Contig 001740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037I04Sequence546001740 (2)ref|XP_009783158.1|3e-21PREDICTED: uncharacterized protein LOC104231801 isoform X3 [Nicotiana sylvestri619012383 (2)ref|XP_004253455.1|176PREDICTED: uncharacterized protein LOC101245935, partial [Solanum lycopersicum]
JMSF012E10Sequence237001740 (2)611012383 (2)ref|XP_004253455.1|176PREDICTED: uncharacterized protein LOC101245935, partial [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF037I04+                                                                 CTTCCA
                      ____________________________________________________________
consensus                                                                   CTTCCA
 
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JMFF037I04+           GCCACAACACCCCATCTTATTGAGGATATTACTATGGGAAGTGCAAAGAAACACCCAAAG
                      ____________________________________________________________
consensus             GCCACAACACCCCATCTTATTGAGGATATTACTATGGGAAGTGCAAAGAAACACCCAAAG
 
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JMFF037I04+           TAATTCTAAGAAATGGCACTTGCTATTAACCAAAAGTGCAAAGCTGTAATCTTGACAAAG
                      ____________________________________________________________
consensus             TAATTCTAAGAAATGGCACTTGCTATTAACCAAAAGTGCAAAGCTGTAATCTTGACAAAG
 
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JMFF037I04+           CCATGTTCCTATGTAGCCAATTAACACCTTACTTAACTCCCTTAGCTCAATTGCAAGAGA
                      ____________________________________________________________
consensus             CCATGTTCCTATGTAGCCAATTAACACCTTACTTAACTCCCTTAGCTCAATTGCAAGAGA
 
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JMSF012E10+                                                                    CCT
JMFF037I04+           ATTGCTCAAGAGATAGGCTAACCCAGAAACAGCAGCAAACATAGCAGTCTCCACAAGCCT
                      ____________________________________________________________
consensus             ATTGCTCAAGAGATAGGCTAACCCAGAAACAGCAGCAAACATAGCAGTCTCCACAAGCCT
 
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JMSF012E10+           CAGGGTGTTCTGAAAAACCTCCCCATCTTTCGCCAAGTACTCATATCTCTCATCCGAGCT
JMFF037I04+           CAGGGTGTTCTGAAAAACCTCCCCATCTTTCGCCAAGTACTCATATCTCTCATCCGAGCT
                      ____________________________________________________________
consensus             CAGGGTGTTCTGAAAAACCTCCCCATCTTTCGCCAAGTACTCATATCTCTCATCCGAGCT
 
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JMSF012E10+           TTCTCCTTCTTTGCTGCTCCACGTTGGGGTCTGGGTAGTTGATGCCCTGATATGTCCATT
JMFF037I04+           TTCTTCTTCTTTGCTGCTCCACGTTGGGGTCTGGGTAGTTGATGCCCTGATATGTCCATT
                      ____________________________________________________________
consensus             TTCTTCTTCTTTGCTGCTCCACGTTGGGGTCTGGGTAGTTGATGCCCTGATATGTCCATT
 
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JMSF012E10+           TCTGGAATCGGTGAAATCGCAAGAAAGGGATGTTGGTGAACCAGAAGAGAGATAGGGAAA
JMFF037I04+           TCTGGAATCGGTGAAATCGCAAGAAAGGGATGTTGGTGAACCAGAAGAGAGATAGGGAAA
                      ____________________________________________________________
consensus             TCTGGAATCGGTGAAATCGCAAGAAAGGGATGTTGGTGAACCAGAAGAGAGATAGGGAAA
 
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JMSF012E10+           GCGATGCGGACAGAAAGCGGAGGAGAGGGAAGGAAGGACGGTTCTGGAAAGT        
JMFF037I04+           GCGATGCGGACAGAAAGCGGAGGAGAGGGAAGGAAGGACGGTTCTGGAAAGTCGAGAAGG
                      ____________________________________________________________
consensus             GCGATGCGGACAGAAAGCGGAGGAGAGGGAAGGAAGGACGGTTCTGGAAAGTCGAGAAGG
 
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JMFF037I04+           TTTGGTAAGATGGTGGTGAATTTGAAGCTTGAGAAGATTCATGGAGGATTTTTGCGCACT
                      ____________________________________________________________
consensus             TTTGGTAAGATGGTGGTGAATTTGAAGCTTGAGAAGATTCATGGAGGATTTTTGCGCACT