Contig 001735:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F20Sequence603001735 (12)emb|CDO99450.1|3e-18unnamed protein product [Coffea canephora]656001735 (12)
JMFF023G22Sequence681001735 (12)
JMFF035O18Sequence653001735 (12)emb|CDO99450.1|5e-18unnamed protein product [Coffea canephora]755001735 (12)
JMFF036N16Sequence653001735 (12)emb|CDO99450.1|7e-18unnamed protein product [Coffea canephora]694001735 (12)
JMFN004I07Sequence638001735 (12)
JMFN015B18Sequence556001735 (12)
JMFN016A07Sequence610001735 (12)emb|CDO99450.1|1e-15unnamed protein product [Coffea canephora]
JMFN033F06Sequence215001735 (12)emb|CDO99450.1|4e-17unnamed protein product [Coffea canephora]
JMFN046H15Sequence546001735 (12)

Alignment

This contig is upended


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JMFN015B18+                                                            GATTAATGTAG
                      ____________________________________________________________
consensus                                                              GATTAATGTAG
 
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JMFN015B18+           GCTTTTATTAGTTTAACAAAGAATTGAAACCAATTTAAATATACAATATATGCAATACGA
JMFN004I07+                                 ATTGAAACCAATTTAAATATACAATATATGCAATACGA
rJMFF035O18-               TATTAGTTTAACAAAGAATTGAAACCAATTTAAATATACAATATATGCAATACGA
                      ____________________________________________________________
consensus             GCTTTTATTAGTTTAACAAAGAATTGAAACCAATTTAAATATACAATATATGCAATACGA
 
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JMFN015B18+           GTATACGACTCAGGCAACAACCTGGCCACTAACCTTATTTTTATGAAAAAAGATAATATA
JMFN004I07+           GTATACGACTCAGGCAACAACCTGGCCACTAACCTTATTTTTATGAAAAAAGATAATATA
rJMFF035O18-          GTATACGACTCAGGCAACAACCTGGCCACTAACCTTATTTTTATGAAAAAAGATAATATA
rJMFF023G22-                                        AACCTTATTTTTATGAAAAAAGATAATATA
rJMFF036N16-                                        AACCTTATTTTTATGAAAAAAGATAATATA
                      ____________________________________________________________
consensus             GTATACGACTCAGGCAACAACCTGGCCACTAACCTTATTTTTATGAAAAAAGATAATATA
 
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JMFN015B18+           ATAAAGACACTTATGTGTTTGGCCGGACTTGAGAAAGGAACAAAAAGTAGGGCACTTAAA
JMFN004I07+           ATAAAGACACTTATGTGTTTGGCCGGACTTGAGAAAGGAACAAAAAGTAGGGCACTTAAA
rJMFF035O18-          ATAAAGACACTTATGTGTTTGGCCGGACTTGAGAAAGGAACAAAAAGTAGGGCACTTAAA
rJMFF023G22-          ATAAAGACACTTATGTGTTTGGCCGGACTTGAGAAAGGAACAAAAAGTAGGGCACTTAAA
rJMFF036N16-          ATAAAGACACTTATGTGTTTGGCCGGACTTGAGAAAGGAACAAAAAGTAGGGCACTTAAA
                      ____________________________________________________________
consensus             ATAAAGACACTTATGTGTTTGGCCGGACTTGAGAAAGGAACAAAAAGTAGGGCACTTAAA
 
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JMFN015B18+           CCCAATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
JMFN004I07+           CCCAATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
rJMFF035O18-          CCCAATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
rJMFF023G22-          CCCAATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
rJMFF036N16-          CCCAATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
JMFN046H15+                                             TGTTACATGATTGTGCACCCAGATTC
rJMFF001F20-              ATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
                      ____________________________________________________________
consensus             CCCAATGATCATGACCTTTAAGTCTTATTATTATTGTTACATGATTGTGCACCCAGATTC
 
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JMFN015B18+           ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
JMFN004I07+           ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
rJMFF035O18-          ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
rJMFF023G22-          ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
rJMFF036N16-          ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
JMFN046H15+           ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
rJMFF001F20-          ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
                      ____________________________________________________________
consensus             ATTTTCTTCACTAAAGTATGTGTTATCGCATCTGCACCCCCCATAATAGCCTCTAGCCTG
 
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JMFN015B18+           TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
JMFN004I07+           TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
rJMFF035O18-          TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
rJMFF023G22-          TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
rJMFF036N16-          TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
JMFN046H15+           TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
rJMFF001F20-          TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
                      ____________________________________________________________
consensus             TCCACAACGACACCAATTTGGATAACTGTCGTAGCACGGCCGCGGTGGTGGCAGTGGTGG
 
