015970
JMFS085D07Sequence606001765 (4)emb|CDP10439.1|1e-56unnamed protein product [Coffea canephora]
JMFS092C01Sequence617001765 (4)emb|CDP10439.1|3e-57unnamed protein product [Coffea canephora]
JMSF052A17Sequence668001765 (4)emb|CDP10439.1|7e-115unnamed protein product [Coffea canephora]930021617ref|XP_009595072.1|1e-93PREDICTED: topless-related protein 4-like isoform X1 [Nicotiana tomentosiformis

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF052A17+ TG
                      ____________________________________________________________
consensus TG
 
. : . : . : . : . : . :
JMSF052A17+ GTGCTGCCAATTCAAACTCTGATTAATCAATGTCCGGAGCCTTGAGTTCTTCAAGGTNGG
                      ____________________________________________________________
consensus GTGCTGCCAATTCAAACTCTGATTAATCAATGTCCGGAGCCTTGAGTTCTTCAAGGTNGG
 
. : . : . : . : . : . :
JMSF052A17+ AAAGTTAAGTTTATCACGAAACAGGGGGTTTGCTTCAATCAATTTTTTCAGCTCACCAAG
                      ____________________________________________________________
consensus AAAGTTAAGTTTATCACGAAACAGGGGGTTTGCTTCAATCAATTTTTTCAGCTCACCAAG
 
. : . : . : . : . : . :
JMSF052A17+ CATAATGTTCCTAGCAGAGTTGGTGTCTCCATATTTAGATAATTGCTCATTGTCTCTGAA
                      ____________________________________________________________
consensus CATAATGTTCCTAGCAGAGTTGGTGTCTCCATATTTAGATAATTGCTCATTGTCTCTGAA
 
. : . : . : . : . : . :
JMSF052A17+ ATTCTCAAGAGTCAGAAGCTGTGTTATTTCTTTGAAAAGATCTTCATTAAAAGCAGAAAA
JMFS092C01+ TCTTTAAAAAGGTCTTCATTAAATGCTGAAAA
                      ____________________________________________________________
consensus ATTCTCAAGAGTCAGAAGCTGTGTTATTTCTTTGAAAAGGTCTTCATTAAATGCTGAAAA
 
. : . : . : . : . : . :
JMSF052A17+ AACCTTCAAGTCCTTTACTAGTATTTCAACACCTTTAGAGCGATCCTTCCTGTCAAGAGC
JMFS092C01+ CACTTTCAAGTCCTTTACTAGAATGTCAACAGCTTTAGCACGATCCTTCCTGTCAAGGGC
                      ____________________________________________________________
consensus CACTTTCAAGTCCTTTACTAGTATTTCAACAGCTTTAGCGCGATCCTTCCTGTCAAGGGC
 
. : . : . : . : . : . :
JMSF052A17+ TTCGAGATATTTTTGCTTTCTGATCTCAAAGAAGATTTTCATTGAATATCTGTTATCATC
JMFS085D07+ TCAAGATACTTTTGTTTTCGGATTTCAAAGAAAATTTTCATTGAATATCTGTTGTCATC
JMFS092C01+ TTCAAGATACTTTTGTTTTCGGATTTCAAAGAAAATTTTCATTGAATATCTGTTGTCATC
JMFF044G15+ TCAAGATACTTTTGTTTTCGGATTTCAAAGAAAATTTTCATTGAATATCTGTTGTCATC
                      ____________________________________________________________
consensus TTCAAGATACTTTTGTTTTCGGATTTCAAAGAAAATTTTCATTGAATATCTGTTGTCATC
 
. : . : . : . : . : . :
JMSF052A17+ AACCTTTGTGAAGCCTGAAAGATACTTTTCTACCTCATCCCATTCTCCATTTGTTACCAA
JMFS085D07+ AACCTTCGTGAAGCCTGATAGATACTTTTCCACCTCATCCCAGTCTCCATTTGTCACCAA
JMFS092C01+ AACCTTCGTGAAGCCTGATAGATACTTTTCCACCTCATCCCAGTCTCCATTTGTCACCAA
JMFF044G15+ AACCTTCGTGAAGCCTGATAGATACTTTTCCACCTCATCCCAGTCTCCATTTGTCACCAA
                      ____________________________________________________________
consensus AACCTTCGTGAAGCCTGATAGATACTTTTCCACCTCATCCCAGTCTCCATTTGTCACCAA
 
