| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004P01 | Sequence | 671 | 001760 (6) | ref|XP_004490726.1| | 2e-102 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cicer arietinum] gb|ABI | |||||
| JMFF042H13 | Sequence | 649 | 001760 (6) | ref|XP_004490726.1| | 1e-102 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cicer arietinum] gb|ABI | 583 | 022384 | gb|AAL99219.1| | 1e-46 | ubiquitin-conjugating enzyme E2 [Gossypium hirsutum] gb|AAL99221.1| ubiquitin-co |
| JMFN033F13 | Sequence | 605 | 001760 (6) | ref|XP_004490726.1| | 8e-103 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cicer arietinum] gb|ABI | |||||
| JMFN043P24 | Sequence | 607 | 001760 (6) | ref|XP_004490726.1| | 9e-103 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cicer arietinum] gb|ABI | |||||
| JMSF014K13 | Sequence | 239 | 001760 (6) | gb|AAG40371.1|AF325019_1 | 6e-23 | AT4g27960 [Arabidopsis thaliana] | 752 | 001760 (6) | ref|XP_004490726.1| | 4e-101 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cicer arietinum] gb|ABI |
This contig is upended
. : . : . : . : . : . :
rJMSF014K13- ATGTCACAAGCAAA
____________________________________________________________
consensus ATGTCACAAGCAAA
. : . : . : . : . : . :
rJMSF014K13- TATCCAATAATGCAACAACACCTACAGATGTCTGAACCAAGAAAAACACAACCCCACTTA
____________________________________________________________
consensus TATCCAATAATGCAACAACACCTACAGATGTCTGAACCAAGAAAAACACAACCCCACTTA
. : . : . : . : . : . :
rJMSF014K13- AATCAATGTTAACATCACATTAAACTTCTCCACCCCCCTTCACCAGTCCAAACCCATGAT
____________________________________________________________
consensus AATCAATGTTAACATCACATTAAACTTCTCCACCCCCCTTCACCAGTCCAAACCCATGAT
. : . : . : . : . : . :
rJMSF014K13- ATTCACAAAAAAAAGATTCATGAAAATTGTTGCCTCAAATGAGGAGAACAAAATAGACTT
JMFN043P24+ ACAAAATAGACTT
JMFN033F13+ CAAAATAGACTT
JMFF042H13+ ATTCATGAAAATTGTTGCCTCAAATGAGGAGAACAAAATAGACTT
____________________________________________________________
consensus ATTCACAAAAAAAAGATTCATGAAAATTGTTGCCTCAAATGAGGAGAACAAAATAGACTT
. : . : . : . : . : . :
rJMSF014K13- AGTTCATTACCAACTTATTGCAATACTGGAGTTAACAGAATTTCGAGCATTCCAGACCAG
JMFN043P24+ AGTTCATTACCAACTTATTGCAATACTGGAGTTAACAGAATTTCGAGCATTCCAGACCAG
JMFN033F13+ AGTTCATTACCAACTTATTGCAATACTGGAGTTAACAGAATTTCGAGCATTCCAGACCAG
JMFF042H13+ AGTTCATTACCAACTTATTGCAATACTGGAGTTAACAGAATTTCGAGCATTCCAGACCAG
____________________________________________________________
consensus AGTTCATTACCAACTTATTGCAATACTGGAGTTAACAGAATTTCGAGCATTCCAGACCAG
. : . : . : . : . : . :
rJMSF014K13- CCTTTGCCTTATTAACCCATAGCATACTTCTGTGTCCAGCTACGAGCAGTGGCCTCATAT
JMFN043P24+ CCTTTGCCTTATTAACCCATAGCATACTTCTGTGTCCAGCTACGAGCAGTGGCCTCATAT
JMFN033F13+ CCTTTGCCTTATTAACCCATAGCATACTTCTGTGTCCAGCTACGAGCAGTGGCCTCATAT
rJMFF004P01- CCCATAGCATACTTCTGTGTCCAGCTACGAGCAGTGGCCTCATAT
JMFF042H13+ CCTTTGCCTTATTAACCCATAGCATACTTCTGTGTCCAGCTACGAGCAGTGGCCTCATAT
____________________________________________________________
consensus CCTTTGCCTTATTAACCCATAGCATACTTCTGTGTCCAGCTACGAGCAGTGGCCTCATAT
. : . : . : . : . : . :
rJMSF014K13- TTGGCCCTATCAGTCTTGTACATGTGTGCAATTTCGGGGACAAGTGGATCATCAGGGTTA
JMFN043P24+ TTGGCCCTATCAGTCTTGTACATGTGTGCAATTTCGGGGACAAGTGGATCATCAGGGTTA
JMFN033F13+ TTGGCCCTATCAGTCTTGTACATGTGTGCAATTTCGGGGACAAGTGGATCATCAGGGTTA
rJMFF004P01- TTGGCCCTATCAGTCTTGTACATGTGTGCAATTTCGGGGACAAGTGGATCATCAGGGTTA
JMFF042H13+ TTGGCCCTATCAGTCTTGTACATGTGTGCAATTTCGGGGACAAGTGGATCATCAGGGTTA
____________________________________________________________
consensus TTGGCCCTATCAGTCTTGTACATGTGTGCAATTTCGGGGACAAGTGGATCATCAGGGTTA
. : . : . : . : . : . :
rJMSF014K13- GGATCCGTCAAAAGAGAGCAGATGGACAACAGAACCTTGGATATGGTGAGTGCTGGACTC
JMFN043P24+ GGATCCGTCAAAAGAGAGCAGATGGACAACAGAACCTTGGATATGGTGAGTGCTGGACTC
JMFN033F13+ GGATCCGTCAAAAGAGAGCAGATGGACAACAGAACCTTGGATATGGTGAGTGCTGGACTC
