Contig 001738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037E03Sequence487001738 (5)694001738 (5)dbj|BAF76429.1|4e-28basic region leucine zipper protein [Nicotiana tabacum]
JMFN038M18Sequence619001738 (5)ref|XP_002510740.1|1e-04conserved hypothetical protein [Ricinus communis] gb|EEF52927.1| conserved hypot
JMSF019J21Sequence231001738 (5)791001738 (5)ref|XP_009608063.1|4e-49PREDICTED: bZIP transcription factor 60 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF037E03-             AATGACCATACGCTTATTAACAGAATTCTATGTTTAGGGCCAAGAACATCTTATTGC
                      ____________________________________________________________
consensus                AATGACCATACGCTTATTAACAGAATTCTATGTTTAGGGCCAAGAACATCTTATTGC
 
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rJMFF037E03-          TATAAGACAACAGATAGTTATAAGTTCACTAAGGGGGGTTGGTTCAAAAGATAAGTTAAA
rJMSF019J21-               GACAACAGATAGTTATAAGTTCACTAAGGGGGGTTGGTTCAAAAGATAAGTTAAA
                      ____________________________________________________________
consensus             TATAAGACAACAGATAGTTATAAGTTCACTAAGGGGGGTTGGTTCAAAAGATAAGTTAAA
 
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rJMFF037E03-          CAAGGGAATCAAGAGATAGAACACCATACAAACTCTGAAACTCAACACTACTCTTTAGTT
rJMSF019J21-          CAAGGGAATCAAAAGATAGAACACCATACAAACTCTGAAACTCAACACTACTCTTTAGTT
                      ____________________________________________________________
consensus             CAAGGGAATCAAGAGATAGAACACCATACAAACTCTGAAACTCAACACTACTCTTTAGTT
 
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rJMFF037E03-          TTTAATGATCACTAACTGGATAATAGAACTGTAGAAAACCCTGCTGAGAAGAATCCTCGA
rJMSF019J21-          TTTAATGATCACTAACTGGATAATAGAACTGTAGAAAACCCTGCTGAGAAGAATCCTCGA
                      ____________________________________________________________
consensus             TTTAATGATCACTAACTGGATAATAGAACTGTAGAAAACCCTGCTGAGAAGAATCCTCGA
 
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rJMFF037E03-          CCAATAACAAGGATCCTTAGAAGGATTGATCACCAGGCCAGCATTCCACATACCCAAACA
rJMSF019J21-          CCAATAACAAGGATCCTTAGAAGGATTGATCACCAGGCCAGCATTCCACATACCCAAACA
                      ____________________________________________________________
consensus             CCAATAACAAGGATCCTTAGAAGGATTGATCACCAGGCCAGCATTCCACATACCCAAACA
 
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rJMFF037E03-          ATGGGCACTTGTGCAGGAACAGAAGTGGACTTCATCCTCGATCTTGAAGCCTTGTATCTC
rJMSF019J21-          ATGGGCACTTGTGCAGGAACAGAAGTGGACTTCATCCTCGATCTTGAAGCCTTGTATCTC
                      ____________________________________________________________
consensus             ATGGGCACTTGTGCAGGAACAGAAGTGGACTTCATCCTCGATCTTGAAGCCTTGTATCTC
 
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rJMFF037E03-          TTGCCCATCATGGATTGGATGACCCAAATTCTATTAGTCCTACTTCCCACCTTTCCTTGA
rJMSF019J21-          TTGCCCATCATGGATTGGATGACCCAAATTCTATTAGTCCTACTTCCCACCTTTCCTTGA
                      ____________________________________________________________
consensus             TTGCCCATCATGGATTGGATGACCCAAATTCTATTAGTCCTACTTCCCACCTTTCCTTGA
 
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rJMFF037E03-          TTTTTGTTTTCTTGCCCTTCTTGGGGAACAACTCGCAGTGGAGTTGACTGGAGCAGGGGC
rJMSF019J21-          TTTTTGTTTTCTTGCCCTTCTTGGGGAACAACTCGCAGTGGAGTTGACTGGAGCAGGGGC
                      ____________________________________________________________
consensus             TTTTTGTTTTCTTGCCCTTCTTGGGGAACAACTCGCAGTGGAGTTGACTGGAGCAGGGGC
 
