Contig 001764:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044B20Sequence637001764 (4)ref|XP_006354013.1|4e-49PREDICTED: random slug protein 5-like [Solanum tuberosum]
JMFS038F10Sequence601001764 (4)ref|XP_009605251.1|3e-78PREDICTED: random slug protein 5 isoform X2 [Nicotiana tomentosiformis]
JMFS101A10Sequence617001764 (4)ref|XP_009762505.1|5e-83PREDICTED: random slug protein 5 isoform X2 [Nicotiana sylvestris]
JMFS112E11Sequence620001764 (4)ref|XP_009762505.1|3e-105PREDICTED: random slug protein 5 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS112E11+ CT
                      ____________________________________________________________
consensus CT
 
. : . : . : . : . : . :
JMFS112E11+ TGCAAAACATGAGCTGTTTCTTTAGTCACTTTCAATGAGATGTGTGAAACATTAAAGCCA
                      ____________________________________________________________
consensus TGCAAAACATGAGCTGTTTCTTTAGTCACTTTCAATGAGATGTGTGAAACATTAAAGCCA
 
. : . : . : . : . : . :
JMFS101A10+ CATCTGTTCTTGATCTTCAGGAAGGTTTACGATAGCATTC
JMFS038F10+ TCAGGAAGGTTTACGATAGCATTC
JMFS112E11+ TGGAAATCGATCAACCACACCATCTGTTCTTGATCTTCAGGAAGGTTTACGATAGCATTC
                      ____________________________________________________________
consensus TGGAAATCGATCAACCACACCATCTGTTCTTGATCTTCAGGAAGGTTTACGATAGCATTC
 
. : . : . : . : . : . :
JMFS101A10+ TCCATGCAGTACACTAAGTACCTGATTTGGCCTTTAGTTGATTTGGTGTTCTGGCATCTG
JMFS038F10+ TCCATGCAGTACACTAAGTACCTGATTTGGCCTTTAGTTGATTTGGTGTTCTGGCATCTG
JMFS112E11+ TCCATGCAGTACACTAAGTACCTGATTTGGCCTTTAGTTGATTTGGTGTTCTGGCATCTG
                      ____________________________________________________________
consensus TCCATGCAGTACACTAAGTACCTGATTTGGCCTTTAGTTGATTTGGTGTTCTGGCATCTG
 
. : . : . : . : . : . :
JMFS101A10+ GGTCTCATGACTAGAACTGTTCTTCCATGTTTATCTTTATAATCGGACCTGTAAATCTTT
JMFS038F10+ GGTCTCATGACTAGAACTGTTCTTCCATGTTTATCTTTATAATCGGACCTGTAAATCTTT
JMFS112E11+ GGTCTCATGACTAGAACTGTTCTTCCATGTTTATCTTTATAATCGGACCTGTAAATCTTT
JMFF044B20+ TCCATGTTTATCTTANTAATCGGACCTGTAAATCTTT
                      ____________________________________________________________
consensus GGTCTCATGACTAGAACTGTTCTTCCATGTTTATCTTTATAATCGGACCTGTAAATCTTT
 
. : . : . : . : . : . :
JMFS101A10+ CCAGTTTCAGCCTCAGAGGCAATATCATCCCAGCGGATATTTTCTGGTTTGTATTCCAGT
JMFS038F10+ CCAGTTTCAGCCTCAGAGGCAATATCATCCCAGCGGATATTTTCTGGTTTGTATTCCAGT
JMFS112E11+ CCAGTTTCAGCCTCAGAGGCAATATCATCCCAGCGGATATTTTCTGGTTTGTATTCCAGT
JMFF044B20+ CCAGTTTCAGCCTCAGAGGCAATATCATCCCAGCGGATATTTTCTGGTTTGTATTCCAGT
                      ____________________________________________________________
consensus CCAGTTTCAGCCTCAGAGGCAATATCATCCCAGCGGATATTTTCTGGTTTGTATTCCAGT
 
. : . : . : . : . : . :
JMFS101A10+ CTCCACTTCAGTGTTGCTTTAAGCATCTTAACAGCCTTTTTGACATTCCAGTTTCGTGCC
JMFS038F10+ CTCCACTTCAGTGTTGCTTTAAGCATCTTAACAGCCTTTTTGACATTCCAGTTTCGTGCC
JMFS112E11+ CTCCACTTCAGTGTTGCTTTAAGCATCTTAACAGCCTTTTTGACATTCCAGTTTCGTGCC
JMFF044B20+ CTCCACTTCAGTGTTGCTTTAAGCATCTTAACAGCCTTTTTGACATTCCAGTTTCGTGCC
                      ____________________________________________________________
consensus CTCCACTTCAGTGTTGCTTTAAGCATCTTAACAGCCTTTTTGACATTCCAGTTTCGTGCC
 
