Contig 001753:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041G24Sequence184001753 (2)605011588 (18)ref|XP_010317149.1|4e-53PREDICTED: STS14 protein [Solanum lycopersicum]
JMFF041I18Sequence639001753 (2)ref|XP_007152389.1|3e-75hypothetical protein PHAVU_004G1259001g, partial [Phaseolus vulgaris] gb|ESW2438618019155emb|CDP05283.1|7e-13unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF041I18+ TCAGAAATAAGCCTCAGATCAACTTGAAGCACTGGATATTTTG
                      ____________________________________________________________
consensus TCAGAAATAAGCCTCAGATCAACTTGAAGCACTGGATATTTTG
 
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JMFF041I18+ ATTTCTTATTTGACATGATAAACATATTGTCCTTTTTGTCTATCAATGTTGTCATATCTT
                      ____________________________________________________________
consensus ATTTCTTATTTGACATGATAAACATATTGTCCTTTTTGTCTATCAATGTTGTCATATCTT
 
. : . : . : . : . : . :
JMFF041I18+ CAGAATTTTCATTATCCAGGGAAAAAACATCTTGAAATTGAAAAGATTTAGTAGCATTTG
                      ____________________________________________________________
consensus CAGAATTTTCATTATCCAGGGAAAAAACATCTTGAAATTGAAAAGATTTAGTAGCATTTG
 
. : . : . : . : . : . :
JMFF041I18+ CCTCATGGGTTTCATTTTTCTTGGCTTTCTCATGTGTAATCATTGCAACAGTCTCCAGTA
                      ____________________________________________________________
consensus CCTCATGGGTTTCATTTTTCTTGGCTTTCTCATGTGTAATCATTGCAACAGTCTCCAGTA
 
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JMFF041I18+ CAGCTTCTTGATCAGCTACAGAGCTGTTAAAGCTGCTTTTCTCTGAACCTTCAGGTTGAT
                      ____________________________________________________________
consensus CAGCTTCTTGATCAGCTACAGAGCTGTTAAAGCTGCTTTTCTCTGAACCTTCAGGTTGAT
 
. : . : . : . : . : . :
JMFF041I18+ CGTTCTCCGAAAACTCTTTTTCGAGGACACGATCAAACATCTTGGCGATACTGCCTTCTC
                      ____________________________________________________________
consensus CGTTCTCCGAAAACTCTTTTTCGAGGACACGATCAAACATCTTGGCGATACTGCCTTCTC
 
. : . : . : . : . : . :
JMFF041I18+ CATTCTCCGGCGCCGTCGTATTAACTAAATTACCGTAAAAGCGCTCCCTAATCTCCTGCT
                      ____________________________________________________________
consensus CATTCTCCGGCGCCGTCGTATTAACTAAATTACCGTAAAAGCGCTCCCTAATCTCCTGCT
 
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JMFF041I18+ CCGATCTGGCGGCAAATGCCGTGCTCCCGCAGGACGCGATTGCAATCAACACAAGCAAAA
JMFF041G24+ AAAA
                      ____________________________________________________________
consensus CCGATCTGGCGGCAAATGCCGTGCTCCCGCAGGACGCGATTGCAATCAACACAAGCAAAA
 
. : . : . : . : . : . :
JMFF041I18+ TCCGAATTGAGGACCGGTTGTTCTCCCCGACGCAAACCCTCGCCATTGCAGAGCGAGAGG
JMFF041G24+ TCCGAATTGAGGACCGGTTGTTCTCCCCGACGCAAACCCTCGCCATTGCAGAGCGAGAGG
                      ____________________________________________________________
consensus TCCGAATTGAGGACCGGTTGTTCTCCCCGACGCAAACCCTCGCCATTGCAGAGCGAGAGG
 
. : . : . : . : . : . :
JMFF041I18+ AGAAATCGAAGTGAATCAACAACGCCTCGGCTGATTGTATTCACGAGAAACCGTCAAATT
JMFF041G24+ AGAAATCGAAGTGAATCAACAACGCCTCGGCTGATTGTATTCACGAGAAACCGTCAAATT
                      ____________________________________________________________
consensus AGAAATCGAAGTGAATCAACAACGCCTCGGCTGATTGTATTCACGAGAAACCGTCAAATT
 
. : . : . : . : . : . :
JMFF041I18+ CAGATCGGAGAGAGGGAGAGGTGTG
JMFF041G24+ CAGATCGGAGAGAGGGAGAGGTGTGAAGTGTTAGAACCGACCTCGCTGTCCAGACAGCGA
                      ____________________________________________________________
consensus CAGATCGGAGAGAGGGAGAGGTGTGAAGTGTTAGAACCGACCTCGCTGTCCAGACAGCGA