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rJMFF037E03-          AAAAGAATAAACAGGCATGTGATGCCCAGGAACCAATGCAGGGAACCCAACAGCAGGGAT
rJMSF019J21-          AAAAGAATAAACAGGCATGTGATGCCCAGGAACCAATGCAGGGAACCCAACAGCAGGGAT
                      ____________________________________________________________
consensus             AAAAGAATAAACAGGCATGTGATGCCCAGGAACCAATGCAGGGAACCCAACAGCAGGGAT
 
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rJMFF037E03-          TCCAACAGGAGCACAGCAGACTCCTGCATTGGCATGGAGGCACCAACAGCCTTGCTATTC
rJMSF019J21-          TCCAACAGGAGCACAGCAGACTCCTGCATTGGCATGGAGGCACCAACAGCCTTGCTATTC
                      ____________________________________________________________
consensus             TCCAACAGGAGCACAGCAGACTCCTGCATTGGCATGGAGGCACCAACAGCCTTGCTATTC
 
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rJMFF037E03-          TGCAAGGAAAAACGCAAAGNTTGATTTTCTGCAAGACAATACTGGAGCATTATCCCCAGC
rJMSF019J21-          TGCAAGGAAAAACGCAAAGTTTGATTTTCTGCAAGACAATACTGGAGCATTATCCCCAGC
                      ____________________________________________________________
consensus             TGCAAGGAAAAACGCAAAGTTTGATTTTCTGCAAGACAATACTGGAGCATTATCCCCAGC
 
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rJMFF037E03-          CTCCTGCATTCTGACTCATAGTATTTACTCTTCAACT                       
rJMSF019J21-          CTCCTGCATTCTGACTCATAGTATTTACTCTTCAACTCAAGATCCCTAACATGCGTTTTT
                      ____________________________________________________________
consensus             CTCCTGCATTCTGACTCATAGTATTTACTCTTCAACTCAAGATCCCTAACATGCGTTTTT
 
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rJMSF019J21-          TTCCTCTCTCGTGATCGGACCGCTGCATCCCTATTCCTTAGTTGTCGCTTGCGTTTCTTT
JMFN038M18+                                                  AGTTGTCGCTTGCGTTTCTTT
                      ____________________________________________________________
consensus             TTCCTCTCTCGTGATCGGACCGCTGCATCCCTATTCCTTAGTTGTCGCTTGCGTTTCTTT
 
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rJMSF019J21-          GCGATCGAATCATCATTGTCATCAGCGAGGACCTCGACAGCGTTATCCGCCTTTTGCTGA
JMFN038M18+           GCGATCGAATCATCATGTNCATCAGCGAGGACCTCGACAGCGTTATCCGCCTTTTGCTGA
                      ____________________________________________________________
consensus             GCGATCGAATCATCATTTTCATCAGCGAGGACCTCGACAGCGTTATCCGCCTTTTGCTGA
 
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rJMSF019J21-          A                                                           
JMFN038M18+           AACTGGTCAACCCGTTCCACTGTATCCCTCTCCTTTCCCTTGCCATCGTCCTCGACTTCG
JMFF037E03+                                                                GACTTCG
                      ____________________________________________________________
consensus             AACTGGTCAACCCGTTCCACTGTATCCCTCTCCTTTCCCTTGCCATCGTCCTCGACTTCG
 
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JMFN038M18+           GAGCCGCTAGATCCTTTGGTATCAGGAGTCCCAACGACTTCTCCAGAATGATCCGATTCC
JMFF037E03+           GAGCCGCTAGATCCTTTGGTATCAGGAGTCCCAACGACTTCTCCAGAATGATCCGATTCC
                      ____________________________________________________________
consensus             GAGCCGCTAGATCCTTTGGTATCAGGAGTCCCAACGACTTCTCCAGAATGATCCGATTCC
 