. : . : . : . : . : . :
JMFS101A10+ CTTAAATATCTTGATATGGATGCATCTGAACAATACAGAGCCAATTTACCAGACAGTGGG
JMFS038F10+ CTTAAATATCTTGATATGGATGCATCTGAACAATACAGAGCCAATTTACCAGACAGTGGG
JMFS112E11+ CTTAAATATCTTGATATGGATGCATCTGAACAATACAGAGCCAATTTACCAGACAGTGGG
JMFF044B20+ CTTAAATATCTTGATATGGATGCATCTGAACAATACAGAGCCAATTTACCAGACAGTGGG
                      ____________________________________________________________
consensus CTTAAATATCTTGATATGGATGCATCTGAACAATACAGAGCCAATTTACCAGACAGTGGG
 
. : . : . : . : . : . :
JMFS101A10+ CCAATCAACTTCCTCACTTCATCAATCT
JMFS038F10+ CCAATCAACTTCCTCACTTCATCAATCT
JMFS112E11+ CCAATCAACTTCCTCACTTCATCAATCTTTTGCTTCTGTGCTTCTGGGCCCAAAGAATTC
JMFF044B20+ CCAATCAACTTCCTCACTTCATCAATCTTTTGCTTCTGTGCTTCTGGGCCCAAAGAATTC
                      ____________________________________________________________
consensus CCAATCAACTTCCTCACTTCATCAATCTTTTGCTTCTGTGCTTCTGGGCCCAAAGAATTC
 
. : . : . : . : . : . :
JMFS112E11+ TCATAACCATTAGTCGAGGGCTTCTTAGACCCAATATTCATAGTCGTGCAGTGCAGGAAA
JMFF044B20+ TCATAACCATTAGTCGAGGGCTTCTTAGACCCAATATTCATAGTCGTGCAGTGCAGGAAA
                      ____________________________________________________________
consensus TCATAACCATTAGTCGAGGGCTTCTTAGACCCAATATTCATAGTCGTGCAGTGCAGGAAA
 
. : . : . : . : . : . :
JMFS112E11+ TGTGTTTACTTTAAGGTAAAAGTATTTTGTCTGATCCTGTCTCTTGACTGTTTTTCT
JMFF044B20+ TGTGTTTACTTTAAGGTAAAAGTATTTTGTCTGATCCTGTCTCTTGACTGTTTTTCTGTA
                      ____________________________________________________________
consensus TGTGTTTACTTTAAGGTAAAAGTATTTTGTCTGATCCTGTCTCTTGACTGTTTTTCTGTA
 
. : . : . : . : . : . :
JMFF044B20+ TGGGGGTATCGAGATTTCAGGAGATTGAAATGGTGGAGATTTTGAACGGGCAAAAGCCCA
                      ____________________________________________________________
consensus TGGGGGTATCGAGATTTCAGGAGATTGAAATGGTGGAGATTTTGAACGGGCAAAAGCCCA
 
. : . : . : . : . : . :
JMFF044B20+ TGGAATGGATATAGAGAGTCAACCGAGAAAAATGGTTGCCTACATCAGCGAGAAGGAAAT
                      ____________________________________________________________
consensus TGGAATGGATATAGAGAGTCAACCGAGAAAAATGGTTGCCTACATCAGCGAGAAGGAAAT
 
. : . : . : . : . : . :
JMFF044B20+ ATGGGCGGCATTGCTGCTAAAATAGTAATAATAATATATTAGGCAAGTAAATAATCTCGT
                      ____________________________________________________________
consensus ATGGGCGGCATTGCTGCTAAAATAGTAATAATAATATATTAGGCAAGTAAATAATCTCGT
 
. : . : . : . : . : . :
JMFF044B20+ ATATATTTATTAATTATATATAGAAAAAGCAATGTGATCTACAGTTGGAGAATGGCGCAC
                      ____________________________________________________________
consensus ATATATTTATTAATTATATATAGAAAAAGCAATGTGATCTACAGTTGGAGAATGGCGCAC