Contig 001750:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040M19Sequence439001750 (4)ref|XP_011096182.1|47.0PREDICTED: uncharacterized protein LOC105175444 [Sesamum indicum]639002657 (4)emb|CDO99657.1|1e-27unnamed protein product [Coffea canephora]
JMSF010O20Sequence250001750 (4)gb|EYU27881.1|6e-04hypothetical protein MIMGU_mgv1a020026mg [Erythranthe guttata]717002657 (4)ref|XP_003635067.1|174PREDICTED: uncharacterized protein LOC100246768 [Vitis vinifera] emb|CBI40873.3|
JMSF014D19Sequence486001750 (4)ref|XP_011096182.1|124PREDICTED: uncharacterized protein LOC105175444 [Sesamum indicum]787002657 (4)ref|XP_003635067.1|196PREDICTED: uncharacterized protein LOC100246768 [Vitis vinifera] emb|CBI40873.3|
JMSF016P20Sequence229001750 (4)732002657 (4)emb|CDO99657.1|4e-53unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF014D19+                                                                   GGCA
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consensus                                                                     GGCA
 
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JMSF014D19+           ATCACGAGAGCGACCATATAAATAAATCCNTGAATTAAACCAGACCCAGAACCAGCCCGT
                      ____________________________________________________________
consensus             ATCACGAGAGCGACCATATAAATAAATCCNTGAATTAAACCAGACCCAGAACCAGCCCGT
 
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JMSF014D19+           TTCATGTTTTTCCCAAATCTGTAGCATGGACAACAAGTGGATTGAATAGCGATTCGACGA
JMFF040M19+                                                   ATTGAATAGCGATTCGACGA
                      ____________________________________________________________
consensus             TTCATGTTTTTCCCAAATCTGTAGCATGGACAACAAGTGGATTGAATAGCGATTCGACGA
 
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JMSF014D19+           TCATCGAGACAATCATAGAGAAGCTCGCCTTCCCACATCCGGAAAGCCCCTCTCCCGTCT
JMFF040M19+           TCATCGAGACAATCATAGAGAAGCTCGCCTTCCCACATCCGGAAAGCCCCTCTCCCGTCT
                      ____________________________________________________________
consensus             TCATCGAGACAATCATAGAGAAGCTCGCCTTCCCACATCCGGAAAGCCCCTCTCCCGTCT
 
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JMSF014D19+           CCATTCCCGTATCCATACCCATCGATATCCTCTTCATCGTTCAAATCCACCAACTTCCCC
JMSF010O20+                                            TCATNGTTCAAATCCACCAACTTCCCC
JMFF040M19+           CCATTCCCGTATCCATACCCATCGATATCCT-ATCATCGTTCAAATCCACCAACTTCCCC
                      ____________________________________________________________
consensus             CCATTCCCGTATCCATACCCATCGATATCCTCTTCATCGTTCAAATCCACCAACTTCCCC
 
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JMSF014D19+           CATTTCCCGTTCTGGGCCTGCATGGCCACCGTCGCGCACAGCACATCGAAATCCAACACA
JMSF016P20+                        GGGCCTGCATGGCCACCGTCGCGCACAGCACATCGAAATCCAACACA
JMSF010O20+           CATTTCCCGTTNTGGGCCTGCATGGCCACCGTCGCGCACAGCACATCGAAATCCAACACA
JMFF040M19+           CATTTCCCGTTCTGGGCCTGCATGGCCACCGTCGCGCACAGCACATCGAAATCCAACACA
                      ____________________________________________________________
consensus             CATTTCCCGTTCTGGGCCTGCATGGCCACCGTCGCGCACAGCACATCGAAATCCAACACA
 
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JMSF014D19+           GCCACCCCTTCCAACAACCTCTCCTCCTCCTCCCCTCTGACATCGGCGCCAACCACGCCC
JMSF016P20+           GCCACCCCTTCCAACAACCTCTCCTCCTCCTCCCCTCTGACATCGGCGCCAACCACGCCC
JMSF010O20+           GCCACCCCTTCCAACAACCTCTCCTCCTCCTCCCCTCTGACATCGGCGCCAACCACGCCC
JMFF040M19+           GCCACCCCTTCCAACAACCTCTCCTCCTCCTCCCCTCTGACATCGGCGCCAACCACGCCC
                      ____________________________________________________________
consensus             GCCACCCCTTCCAACAACCTCTCCTCCTCCTCCCCTCTGACATCGGCGCCAACCACGCCC
 
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JMSF014D19+           TTCTCCAACGCCTCCATTTCCCCCATTCCTCCTCTTTCTCTCTCTTAAATTTATGCAGAT
JMSF016P20+           TTCTCCAACGCCTCCATTTCCCCCATTCCTCCTCTTTCTCTCTCTTAAATTTATGCAGAT
JMSF010O20+           TTCTCCAACGCCTCCATTTCCCCCATTCCTCCTCTTTCTCTCTCTTAAATTTATGCAGAT
JMFF040M19+           TTCTCCAACGCCTCCATTTCCCCCATTCCTCCTCTTTCTCTCTCTTAAATTTATGCAGAT
                      ____________________________________________________________
consensus             TTCTCCAACGCCTCCATTTCCCCCATTCCTCCTCTTTCTCTCTCTTAAATTTATGCAGAT
 
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JMSF014D19+           AAAGATGAAGAGAGATACAGATGCAGAAATGGGGCGTGTAAACGATGACGATATTATGTA
JMSF016P20+           AAAGATGAAGAGAGATACAGATGCAGAAATGGGGCGTGTAAACGATGACGATATTATGTA
JMSF010O20+           AAAGATGAAGAGAGATACAGAT                                      
JMFF040M19+           AAAGATGAAGAGAGATACAGATGCAGAAATGGGGCGTGTAAACGATGACGATATTATGTA
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consensus             AAAGATGAAGAGAGATACAGATGCAGAAATGGGGCGTGTAAACGATGACGATATTATGTA
 
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JMSF014D19+           T                                                           
JMSF016P20+           T                                                           
JMFF040M19+           TACAAAAGGCTGTATAATTATTAATTAGGTGAAGATATGGTGGCTGGAGAATGGCGACCC
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consensus             TACAAAAGGCTGTATAATTATTAATTAGGTGAAGATATGGTGGCTGGAGAATGGCGACCC