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JMFN038M18+           GCAATCCCAACCACCTCCCCAGAAGGAGCCGACGCCTGAGCTGGGGAATCGAGAAGTATT
JMFF037E03+           GCAATCCCAACCACCTCCCCAGAAGGAGCCGACGCCTGAGCTGGGGAATCGAGAAGTATT
                      ____________________________________________________________
consensus             GCAATCCCAACCACCTCCCCAGAAGGAGCCGACGCCTGAGCTGGGGAATCGAGAAGTATT
 
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JMSF019J21+                                                               CGATGTCC
JMFN038M18+           TCTGAGATGAAGTCGTCAGGAGCAGCATCATCGTCCTGCATCAAAATCTCCTCGATGTCC
JMFF037E03+           TCTGAGATGAAGTCGTCAGGAGCAGCATCATCGTCCTGCATCAAAATCTCCTCGATGTCC
                      ____________________________________________________________
consensus             TCTGAGATGAAGTCGTCAGGAGCAGCATCATCGTCCTGCATCAAAATCTCCTCGATGTCC
 
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JMSF019J21+           CCGATAGACAGAGGTAATGAATCCGGCGAAAGATTCGAAAACCCCTCGTCCACTGCTGCA
JMFN038M18+           CCGATAGACAGAGGTAATGAATCCGGCGAAAGATTCGAAAACCCCTCGTCCACTGCTGCA
JMFF037E03+           CCGATAGACAGAGGTAATGAATCCGGCGAAAGATTCGAAAACCCCTCGTCCACTGCTGCA
                      ____________________________________________________________
consensus             CCGATAGACAGAGGTAATGAATCCGGCGAAAGATTCGAAAACCCCTCGTCCACTGCTGCA
 
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JMSF019J21+           AATAAGAAATTGTCGTCATCAAGTAGACGATTCCAATCAAAATCTATGTTTTGCTCCCCT
JMFN038M18+           AATAAGAAATTGTCGTCATCAAGTAGACGATTCCAATCAAAATCTATGTTTTGCTCCCCT
JMFF037E03+           AATAAGAAATTGTCGTCATCAAGTAGACGATTCCAATCAAAATCTATGTTTTGCTCCCCT
                      ____________________________________________________________
consensus             AATAAGAAATTGTCGTCATCAAGTAGACGATTCCAATCAAAATCTATGTTTTGCTCCCCT
 
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JMSF019J21+           GGGATACTGCCATTATCAACCATCGCACATCGACAAGAGACAAGAGAATCAGGTACTGCA
JMFN038M18+           GGGATACTGCCATTATCAACCATCGCACATCGACAAGAGACAAGAGAATCAGGTACTGCA
JMFF037E03+           GGGATACTGCCATTATCAACCATCGCACATCGACAAGAGACAAGAGAATCAGGTACTGCA
                      ____________________________________________________________
consensus             GGGATACTGCCATTATCAACCATCGCACATCGACAAGAGACAAGAGAATCAGGTACTGCA
 
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JMSF019J21+           GAGCTAGTACGGATAAAATTGATAGATAACGAAAAGGGTTTC                  
JMFN038M18+           GAGCTAGTACGGATAAAATTGATAGATAACGAAAAGGGTTTCGAGAAAAATCATTTTTGA
JMFF037E03+           GAGCTAGTACGGATAAAGTTGATAGATAACGAAAAGGGTTTCGAGAAAAATCATTTTTGA
                      ____________________________________________________________
consensus             GAGCTAGTACGGATAAAATTGATAGATAACGAAAAGGGTTTCGAGAAAAATCATTTTTGA
 
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JMFN038M18+           GGGAGCAATTTATGGAGATGTGGAAGACAGCTTTTCTTCGAGGTGAAGGAGAGGCACT  
JMFF037E03+           GGGAGCAATTTATGGAGATGTGGAAGACAGCTTTTCTTCGAGGTGAAGGAGAGGCACTTT
                      ____________________________________________________________
consensus             GGGAGCAATTTATGGAGATGTGGAAGACAGCTTTTCTTCGAGGTGAAGGAGAGGCACTTT