Contig 001758:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF049L23+                                                      AGTACTGTACTGGGAGT
                      ____________________________________________________________
consensus                                                        AGTACTGTACTGGGAGT
 
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JMSF049L23+           AGTTTGAGATTTGTTACTTGTAGAGCCGGAAACCTGGGTTTTAGTGAATTCTATCCTGAC
JMFF042B08+                               TAGAGCCGGAAACCTGGGTNNTAGTGAATTCTATCCTGAC
                      ____________________________________________________________
consensus             AGTTTGAGATTTGTTACTTGTAGAGCCGGAAACCTGGGTTTTAGTGAATTCTATCCTGAC
 
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JMSF049L23+           GGGAAAGTCAGGGACGACGAAACGGTCGGAATCGGAACCCAAACTCTCGAGAATCTTTGA
JMFF042B08+           GGGAAAGTCAGGGACGACGAAACGGTCGGAATCGGAACCCAAACTCTCGAGAATCTTTGA
                      ____________________________________________________________
consensus             GGGAAAGTCAGGGACGACGAAACGGTCGGAATCGGAACCCAAACTCTCGAGAATCTTTGA
 
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JMSF049L23+           CGCCATTATTCTGTGGTTGCAGAGGAGGGAGAAGCAACAGGTGCCGTGGAAAACGAGGCG
JMFF042B08+           CGCCATTATTCTGTGGTTGCAGAGGAGGGAGAAGCAACAGGTGCCGTGGAAAACGAGGCG
                      ____________________________________________________________
consensus             CGCCATTATTCTGTGGTTGCAGAGGAGGGAGAAGCAACAGGTGCCGTGGAAAACGAGGCG
 
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JMSF049L23+           GGGGATGTTGAGGCGCAGGGCGATCTCCGCCGTCCATGGCAACCCCATGTCGGAGATGAG
JMFF042B08+           GGGGATGTTGAGGCGCAGGGCGATCTCCGCCGTCCATGGCAACCCCATGTCGGAGATGAG
                      ____________________________________________________________
consensus             GGGGATGTTGAGGCGCAGGGCGATCTCCGCCGTCCATGGCAACCCCATGTCGGAGATGAG
 
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JMSF049L23+           GCAACTGGGGCGCGGCTGAATCCGTTCCACCACCGTCTCCGCTTCTTGCCGTAGCATGTT
JMFF042B08+           GCAACT-GGGCGCGGCTGAATCCGTTCCACCACCGTCTCCGCTTCTTGCCGTAGCATGTT
                      ____________________________________________________________
consensus             GCAACTGGGGCGCGGCTGAATCCGTTCCACCACCGTCTCCGCTTCTTGCCGTAGCATGTT
 
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JMSF049L23+           GATGGCGGCGAAGAAGTTGGGGGCGAGGTCGAGGGAAGGAAGCGCGTCGATGCTCTCGCA
JMFF042B08+           GATGGCGGCGAAGAAGTTGGGGGCGAGGTCGAGGGAAGGAAGCGCGTCGATGCTCTCGCA
                      ____________________________________________________________
consensus             GATGGCGGCGAAGAAGTTGGGGGCGAGGTCGAGGGAAGGAAGCGCGTCGATGCTCTCGCA
 
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JMSF049L23+           GGCTTCCGGCAGGCCGGCGTCGGAGCTGGGGAACCTGAGCTCGAGCAGGTGGATGTTGAG
JMFF042B08+           GGCTTCCGGCAGGCCGGCGTCGGAGCTGGGGAACCTGAGCTCGAGCAGGTGGATGTTGAG
                      ____________________________________________________________
consensus             GGCTTCCGGCAGGCCGGCGTCGGAGCTGGGGAACCTGAGCTCGAGCAGGTGGATGTTGAG
 
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JMSF049L23+           GCCGGCGGCGACGGCGCGAGAGAGGGTGGCGCGGAAGCGGGCGGCGTTGAGTGGGGTGGT
JMFF042B08+           GCCGGCGGCGACGGCGCGAGAGAGGGTGGCGCGGAAGCGGGCGGCGTTGAGTGGGGTGGT
                      ____________________________________________________________
consensus             GCCGGCGGCGACGGCGCGAGAGAGGGTGGCGCGGAAGCGGGCGGCGTTGAGTGGGGTGGT
 
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JMSF049L23+           GAGTATGGTGACGGCGAGTCCAGGGCGGCGGGCGAGGAGCTTGGCAATGTCCACCATTGG
JMFF042B08+           GAGTATGGTGACGGCGAGTCCAGGGCGGCGGGCGAGGAGCTTGGCAATGTCCACCATTGG
                      ____________________________________________________________
consensus             GAGTATGGTGACGGCGAGTCCAGGGCGGCGGGCGAGGAGCTTGGCAATGTCCACCATTGG
 
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JMSF049L23+           GATCATGTGGCCTGGGGCCATTAGAGGGAACAAGACAAAGTGAAGCTGCTGGTCGTTCTG
JMFF042B08+           GATCATGTGGCCTGGGGCCATTAGAGGGAACAAGACAAAGTGAAGCTGCTGGTCGTTCTG
                      ____________________________________________________________
consensus             GATCATGTGGCCTGGGGCCATTAGAGGGAACAAGACAAAGTGAAGCTGCTGGTCGTTCTG
 
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JMSF049L23+           GGATTCGGACGCCATTGAAGACCAAATTGTAGGTCGATCGCTTAGATATCTGATCTTGTC
JMFF042B08+           GGATTCGGACGCCATTGAAGACCAAATTGTAGGTCGATCGCTTAGATATCTGATATTGTC
                      ____________________________________________________________
consensus             GGATTCGGACGCCATTGAAGACCAAATTGTAGGTCGATCGCTTAGATATCTGATCTTGTC