clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005P10 | Sequence | 349 | 001746 (5) | ref|XP_011088387.1| | 6e-28 | PREDICTED: cyclase-associated protein 1 [Sesamum indicum] | 692 | 011064 (5) | gb|KDO49088.1| | 7e-100 | hypothetical protein CISIN_1g016407mg [Citrus sinensis] |
JMFF014N20 | Sequence | 517 | 001746 (5) | emb|CDO97057.1| | 3e-64 | unnamed protein product [Coffea canephora] | 690 | 011064 (5) | gb|KDO49088.1| | 4e-74 | hypothetical protein CISIN_1g016407mg [Citrus sinensis] |
JMFF023L03 | Sequence | 496 | 001746 (5) | emb|CDO97057.1| | 9e-61 | unnamed protein product [Coffea canephora] | 725 | 011064 (5) | gb|KDO49088.1| | 9e-98 | hypothetical protein CISIN_1g016407mg [Citrus sinensis] |
JMFF033D21 | Sequence | 586 | 001746 (5) | emb|CDO97057.1| | 3e-83 | unnamed protein product [Coffea canephora] | 775 | 011064 (5) | gb|KDO49088.1| | 9e-119 | hypothetical protein CISIN_1g016407mg [Citrus sinensis] |
JMFF040A08 | Sequence | 608 | 001746 (5) | emb|CDO97057.1| | 6e-81 | unnamed protein product [Coffea canephora] | 694 | 011064 (5) | ref|XP_006423253.1| | 9e-73 | hypothetical protein CICLE_v10028340mg [Citrus clementina] ref|XP_006487151.1| P |
This contig is upended
. : . : . : . : . : . :
JMFF033D21+ ATTGTAAAACTCAGC
JMFF040A08+ AACTCAGC
____________________________________________________________
consensus ATTGTAAAACTCAGC
. : . : . : . : . : . :
JMFF033D21+ CATCTGCCAGCTTTCTTCAACATGGGCTATGGGCATGCTCATACCGCAATCTTTTCCTGT
JMFF040A08+ CATCTGCCAGCTTTCTTCAACATGGGCTATGGGCATGCTCATACCGCAATCTTTTCCTGT
____________________________________________________________
consensus CATCTGCCAGCTTTCTTCAACATGGGCTATGGGCATGCTCATACCGCAATCTTTTCCTGT
. : . : . : . : . : . :
JMFF033D21+ GTAGGCAATCCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
JMFF014N20+ CCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
JMFF023L03+ CCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
JMFF040A08+ GTAGGCAATCCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
____________________________________________________________
consensus GTAGGCAATCCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
. : . : . : . : . : . :
JMFF033D21+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
JMFF014N20+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
JMFF023L03+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
JMFF040A08+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
____________________________________________________________
consensus ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
. : . : . : . : . : . :
JMFF033D21+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
JMFF014N20+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
JMFF023L03+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
JMFF005P10+ CTTGGTTTTGATTAGAAG
JMFF040A08+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
____________________________________________________________
consensus CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
. : . : . : . : . : . :
JMFF033D21+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
JMFF014N20+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
JMFF023L03+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
JMFF005P10+ CTCCTTNTGAGCAGAGAATGCATCCTTTACAATCNTAGTAGCATCCAAAACTTGTCCTCC
JMFF040A08+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
____________________________________________________________
consensus CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
. : . : . : . : . : . :
JMFF033D21+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF014N20+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF023L03+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF005P10+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF040A08+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
____________________________________________________________
consensus AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
. : . : . : . : . : . :
JMFF033D21+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF014N20+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF023L03+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF005P10+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF040A08+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
____________________________________________________________
consensus AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
. : . : . : . : . : . :
JMFF033D21+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF014N20+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF023L03+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF005P10+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF040A08+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
____________________________________________________________
consensus AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
. : . : . : . : . : . :
JMFF033D21+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF014N20+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF023L03+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF005P10+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF040A08+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
____________________________________________________________
consensus CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
. : . : . : . : . : . :
JMFF033D21+ TAGACTTGGAGTTGAAGTAGATCTGAATAA
JMFF014N20+ TAGACTTGGAGTTGAAGTAGATCTGAATAA
JMFF023L03+ TAAACTT
JMFF005P10+ TAGACTTGGAGTTGAAGTAGATCTGAATAA
JMFF040A08+ TAGACTTGGAGTTGAAGTAGATCTGAATAATGAAGACTACTGCTTGCACATATGCTTCAT
____________________________________________________________
consensus TAGACTTGGAGTTGAAGTAGATCTGAATAATGAAGACTACTGCTTGCACATATGCTTCAT