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JMFN015B18+           AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
JMFN004I07+           AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
rJMFF035O18-          AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
rJMFF023G22-          AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
rJMFF036N16-          AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
JMFN046H15+           AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
rJMFF001F20-          AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
JMFN016A07+                                                        ACAGTACATCGGTGG
                      ____________________________________________________________
consensus             AGGTGGTGCAACCGGTGTTCCATACCATTCATAACTTGGCTCGTAACAGTACATCGGTGG
 
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JMFN015B18+           TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
JMFN004I07+           TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
rJMFF035O18-          TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
rJMFF023G22-          TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
rJMFF036N16-          TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
JMFN046H15+           TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
rJMFF001F20-          TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
JMFN016A07+           TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCNCCGGAGCCGGTACATTTGATAT
                      ____________________________________________________________
consensus             TGGAAATCCGTGAGTAACTGACATCATCGTCACTTGCCCCGGAGCCGGTACATTTGATAT
 
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JMFN015B18+           TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
JMFN004I07+           TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
rJMFF035O18-          TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
rJMFF023G22-          TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
rJMFF036N16-          TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
JMFN046H15+           TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
rJMFF001F20-          TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
JMFN016A07+           TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
                      ____________________________________________________________
consensus             TGGCTCCGGTTGCTTCATAGGCACCGGTACCCCCTCCGGTGCCGGAGGACCTTTGGGCTT
 
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JMFN015B18+           TTCTT                                                       
JMFN004I07+           TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
rJMFF035O18-          TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
rJMFF023G22-          TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
rJMFF036N16-          TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
JMFN046H15+           TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
rJMFF001F20-          TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
JMFN016A07+           TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
JMFF001F20+               TTGGGAGCNTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
JMFF035O18+               TTGGGAGCNTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCATC
JMFF036N16+               TTGGGAGCNTCTTTCGGCTNATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCATC
                      ____________________________________________________________
consensus             TTCTTTGGGAGCCTCTTTCGGCTTATCGGCATCTTTGGGCTTTTCGGACTTCTTGGCAT-
 
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JMFN004I07+           CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
rJMFF035O18-          CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
rJMFF023G22-          CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
rJMFF036N16-          CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
JMFN046H15+           CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
rJMFF001F20-          CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
JMFN016A07+           CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
JMFF001F20+           CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
JMFF035O18+           CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
JMFF036N16+           CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
                      ____________________________________________________________
consensus             CCTTGGGCTTATCGGCTTCGGGCTTGGGAGCGTCCTTGGGCTTATCGGCCTTGGGAGCTT
 
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JMFN004I07+           C                                                           
rJMFF035O18-          CTTTGGGCTTATCAGCCCTTGGGGAGCGTCTTTGGGCTTATCCGGCCTTGGGAACGTCTT
rJMFF023G22-          CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
rJMFF036N16-          CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
JMFN046H15+           CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
rJMFF001F20-          CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
JMFN016A07+           CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
JMFF001F20+           CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
JMFF035O18+           CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
JMFF036N16+           CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
                      ____________________________________________________________
consensus             CTTTGGGCTTATCAGCC--TTGGGAGCGTCTTTGGGCTTAT-CGGCCTTGGGAGCGTCTT
 
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rJMFF035O18-          TGGGCTTATCGGNCTTGGGAGCTTCTTTGGGCTTATCA                      
rJMFF023G22-          TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTT     
rJMFF036N16-          TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
JMFN046H15+           TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGC                            
rJMFF001F20-          TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
JMFN016A07+           TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
JMFF001F20+           TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
JMFF035O18+           TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
JMFF036N16+           TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
                      ____________________________________________________________
consensus             TGGGCTTATCGGCCTTGGGAGCTTCTTTGGGCTTATCAGCCTTTGGAGCTTCTTTGGGCT
 
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rJMFF036N16-          TTTCAGCA                                                    
rJMFF001F20-          TTTCAGCAGGTTTGGGTGGCTTGGGAGGATCAACAATCTCAATACTCTTAATCACACCAC
JMFN016A07+           TTTCAGCAGGTTTGGGTGGCTTGGGAGGATCAACAATCTCAATACTCTTAATCACACCAC
JMFF001F20+           TTTCAGCAGGTTTGGGTGGCTTGGGAGGATCAACAATCTCAATACTCTTAATCACACCAC
JMFF035O18+           TTTCAGCAGGTTTGGGTGGCTTGGGAGGATCAACAATCTCAATACTCTTAATCACACCAC
JMFN033F06+                                      GATCAACAATCTCAATACTCTTAATCACACCAC
JMFF036N16+           TTTCAGCAGGTTTGGGTGGCTTGGGAGGATCAACAATCTCAATACTCTTAATCACACCAC
                      ____________________________________________________________
consensus             TTTCAGCAGGTTTGGGTGGCTTGGGAGGATCAACAATCTCAATACTCTTAATCACACCAC
 