. : . : . : . : . : . :
JMSF052A17+ TTC
JMFS085D07+ TTCCTCAAAATATCGCATATTAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT
JMFS092C01+ TTCCTCAAAATATCGCATATTAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT
JMFF044G15+ TTCCTCAAAATATCGCATATTAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT
                      ____________________________________________________________
consensus TTCCTCAAAATATCGCATATTAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
 
. : . : . : . : . : . :
JMFS085D07+ CTCTTTGAATTTCTCCTCATCAAGAAACTGAAGAATTAAAAACACGAGCTCTCTGCTCAG
JMFS092C01+ CTCTTTGAATTTCTCCTCATCAAGAAACTGAAGAATTAAAAACACGAGCTCTCTGCTCAG
JMFF044G15+ CTCTTTGAATTTCTCCTCATCAAGAAACTGAAGAATTAAAAACACGAGCTCTCTGCTCAG
                      ____________________________________________________________
consensus CTCTTTGAATTTCTCCTCATCAAGAAACTGAAGAATTAAAAACACGAGCTCTCTGCTCAG
 
. : . : . : . : . : . :
JMFS085D07+ AGACGACATACTCGTTTTCTTCCCCTCAGTCTCCTCACCCTCGCAGATCAACACAAACGC
JMFS092C01+ AGACGACATACTCGTTTTCTTCCCCTCAGTCTCCTCACCCTCGCAGATCAACACAAACGC
JMFF044G15+ AGACGACATACTCGTTTTCTTCCCCTCAGTCTCCTCACCCTCGCAGATCAACACAAACGC
                      ____________________________________________________________
consensus AGACGACATACTCGTTTTCTTCCCCTCAGTCTCCTCACCCTCGCAGATCAACACAAACGC
 
. : . : . : . : . : . :
JMFS085D07+ CGCAATTACGCAGCCTCCATCACCAATTCACCAAATTCAAACTCTCAAGAGCCTAAAATA
JMFS092C01+ CGCAATTACGCAGCCTCCATCACCAATTCACCAAATTCAAACTCTCAAGAGCCTAAAATA
JMFF044G15+ CGCAATTACGCAGCCTCCATCACCAATTCACCAAATTCAAACTCTCAAGAGCCTAAAATA
                      ____________________________________________________________
consensus CGCAATTACGCAGCCTCCATCACCAATTCACCAAATTCAAACTCTCAAGAGCCTAAAATA
 
. : . : . : . : . : . :
JMFS085D07+ CATGCATACATCT
JMFS092C01+ CATGCATACATCTGCATATATACTCAAATACGAATGTGAATACAGAGTATACATAGCGTT
JMFF044G15+ CATGCATACATCTGCATATATACTCAAATACGAATGTGAATACAGAGTATACATAGCGTT
                      ____________________________________________________________
consensus CATGCATACATCTGCATATATACTCAAATACGAATGTGAATACAGAGTATACATAGCGTT
 
. : . : . : . : . : . :
JMFS092C01+ CATGTAAATGCATAGTTCTGTGTATATGTAGGGGTTGGGGGAAGCACTGGTACCTTGGAA
JMFF044G15+ CATGTAAATGCATAGTTCTGTGTATATGTAGGGGTTGGGGGAAGCACTGGTACCTTGGAA
                      ____________________________________________________________
consensus CATGTAAATGCATAGTTCTGTGTATATGTAGGGGTTGGGGGAAGCACTGGTACCTTGGAA
 
. : . : . : . : . : . :
JMFS092C01+ TGAATGAGAGAGGAAACAGATCAGGGTTTTTCTGTAAAGAGAA
JMFF044G15+ TGAATGAGAGAGGAAACAGATCAGGGTTTTTCTGTAAAGAGAATGGTACTTTTCGTTACT
                      ____________________________________________________________
consensus TGAATGAGAGAGGAAACAGATCAGGGTTTTTCTGTAAAGAGAATGGTACTTTTCGTTACT