rJMFF004P01- GGATCCGTCAAAAGAGAGCAGATGGACAACAGAACCTTGGATATGGTGAGTGCTGGACTC
JMFF042H13+ GGATCCGTCAAAAGAGAGCAGATGGACAACAGAACCTTGGATATGGTGAGTGCTGGACTC
____________________________________________________________
consensus GGATCCGTCAAAAGAGAGCAGATGGACAACAGAACCTTGGATATGGTGAGTGCTGGACTC
. : . : . : . : . : . :
rJMSF014K13- CACTGCTCTTTGAGAATATCTAGGCAGATACTTCCGTTGCTATTGATGTTTGGGTGAAAG
JMFN043P24+ CACTGCTCTTTGAGAATATCTAGGCAGATACTTCCGTTGCTATTGATGTTTGGGTGAAAG
JMFN033F13+ CACTGCTCTTTGAGAATATCTAGGCAGATACTTCCGTTGCTATTGATGTTTGGGTGAAAG
rJMFF004P01- CACTGCTCTTTGAGAATATCTAGGCAGATACTTCCGTTGCTATTGATGTTTGGGTGAAAG
JMFF042H13+ CACTGCTCTTTGAGAATATCTAGGCAGATACTTCCGTTGCTATTGATGTTTGGGTGAAAG
____________________________________________________________
consensus CACTGCTCTTTGAGAATATCTAGGCAGATACTTCCGTTGCTATTGATGTTTGGGTGAAAG
. : . : . : . : . : . :
rJMSF014K13- ACCTTAGTTCTAAATGCAACCTTAGGTGGCTTAAAAGGGTAATCAGGTGGGAAATGAATT
JMFN043P24+ ACCTTAGTTCTAAATGCAACCTTAGGTGGCTTAAAAGGGTAATCAGGTGGGAAATGAATT
JMFN033F13+ ACCTTAGTTCTAAATGCAACCTTAGGTGGCTTAAAAGGGTAATCAGGTGGGAAATGAATT
rJMFF004P01- ACCTTAGTTCTAAATGCAACCTTAGGTGGCTTAAAAGGGTAATCAGGTGGGAAATGAATT
JMFF042H13+ ACCTTAGTTCTAAATGCAACCTTAGGTGGCTTAAAAGGGTAATCAGGTGGGAAATGAATT
____________________________________________________________
consensus ACCTTAGTTCTAAATGCAACCTTAGGTGGCTTAAAAGGGTAATCAGGTGGGAAATGAATT
. : . : . : . : . : . :
rJMSF014K13- GACACCAGAAAAACACCTCCAGTATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
JMFN043P24+ GACACCAGAAAAACACCTCCAGTATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
JMFN033F13+ GACACCAGAAAAACACCTCCAGTATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
rJMFF004P01- GACACCAGAAAAACACCTCCAGTATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
JMSF014K13+ TATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
JMFF042H13+ GACACCAGAAAAACACCTCCAGTATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
____________________________________________________________
consensus GACACCAGAAAAACACCTCCAGTATATGGGCTATCAGATGGTCCCATAATAGTTGCCTGC
. : . : . : . : . : . :
rJMSF014K13- CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
JMFN043P24+ CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
JMFN033F13+ CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
rJMFF004P01- CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
JMSF014K13+ CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
JMFF042H13+ CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
____________________________________________________________
consensus CATTGGAACATATCTTCCGCCACAGGACCAGCGCTGCATGATGTGGGAGGGTCCTTCTGC
. : . : . : . : . : . :
rJMSF014K13- AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCNTGAATTAATCCGAACAACTTAAA
JMFN043P24+ AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCATGAATTAATCCGAACAACTTAAA
JMFN033F13+ AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCATGAATTAATCCGAACAACTTAAA
rJMFF004P01- AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCATGAATTAATCCGAACAACTTAAA
JMSF014K13+ AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCAT
JMFF042H13+ AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCATGAATTAATCCGAACAACTTAAA
____________________________________________________________
consensus AGATCCTTGAGCTCCTTCAAAATGCGCTTCGACGCCATGAATTAATCCGAACAACTTAAA
. : . : . : . : . : . :
rJMSF014K13- ATCCCTGAGGTCGGAAGA
JMFN043P24+ ATCCCTGAGGTCGGAAGACGGAGGAGACGAGCTGAAATGGCGACGACGCGCGG
JMFN033F13+ ATCCCTGAGGTCGGAAGACGGAGGAGACGAGCTGAAATGGCGACGACGCGCGG
rJMFF004P01- ATCCCTGA
JMFF042H13+ ATCCCTGAGGTCGGAAGACGGAGGAGACGAGCTGAAATGGCGACGACGCGCGGTGATCGG
____________________________________________________________
consensus ATCCCTGAGGTCGGAAGACGGAGGAGACGAGCTGAAATGGCGACGACGCGCGGTGATCGG