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rJMFF001F20-          CTCC                                                        
JMFN016A07+           CTCCCTTATAGCACAATTTGTCACGGATCTTCTCAGGGCTACAGCAAACCACTGTGATCC
JMFF001F20+           CTCCCTTATAGCACAATTTGTCACGGATCTTCTCAGGGCTACAGCAAACCACTGTGATCC
JMFF035O18+           CTCCCTTATAGCACAATTTGTCACGGATCTTCTCAGGGCTACAGCAAACCACTGTGATCC
JMFN033F06+           CTCCCTTATAGCACAATTTGTCACGGATCTTCTCAGGGCTACAGCAAACCACTGTGATCC
JMFF036N16+           CTCCCTTATAGCACAATTTGTCACGGATCTTCTCAGGGCTACAGCAAACCACTGTGATCC
                      ____________________________________________________________
consensus             CTCCCTTATAGCACAATTTGTCACGGATCTTCTCAGGGCTACAGCAAACCACTGTGATCC
 
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JMFN016A07+           TCACCTTATTTTCCTCCTCATTGTATATTTGGTCTCTGATTTGAGGAATTTTGCAAATGA
JMFF001F20+           TCACCTTATTTTCCTCCTCATTGTATATTTGGTCTCTGATTTGAGGAATTTTGCAAATGA
JMFF035O18+           TCACCTTATTTTCCTCCTCATTGTATATTTGGTCTCTGATTTGAGGAATTTTGCAAATGA
JMFN033F06+           TCACCTTATTTTCCTCCTCATTGTATATTTGGTCTCTGATTTGAGGAATTTTGCAAATGA
JMFF036N16+           TCACCTTATTTTCCTCCTCATTGTATATTTGGTCTCTGATTTGAGGAATTTTGCAAATGA
                      ____________________________________________________________
consensus             TCACCTTATTTTCCTCCTCATTGTATATTTGGTCTCTGATTTGAGGAATTTTGCAAATGA
 
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JMFN016A07+           CTTTTTTGACCTTCTTGTAGCAGCTGGAGCACTTGAGATCAACACTCAGGAACATCACA 
JMFF001F20+           CTTTTTTGACCTTCTTGTAGCAGCTGGAGCACTTGAGATCAACACTCAGGAACATCACAG
JMFF035O18+           CTTTTTTGACCTTCTTGTAGCAGCTGGAGCACTTGAGATCAACACTCAGGAACATCACAG
JMFN033F06+           CTTTTTTGACCTTCTTGTAGCAGCTGGAGCACTTGAGATCAACACTCAGGAACATCACAG
JMFF036N16+           CTTTTTTGACCTTCTTGTAGCAGCTGGAGCACTTGAGATCAACACTCAGGAACATCACAG
                      ____________________________________________________________
consensus             CTTTTTTGACCTTCTTGTAGCAGCTGGAGCACTTGAGATCAACACTCAGGAACATCACAG
 
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JMFF001F20+           TGGTCTTTTCAGGAGCCATTGCTGATAGCTGAGATCGAGCAGATGATAAGTTGTGGAAGT
JMFF035O18+           TGGTCTTTTCAGGAGCCATTGCTGATAGCTGAGATCGAGCAGATGATAAGTTGTGGAAGT
JMFF036N16+           TGGTCTTTTCAGGAGCCATTGCTGATAGCTGAGATCGAGCAGATGATAAGTTGTGGAAGT
                      ____________________________________________________________
consensus             TGGTCTTTTCAGGAGCCATTGCTGATAGCTGAGATCGAGCAGATGATAAGTTGTGGAAGT
 
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JMFF001F20+           AAATCTGCAGAAAATTTAAGAGAGAGAAAGAGAAATGGGTTTAGGAAGAAGGAGAAGAAG
JMFF035O18+           AAATCTGCAGAAAATTTAAGAGAGAGAAAGAGAAATGGGTTTAGGAAGAAGGAGAAGAAG
JMFF036N16+           AAATCTGCAGAAAATTTAAGAGAGAGAAAGAGAAATGGGTTTAGGAAGAAGGAGAAGAAG
                      ____________________________________________________________
consensus             AAATCTGCAGAAAATTTAAGAGAGAGAAAGAGAAATGGGTTTAGGAAGAAGGAGAAGAAG
 
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JMFF001F20+           AGTATGAAAGT                                                 
JMFF035O18+           AGTATGAAAGTGAGGAGAAAGGAGTGTTGAGATTGATGATATCATCAAGGAAAAGAAGAT
JMFF036N16+           AGTATGAAAGTGAGGAGAAAGGAGTGTTGAGATTGATGATACCATCAAGGAAAAGAAGAT
                      ____________________________________________________________
consensus             AGTATGAAAGTGAGGAGAAAGGAGTGTTGAGATTGATGATATCATCAAGGAAAAGAAGAT